EWM26522.1, cds4151 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|585108599|gb|EWM26522.1| (cullin protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 279.641 bits (714), Expect = 2.747e-95 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKVREDRREGGR 138
MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKVREDRREGGR
Sbjct: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKVREDRREGGR 138
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|298711209|emb|CBJ32430.1| (CULlin protein 1 [Ectocarpus siliculosus]) HSP 1 Score: 198.749 bits (504), Expect = 9.429e-58 Identity = 95/129 (73.64%), Postives = 110/129 (85.27%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLF+R+P GL PMA+I++ HI MGNE+I +REA+I E GEKDTNQDPNFVK LL+LHDK++ VVN QF NSL KALKEAFV+FVN+DVGKFKNADL+ SFCDRILK GGEKLGDAEVE +L KV
Sbjct: 295 MYRLFNRLPKGLEPMAEIIKDHITEMGNEIIKRREAKI-EGGEKDTNQDPNFVKELLALHDKYMAVVNDQFAGNSLLQKALKEAFVDFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKV 422
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|676378097|ref|XP_009032327.1| (hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens] >gi|323456805|gb|EGB12671.1| hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens]) HSP 1 Score: 199.904 bits (507), Expect = 1.183e-57 Identity = 95/129 (73.64%), Postives = 112/129 (86.82%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLFSRVP+GL PMA +V+AHIE MGNEVIN+REAR+ E GEKD+NQDP FVK LL+LHDK++ VV+AQF N+LF KALKEAFVEF N+DVGKF NA+L+SSFCDRILK GGEKL D +VE++LEK
Sbjct: 293 MYRLFSRVPNGLPPMAALVRAHIEAMGNEVINRREARL-EAGEKDSNQDPAFVKELLALHDKYMAVVSAQFAGNALFQKALKEAFVEFTNRDVGKFTNAELMSSFCDRILKSGGEKLSDEDVESYLEKT 420
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|298706020|emb|CBJ29134.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 160.999 bits (406), Expect = 1.174e-44 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 0
Query: 2 YRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
YRLF+R+P GL PMA+I++ HI M NE+I + A+I E GEKD NQDPNFVK LL+LH K++ VVN QF NSL KAL AFV FVN+DVGKFKNADL+ SFCDRI+K GGEKLGD VE +L KV
Sbjct: 33 YRLFNRLPKGLEPMAEIIKDHITEMRNEIIKRPGAKI-EGGEKDINQDPNFVKELLALHGKYMAVVNDQFVGNSLLQKAL--AFVGFVNRDVGKFKNADLMCSFCDRIMKTGGEKLGD--VEEYLAKV 155
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|673027716|ref|XP_008867819.1| (hypothetical protein H310_05001 [Aphanomyces invadans] >gi|574476592|gb|ETW03590.1| hypothetical protein H310_05001 [Aphanomyces invadans]) HSP 1 Score: 162.54 bits (410), Expect = 5.228e-44 Identity = 79/129 (61.24%), Postives = 99/129 (76.74%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLFSRVP GL P+A +V+ H+E +GN++++ R I + KD + DP F+K +L+LHDK+V VV QF NSLF KALKEAFVEFVNKDVGK +A L+S+FCDRILK GGEKL D +VE +LEKV
Sbjct: 291 MYRLFSRVPEGLAPIAALVRRHVEAVGNQIVDLRTQAITTDNIKDPSADPAFIKEILALHDKYVKVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSAKLMSTFCDRILKSGGEKLSDTQVEEYLEKV 419
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|698810158|ref|XP_009838108.1| (hypothetical protein H257_12555 [Aphanomyces astaci] >gi|574106911|gb|ETV72426.1| hypothetical protein H257_12555 [Aphanomyces astaci]) HSP 1 Score: 162.155 bits (409), Expect = 9.503e-44 Identity = 80/129 (62.02%), Postives = 99/129 (76.74%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLFSRVP GL P+A +V+ HIE +GN++++ R I + KD + DP F+K +L+LHDK+V VV QF NSLF KALKEAFVEFVNKDVGK +A L+S+FCDRILK GGEKL D +VE +LEKV
Sbjct: 292 MYRLFSRVPEGLAPIAVLVRRHIEAVGNQIVDLRTQAIVSDNIKDPSADPAFIKEILALHDKYVKVVQDQFGGNSLFQKALKEAFVEFVNKDVGKDCSAKLMSTFCDRILKSGGEKLSDVQVEEYLEKV 420
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|669138794|ref|XP_008604965.1| (hypothetical protein SDRG_01226 [Saprolegnia diclina VS20] >gi|530743009|gb|EQC41251.1| hypothetical protein SDRG_01226 [Saprolegnia diclina VS20]) HSP 1 Score: 161.384 bits (407), Expect = 1.488e-43 Identity = 79/129 (61.24%), Postives = 98/129 (75.97%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLFSRVP GL P+A +V+ HIE +GNE++ +R A I + KD + DP F+K +L+LHDK+ VV QF NSLF KALKEAFVEFVNKDVGK +A L+S+FCDRILK GGEKL D +VE +L K+
Sbjct: 293 MYRLFSRVPEGLAPIATLVRRHIETVGNEIVERRTAAIASDNIKDPSSDPTFIKDILALHDKYKLVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSAKLMSTFCDRILKSGGEKLSDDQVEEYLVKI 421
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|1173949084|gb|OQR97158.1| (CULlin protein 1 [Achlya hypogyna]) HSP 1 Score: 160.999 bits (406), Expect = 2.134e-43 Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
M+RLFSRVP GL P+A +V+ HIE +GNE++ +R A I + KD DP F+K +L+LHDK+ VV QF NSLF KALKEAFVEFVNKDVGK +A L+S+FCDRILK GGEKL D +VE+ L+K+
Sbjct: 293 MFRLFSRVPEGLAPIATLVRRHIETVGNEIVERRTAAIASDNIKDPASDPTFIKDILALHDKYKQVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSAKLMSTFCDRILKSGGEKLSDDQVEDFLQKI 421
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|813109733|ref|XP_012194667.1| (hypothetical protein SPRG_01077 [Saprolegnia parasitica CBS 223.65] >gi|641541251|gb|KDO35014.1| hypothetical protein SPRG_01077 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 160.229 bits (404), Expect = 4.895e-43 Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLFSRVP GL P+A +V+ HIE +GNE++ +R A I + KD + DP F+K +L+LHDK+ VV QF NSLF KALKEAFVEFVNKDVGK +A L+S+FCDRILK GGEKL D +VE L K+
Sbjct: 293 MYRLFSRVPDGLAPIATLVRRHIETVGNEIVERRTAAIASDNIKDPSSDPTFIKDILALHDKYKLVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSAKLMSTFCDRILKSGGEKLSDDQVEEFLLKI 421
BLAST of EWM26522.1 vs. NCBI_GenBank
Match: gi|567948654|gb|ETK74397.1| (hypothetical protein L915_18816 [Phytophthora parasitica] >gi|567977322|gb|ETL27827.1| hypothetical protein L916_18712 [Phytophthora parasitica] >gi|568036664|gb|ETM34268.1| hypothetical protein L914_18630 [Phytophthora parasitica]) HSP 1 Score: 157.532 bits (397), Expect = 3.679e-42 Identity = 73/129 (56.59%), Postives = 97/129 (75.19%), Query Frame = 0
Query: 1 MYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKV 129
MYRLF+R+ +GL P+A +VQ HI +GN+++ +R + +D + DP F+K +L++HDKF +VN QF NSLF KALKEAFVEFVNKDVG +A L+S+FCDRILK GGEKL D +VE++LEKV
Sbjct: 293 MYRLFARLKNGLEPIADLVQQHITAVGNDIVAKRANAVASGNVRDPSSDPTFIKDILAIHDKFRSIVNEQFAGNSLFQKALKEAFVEFVNKDVGPDSSAKLMSTFCDRILKTGGEKLSDEQVEDYLEKV 421 The following BLAST results are available for this feature:
BLAST of EWM26522.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|