EWM26519.1, cds4154 (CDS) Nannochloropsis gaditana

Overview
NameEWM26519.1
Unique Namecds4154
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1021214..1021234 -
Alignment locationCM002462.1:1020744..1020867 -
Alignment locationCM002462.1:1020370..1020572 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26519.1
Product3-demethylubiquinone-9 3-methyltransferase
Orig transcript idgnl|cribi|Naga_100398g3.1308.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1021214..1021234 -
CM002462.1supercontigCM002462.1:1020744..1020867 -
CM002462.1supercontigCM002462.1:1020370..1020572 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006744ubiquinone biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:00084252-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR010233UbiG_MeTrfase
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|585108594|gb|EWM26519.1| (3-demethylubiquinone-9 3-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 238.424 bits (607), Expect = 1.158e-79
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
Query:    1 MLVETEEHSKSRGDGKGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLKGERGQGQRGKA 115
            MLVETEEHSKSRGDGKGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLKGERGQGQRGKA
Sbjct:    1 MLVETEEHSKSRGDGKGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLKGERGQGQRGKA 115          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|1176033240|gb|OQX31499.1| (bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC14_002_19_P1] >gi|1176035392|gb|OQX33210.1| bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC13016_P6] >gi|1176035625|gb|OQX33388.1| bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC13013_P4] >gi|1176043624|gb|OQX40185.1| bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC13015_P5] >gi|1176051674|gb|OQX46420.1| bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC13018_P8] >gi|1176053253|gb|OQX47572.1| bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC004_P11] >gi|1176055067|gb|OQX48970.1| bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase [Gammaproteobacteria bacterium LUC006_P13])

HSP 1 Score: 109.768 bits (273), Expect = 2.115e-27
Identity = 46/90 (51.11%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   16 KGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAM-CLK 104
             GGR+  +T+NR  K+YL A++GAEY+ R++PRGTH++ KF++P E+ R   DAGL  E +TGL+YNP+T  +RLD  D+DVN+ + C K
Sbjct:  145 PGGRIFFSTLNRNPKSYLFAIIGAEYLLRLLPRGTHEFAKFIRPSELDRWIRDAGLHAEQMTGLVYNPLTGHYRLDPRDVDVNYMVSCAK 234          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|949143740|gb|KRP19371.1| (3-demethylubiquinone-9 3-methyltransferase [SAR92 bacterium BACL16 MAG-120619-bin48])

HSP 1 Score: 109.768 bits (273), Expect = 2.415e-27
Identity = 45/97 (46.39%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    8 HSKSRGDGKGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLK 104
            H+ +     GG V  +TINR  K+YLLAV+G EYI R++P+GTH++ KF++P E+ +   +AGL ++ +TGL YNP+T T+RL ++D+DVN+ +C +
Sbjct:  142 HACAAMTKPGGTVFFSTINRNPKSYLLAVIGVEYILRMLPKGTHEYSKFIRPAELGKWIREAGLEIDQMTGLTYNPLTKTYRLTESDVDVNYMICAR 238          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|949149464|gb|KRP23763.1| (3-demethylubiquinone-9 3-methyltransferase [SAR92 bacterium BACL16 MAG-120322-bin99])

HSP 1 Score: 109.768 bits (273), Expect = 2.549e-27
Identity = 45/97 (46.39%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    8 HSKSRGDGKGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLK 104
            H+ +     GG V  +TINR  K+YLLAV+G EYI R++P+GTH++ KF++P E+ +   +AGL ++ +TGL YNP+T T+RL ++D+DVN+ +C +
Sbjct:  142 HACAAMTKPGGTVFFSTINRNPKSYLLAVIGVEYILRMLPKGTHEYSKFIRPAELGKWIREAGLEIDQMTGLTYNPLTKTYRLTESDVDVNYMICAR 238          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|759381449|ref|WP_043107944.1| (bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [endosymbiont of unidentified scaly snail isolate Monju] >gi|530670797|dbj|BAN69213.1| 2-polyprenyl-6-hydroxyphenyl methylase/3-demethylubiquinone-9 3-methyltransferase [endosymbiont of unidentified scaly snail isolate Monju])

HSP 1 Score: 108.227 bits (269), Expect = 8.827e-27
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 0
Query:   16 KGGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLK 104
             GG V  +TINR  K+YL A++GAEY+ R++PRGTH + +F++P E+A    DAGL VED+ G+ YNP T  +RL+  D+DVN+ M  +
Sbjct:  146 PGGTVCFSTINRNPKSYLFAIVGAEYLLRLLPRGTHDYARFIRPSELAHWARDAGLAVEDLCGMTYNPFTGVYRLEARDVDVNYLMACR 234          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|499630724|ref|WP_011311458.1| (bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [Thiobacillus denitrificans] >gi|109895925|sp|Q3SK91.1|UBIG_THIDA RecName: Full=Ubiquinone biosynthesis O-methyltransferase; AltName: Full=2-polyprenyl-6-hydroxyphenol methylase; AltName: Full=3-demethylubiquinone 3-O-methyltransferase >gi|74056459|gb|AAZ96899.1| ubiquinone biosynthesis O-methyltransferase [Thiobacillus denitrificans ATCC 25259])

HSP 1 Score: 107.071 bits (266), Expect = 1.672e-26
Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   17 GGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLKGE 106
            GG V  +T+NR  K+YLLAV+GAEYI +++PRGTH + KF++P E+ARM  +AGL  E++TG+ YNP+T  +RL+  D DVN+ M  + E
Sbjct:  143 GGWVFFSTLNRNAKSYLLAVVGAEYILKLLPRGTHDYAKFIKPAELARMAREAGLETEELTGMTYNPLTKVYRLEA-DTDVNYLMATRRE 231          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|771562043|ref|WP_045195398.1| (bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp. 2(2015)] >gi|770102451|gb|KJK19561.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas sp. 2(2015)] >gi|1087055422|emb|SDQ48697.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas sp. UC 17F4])

HSP 1 Score: 107.071 bits (266), Expect = 2.008e-26
Identity = 47/85 (55.29%), Postives = 66/85 (77.65%), Query Frame = 0
Query:   17 GGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAM 101
            GG+V L+TINR  KAYL A++GAEYI +++PRGTH +KKF++P E+     DAGL V+D+TGL YNP+T  ++L  ND+DVN+ +
Sbjct:  143 GGQVFLSTINRNPKAYLFAIIGAEYIMKLLPRGTHDFKKFIRPSELGAWSRDAGLTVKDITGLTYNPLTKHYKL-ANDVDVNYMI 226          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|931473787|gb|KPK55299.1| (3-demethylubiquinone-9 3-methyltransferase [Gammaproteobacteria bacterium SG8_31])

HSP 1 Score: 107.071 bits (266), Expect = 2.015e-26
Identity = 42/87 (48.28%), Postives = 67/87 (77.01%), Query Frame = 0
Query:   17 GGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCL 103
            GG+V  +TINR  K+YL A++GAEY+  ++P+GTH ++KF++P E+ R   ++GL++ED+TG+ YNP+T T+RL  +D+DVN+  C 
Sbjct:  147 GGKVFFSTINRNPKSYLFAIIGAEYLLHLLPKGTHDYRKFIRPSELERWARNSGLQIEDITGMTYNPLTRTYRL-GDDVDVNYLACF 232          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|518792992|ref|WP_019950281.1| (bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [Kushneria aurantia])

HSP 1 Score: 107.071 bits (266), Expect = 2.250e-26
Identity = 43/85 (50.59%), Postives = 65/85 (76.47%), Query Frame = 0
Query:   17 GGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAM 101
            GG V  +TINR  K++ +A++GAEY+  ++PRGTH +++F++P E+AR   +AGL V D+TGL+YNP+T  +RL  +DIDVN+ M
Sbjct:  147 GGHVFFSTINRNPKSWAMAIVGAEYVLNLLPRGTHSYQRFIRPSELARWARNAGLEVRDITGLVYNPLTRHYRLSDSDIDVNYFM 231          
BLAST of EWM26519.1 vs. NCBI_GenBank
Match: gi|1086315766|emb|SDA10946.1| (3-demethylubiquinone-9 3-methyltransferase [Nitrosospira sp. Nsp18])

HSP 1 Score: 107.071 bits (266), Expect = 2.505e-26
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   17 GGRVVLTTINRTVKAYLLAVLGAEYIARIIPRGTHQWKKFLQPQEIARMGADAGLRVEDVTGLIYNPITNTWRLDKNDIDVNFAMCLKG 105
            GG V  +TINR  K+YL A++GAEY+  ++PRGTH + KF++P E+ARMG DAGL VE++ GL YNPIT  + L + D DVN+ M  + 
Sbjct:  151 GGWVFFSTINRNPKSYLFAIIGAEYVLSLLPRGTHDYAKFIKPSELARMGRDAGLAVEEIIGLTYNPITKVYALGQ-DSDVNYIMAFRA 238          
The following BLAST results are available for this feature:
BLAST of EWM26519.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108594|gb|EWM26519.1|1.158e-79100.003-demethylubiquinone-9 3-methyltransferase [Nannoc... [more]
gi|1176033240|gb|OQX31499.1|2.115e-2751.11bifunctional 3-demethylubiquinol 3-O-methyltransfe... [more]
gi|949143740|gb|KRP19371.1|2.415e-2746.393-demethylubiquinone-9 3-methyltransferase [SAR92 ... [more]
gi|949149464|gb|KRP23763.1|2.549e-2746.393-demethylubiquinone-9 3-methyltransferase [SAR92 ... [more]
gi|759381449|ref|WP_043107944.1|8.827e-2749.44bifunctional 3-demethylubiquinone 3-O-methyltransf... [more]
gi|499630724|ref|WP_011311458.1|1.672e-2652.22bifunctional 3-demethylubiquinone 3-O-methyltransf... [more]
gi|771562043|ref|WP_045195398.1|2.008e-2655.29bifunctional 3-demethylubiquinone 3-O-methyltransf... [more]
gi|931473787|gb|KPK55299.1|2.015e-2648.283-demethylubiquinone-9 3-methyltransferase [Gammap... [more]
gi|518792992|ref|WP_019950281.1|2.250e-2650.59bifunctional 3-demethylubiquinone 3-O-methyltransf... [more]
gi|1086315766|emb|SDA10946.1|2.505e-2652.813-demethylubiquinone-9 3-methyltransferase [Nitros... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4164rna4164Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications