EWM26533.1, cds4142 (CDS) Nannochloropsis gaditana

Overview
NameEWM26533.1
Unique Namecds4142
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:989580..992006 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26533.1
Productpoly polymerase gamma
Orig transcript idgnl|cribi|Naga_100141g10.8380.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:989580..992006 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0031123RNA 3'-end processing
GO:0043631RNA polyadenylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
GO:0016779nucleotidyltransferase activity
GO:0003723RNA binding
GO:0004652polynucleotide adenylyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR011068NuclTrfase_I_C
IPR002110Ankyrin_rpt
IPR014492PolyA_polymerase
IPR002934Nucleotidyltransferase
IPR020683Ankyrin_rpt-contain_dom
IPR007010PolA_pol_RNA-bd_dom
IPR007012PolA_pol_cen_dom
Homology
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|585108611|gb|EWM26533.1| (poly polymerase gamma [Nannochloropsis gaditana])

HSP 1 Score: 1639.78 bits (4245), Expect = 0.000e+0
Identity = 808/808 (100.00%), Postives = 808/808 (100.00%), Query Frame = 0
Query:    1 MSTAGQPLKRAVLEQLLPVVSNDAGDPKTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGGHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEFIRKWRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRKERGKGKEGRKKGQKRAREEEGEEEGEEEGKAGMEKRRGEEGEAGEGEEDETEGFTPLHMAAYTGELESVKALTREEEEGGKEEGRKGGREGLVAVKGVDALDAQGRTPAQVARERGFDEVAMYLEGLMAAKGEGGREGGAGSGAEEERRVVPTQFLPPLDGNAEYDDADDEVLGAAEAAMEQAMEAEEGGEGEEKRQEGEEEEEASRKKAALMSLQLVMKEEELKLDPVIPPWRKRSLVLSSGGGGERTRALIRTPVVMDLTLEEGEGKV 808
            MSTAGQPLKRAVLEQLLPVVSNDAGDPKTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGGHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEFIRKWRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRKERGKGKEGRKKGQKRAREEEGEEEGEEEGKAGMEKRRGEEGEAGEGEEDETEGFTPLHMAAYTGELESVKALTREEEEGGKEEGRKGGREGLVAVKGVDALDAQGRTPAQVARERGFDEVAMYLEGLMAAKGEGGREGGAGSGAEEERRVVPTQFLPPLDGNAEYDDADDEVLGAAEAAMEQAMEAEEGGEGEEKRQEGEEEEEASRKKAALMSLQLVMKEEELKLDPVIPPWRKRSLVLSSGGGGERTRALIRTPVVMDLTLEEGEGKV
Sbjct:    1 MSTAGQPLKRAVLEQLLPVVSNDAGDPKTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGGHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEFIRKWRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRKERGKGKEGRKKGQKRAREEEGEEEGEEEGKAGMEKRRGEEGEAGEGEEDETEGFTPLHMAAYTGELESVKALTREEEEGGKEEGRKGGREGLVAVKGVDALDAQGRTPAQVARERGFDEVAMYLEGLMAAKGEGGREGGAGSGAEEERRVVPTQFLPPLDGNAEYDDADDEVLGAAEAAMEQAMEAEEGGEGEEKRQEGEEEEEASRKKAALMSLQLVMKEEELKLDPVIPPWRKRSLVLSSGGGGERTRALIRTPVVMDLTLEEGEGKV 808          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|695377125|ref|XP_009515939.1| (hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae] >gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae])

HSP 1 Score: 407.527 bits (1046), Expect = 6.386e-128
Identity = 225/542 (41.51%), Postives = 309/542 (57.01%), Query Frame = 0
Query:   12 VLEQLLPVVSNDAGDPK---TAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWE-QGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGGHDGGSEAWHAAQ---------CFYIGLSFDKEEMERRKVGKEVFVGEFIRK--WRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRK 538
            VLEQ    +     +PK    +A LQ+F+  H P ES+    RR   + ELRS+F  W+K  C  K +PEE+ A AGG++ + GSY+L V+EPGADID  CV P H++REDFF+S  +   QHPKV +L +   A VPI++F  + ++ D+  A LP  S+   +++ +D +L GVD  T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL   WKWP  ++LCK  DA LG  VW    G +R ++MPI+TPAYP+ NS++NVS  +L+VMK EF RG  ++   L+      G E         W  L EPSDFF  +  YLAV+++    E EAAW G  ESR+R LV+ L   P     L  +      FP +F     GG     E  + A          CFY+G   D+ ++  R+V  +  V  F     +R+   TP              DV V+ V W+ LP +VFE +GG  +AR  RR+
Sbjct:   12 VLEQAYKAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTP--NRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNN-WKWPLAIQLCKTHDANLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKG----GSE---------WGPLFEPSDFFAVHQHYLAVEVYTEKQEEEAAWCGFCESRMRKLVESLAYNP----ALCRLRAYTKKFPLSF---VTGGEAPAGEQPNGAALAQPSKFGVCFYVGFDIDRRQLRSREVSIDNSVEYFKNNDLYRWNKRTP------------TMDVRVTPVVWKALPESVFEDMGGRAVARVARRE 518          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|566020562|gb|ETI43473.1| (hypothetical protein F443_11577 [Phytophthora parasitica P1569] >gi|568046320|gb|ETM43431.1| hypothetical protein L914_11098 [Phytophthora parasitica])

HSP 1 Score: 400.979 bits (1029), Expect = 1.999e-125
Identity = 218/543 (40.15%), Postives = 306/543 (56.35%), Query Frame = 0
Query:   12 VLEQLLPVVSNDAGDPK---TAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWE-QGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGG-------HDGGSEAWHAAQ---CFYIGLSFDKEEMERRKVGKEVFVGEFIRK--WRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRK 538
            VLEQ    +     +PK    +A LQTF+  H P ES+    RR   + ELRS+F  W+K  C  K +PEE+ A AGG++ + GSY+L V+EPGADID  CV P H++REDFF+S  +   +HPKV  L +   A VP+++F  + ++ D+  A LP  S+   +++ +D +L GVD  T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL   WKWP  ++LCK  DA LG  VW    G +R ++MPI+TPAYP+ NS++NVS  +L+VMK EF RG  ++   L+      G E         W  L EPS+FF  +  YLAV+++    E E AW    ESR+R LV+ L           P    + +F + FP  +  G          G      ++   CFY+G   D+ ++  R+V  +  V  F     +R+   TP              DV V+ V W+ LP +VFE +GG  +AR  RR+
Sbjct:   12 VLEQAYKAIRTTPPEPKDLEQSAKLQTFMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTP--NRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNN-WKWPLAIQLCKTHDANLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLAVMKEEFKRGLTIVQDVLSKG----GSE---------WGPLFEPSEFFAIHQHYLAVEVYTENQEEEQAWCSFCESRMRKLVESL--------AYNPALCRLRVFTKKFPLTYVTGGEPPAGEQSNGQPPAQPSKFGVCFYVGFDIDRRQLRSREVSIDSSVDYFKNNDLYRWNKRTP------------TMDVRVTPVLWKALPESVFEDMGGRTVARVARRE 518          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|567957962|gb|ETK83556.1| (hypothetical protein L915_11262 [Phytophthora parasitica] >gi|567986652|gb|ETL36970.1| hypothetical protein L916_11161 [Phytophthora parasitica] >gi|568015965|gb|ETL90142.1| hypothetical protein L917_11060 [Phytophthora parasitica] >gi|570324194|gb|ETO72142.1| hypothetical protein F444_11652 [Phytophthora parasitica P1976] >gi|570948041|gb|ETP13298.1| hypothetical protein F441_11488 [Phytophthora parasitica CJ01A1] >gi|570980797|gb|ETP41346.1| hypothetical protein F442_11475 [Phytophthora parasitica P10297])

HSP 1 Score: 400.593 bits (1028), Expect = 3.295e-125
Identity = 218/543 (40.15%), Postives = 306/543 (56.35%), Query Frame = 0
Query:   12 VLEQLLPVVSNDAGDPK---TAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWE-QGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGG-------HDGGSEAWHAAQ---CFYIGLSFDKEEMERRKVGKEVFVGEFIRK--WRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRK 538
            VLEQ    +     +PK    +A LQTF+  H P ES+    RR   + ELRS+F  W+K  C  K +PEE+ A AGG++ + GSY+L V+EPGADID  CV P H++REDFF+S  +   +HPKV  L +   A VP+++F  + ++ D+  A LP  S+   +++ +D +L GVD  T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL   WKWP  ++LCK  DA LG  VW    G +R ++MPI+TPAYP+ NS++NVS  +L+VMK EF RG  ++   L+      G E         W  L EPS+FF  +  YLAV+++    E E AW    ESR+R LV+ L           P    + +F + FP  +  G          G      ++   CFY+G   D+ ++  R+V  +  V  F     +R+   TP              DV V+ V W+ LP +VFE +GG  +AR  RR+
Sbjct:   12 VLEQAYKAIRTTPPEPKDLEQSAKLQTFMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTP--NRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNN-WKWPLAIQLCKTHDANLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLAVMKEEFKRGLTIVQDVLSKG----GSE---------WGPLFEPSEFFAIHQHYLAVEVYTENQEEEQAWCSFCESRMRKLVESL--------AYNPALCRLRVFTKKFPLTYVTGGEPPAGEQSNGQPPAQPSKFGVCFYVGFDIDRRQLRSREVSIDSSVDYFKNNDLYRWNKRTP------------TMDVRVTPVLWKALPESVFEDMGGRTVARVARRE 518          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|675197643|ref|XP_008907706.1| (hypothetical protein PPTG_13623 [Phytophthora parasitica INRA-310] >gi|568092521|gb|ETN07330.1| hypothetical protein PPTG_13623 [Phytophthora parasitica INRA-310] >gi|970656513|gb|KUF94514.1| Aquaporin-10 [Phytophthora nicotianae])

HSP 1 Score: 400.208 bits (1027), Expect = 3.824e-125
Identity = 218/543 (40.15%), Postives = 306/543 (56.35%), Query Frame = 0
Query:   12 VLEQLLPVVSNDAGDPK---TAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWE-QGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGG-------HDGGSEAWHAAQ---CFYIGLSFDKEEMERRKVGKEVFVGEFIRK--WRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRK 538
            VLEQ    +     +PK    +A LQTF+  H P ES+    RR   + ELRS+F  W+K  C  K +PEE+ A AGG++ + GSY+L V+EPGADID  CV P H++REDFF+S  +   +HPKV  L +   A VP+++F  + ++ D+  A LP  S+   +++ +D +L GVD  T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL   WKWP  ++LCK  DA LG  VW    G +R ++MPI+TPAYP+ NS++NVS  +L+VMK EF RG  ++   L+      G E         W  L EPS+FF  +  YLAV+++    E E AW    ESR+R LV+ L           P    + +F + FP  +  G          G      ++   CFY+G   D+ ++  R+V  +  V  F     +R+   TP              DV V+ V W+ LP +VFE +GG  +AR  RR+
Sbjct:   12 VLEQAYKAIRTTPPEPKDLEQSAKLQTFMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTP--NRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNN-WKWPLAIQLCKTHDANLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLAVMKEEFKRGLTIVQDVLSKG----GSE---------WGPLFEPSEFFAIHQHYLAVEVYTENQEEEQAWCSFCESRMRKLVESL--------AYNPALCRLRVFTKKFPLTYVTGGEPPAGEQSNGQPPAQPSKFGVCFYVGFDIDRRQLRSREVSIDSSVDYFKNNDLYRWNKRTP------------TMDVGVTPVLWKALPESVFEDMGGRTVARVARRE 518          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|301118192|ref|XP_002906824.1| (Poly(A) polymerase, putative [Phytophthora infestans T30-4] >gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 395.971 bits (1016), Expect = 1.756e-123
Identity = 215/543 (39.59%), Postives = 306/543 (56.35%), Query Frame = 0
Query:   12 VLEQLLPVVSNDAGDPK---TAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWE-QGGSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCH-------RGGHDGGSEAWHAAQ---CFYIGLSFDKEEMERRKVGKEVFVGEFIRK--WRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRK 538
            VLEQ    +     +PK    +A LQT++  H P ES+    RR   + ELRS+F  W+K  C  K +PEE+ A AGG++ + GSY+L V+EPGADID  CV P H++REDFF+S  +   +HPKV  L +   A VP+++F  + ++ D+  A LP  S+   +++ +D +L GVD  T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL   WKWP  ++LCK  DA LG  VW    G +R ++MPI+TPAYP+ NS++NVS  +L+VMK EF RG  ++   L+      G E         W  L EPS+FF  +  YLAV+++    + E AW    ESR+R LV+ L           P    + ++ + F   +        GG   G      ++   CFY+G   D+ ++  R+V  +  V  F     +R+   TP              DV V+ V W+ LP +VFE +GG  +AR  RR+
Sbjct:   12 VLEQAYKAIRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTP--NRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNN-WKWPLAIQLCKTHDAKLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKG----GSE---------WGPLFEPSEFFAVHQHYLAVEVYTEKQDEEQAWCSFCESRMRKLVESL--------AYNPALCRLRVYTKKFSLSYVTAGEAPVGGQSNGQPPAQPSKFGACFYVGFDIDRRQLRSREVSIDSSVEYFKNNDLYRWNKRTP------------TMDVRVTPVLWKALPESVFEEMGGRTVARAARRE 518          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|698799700|ref|XP_009832879.1| (hypothetical protein H257_08614 [Aphanomyces astaci] >gi|574112276|gb|ETV77769.1| hypothetical protein H257_08614 [Aphanomyces astaci])

HSP 1 Score: 390.193 bits (1001), Expect = 6.170e-122
Identity = 207/531 (38.98%), Postives = 313/531 (58.95%), Query Frame = 0
Query:   26 DPKTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQG-GSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRG--GHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEF----IRKWRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRRKERGKGKEGRKK 549
            D + +A L+ F+++H P E+E+  +RR   + ELR +F  W+K  C  + + EE+   AGG V + GSY+L V+EPGADID  CV P  ++REDFF+S  + L +HPKV +L +   A VPI++F  + ++ D+  A L L+S+   +++ +D ILRGVD+ T  SLNGPR T ++  L P   ++SF+ VLR+VR WAK RGLY+NK+GYLGGVN+ ILV  I Q+YP A P+ +L RFF+VL + WKWP+ ++LCK +DA LG  +W    G +R ++MPI+TPAYP+ NS+YNVS  +LSVMK EFARG  ++   +A             A  A W  L +PS++F+ +  YLAV+M+ + A  + AW G  ESRLR  ++ L           P    + ++P+ F  C     G  G +        +++    DK ++  ++V  +  V +F    + +W       P+       R  G DV ++ + W+ LP  VF  +GG K A+++R+K   + KE + K
Sbjct:   31 DVELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGTVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKEILLKHPKVTNLVAIEGATVPILTFDYEDINIDLQIAILNLSSIPDNINILDDNILRGVDSATEKSLNGPRVTELMINLTP--NRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQ-WKWPSAIQLCKTYDAKLGLEIWNANVGGNRFQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFARGYAMVKTIIA-------------AGGADWAPLFDPSEYFVDHQHYLAVEMYVADAADQGAWCGFAESRLRKFIESLAYH-------NPQLCRLRVYPKKFDLCSEDAQGKFGCT--------YFVAFDVDKTKLRGKEVRLDSAVDDFKLNSLYRW-------PK-------RVDGMDVRITALGWKSLPEAVFHDMGGLKAAKDQRQKYLKRKKEEQAK 516          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|813198470|ref|XP_012208818.1| (hypothetical protein SPRG_14011 [Saprolegnia parasitica CBS 223.65] >gi|641526098|gb|KDO20493.1| hypothetical protein SPRG_14011 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 388.652 bits (997), Expect = 2.532e-121
Identity = 216/535 (40.37%), Postives = 309/535 (57.76%), Query Frame = 0
Query:   12 VLEQLLPVVSN---DAGDPKTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQG-GSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGGHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEFIRKWRFAVETPPRGGQMRSM-----RPRGCDVLVSEVKWRELPANVFESLGGEKLARERRR 537
            VLEQ    +     +A D + +  LQ ++  H PME E+  +RR   + ELRS+F  W+K  C  + LPEE+   AGG + + GSY+L V+EPGADID  CV P  ++R+DFF+S  D L +H KV +L +   A VPI++F  + ++ D+  A L   S+   ++V +D IL GVD  T  SLNGPR T ++ +L P   ++SF+ VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF++L   WKWP  ++LCK  DA LG  VW    G ++ ++MPI+TPAYP+ NS+YNVS  +LSVMK EF RG +V+   +         + G +     W  L EPS +F+ +  YLA++++ S  E +AAW G  ESRLR LVD L           P    + + P+ FP C     D      H    F   L+FD ++++ R   KE+ +   +  ++           M S+     R  G DV ++ V W+ LP  VFE +GG+K+A+E R+
Sbjct:   11 VLEQAYKAIRTTPPEAVDVEMSEKLQAYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTRDDFFSSLKDILLKHAKVTNLVAIEGAIVPILTFDYEEINIDLQIAILERNSIPENLNVLDDNILVGVDTPTEKSLNGPRVTELVIKLTP--NRSSFIAVLRIVRRWAKKRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMILT-NWKWPLAIQLCKTHDAHLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFKRGLEVVKTII--------KDGGRD-----WSALFEPSPYFVDHQHYLAIEIYTSNVEDQAAWCGYAESRLRKLVDSLAY-------YNPQLCRLRVHPKKFPLCFASDPDDEK---HGGAYF---LAFDVDKLKLRN-SKEIHLNGAVDDFK-----------MNSLYRWPKRVDGMDVKITPVVWKNLPEFVFEDIGGKKIAKEMRQ 504          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|1173954247|gb|OQS01727.1| (Poly(A) polymerase [Achlya hypogyna])

HSP 1 Score: 385.956 bits (990), Expect = 3.639e-120
Identity = 213/539 (39.52%), Postives = 308/539 (57.14%), Query Frame = 0
Query:    3 TAGQPLKRAVLEQLLPVVSNDAGDP---KTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQG-GSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFPPCHRGGHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEFIRKWRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRR 537
            T+  P+   VLEQ    +     +P   + +  LQ+++  H PME E+  +RR   + ELRS+F  W+K  C  + LPEE+   AGG + + GSY+L V+EPGADID  CV P  ++REDFFTS  D L +H KV +L +   A VPI++F  + ++ D+  A L   S+   ++V +D I  GVD  T  SLNGPR T ++ +L P   +ASF+ VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P+ +L RFF++L   WKWP  ++LCK  DA LG  VW    G ++ ++MPI+TPAYP+ NS+YNVS  +L+VMK EF RG +V+   +                 + W  L EP+ +F+ +  YLAV+++ S  +  AAW G  ESRLR LVD L           P    + + P+ FP  +   +D   +  H    F   ++FD ++++ R   KE+ +   +  ++               R  G DV ++ V W+ LP  VFE LGG+K+A+E R+
Sbjct:    4 TSAAPM---VLEQAYKAIRTTPPEPVDLELSTKLQSYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLTRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKDILLKHVKVTNLVAIEGAVVPILTFDYEEINIDLQIAILERNSIPDNLNVLDDNIFVGVDTATEKSLNGPRVTELVIKLTP--NRASFIAVLRIVRRWAKKRGLYSNKMGYLGGVNYCILVCFINQLYPTAAPSTLLLRFFMILT-NWKWPLAIQLCKTHDAKLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLNVMKEEFKRGLEVVKTII-------------KDGGSDWSALFEPTPYFVDHQHYLAVEIFTSNPDDSAAWCGYAESRLRKLVDSLAY-------YNPQLCRLRVHPKKFPLTYV--NDDPEDPKHGGTYF---VAFDVDKLKLRN-SKEIHLNGAVDDFKLT------SLYRWPKRVEGMDVKITPVVWKNLPEFVFEDLGGKKVAKEMRQ 504          
BLAST of EWM26533.1 vs. NCBI_GenBank
Match: gi|635369792|emb|CCI42012.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 386.726 bits (992), Expect = 4.319e-120
Identity = 215/559 (38.46%), Postives = 304/559 (54.38%), Query Frame = 0
Query:    1 MSTAGQPLKRAVLEQL---LPVVSNDAGDPKTAASLQTFVSAHIPMESEREQRRRRDKVLELRSLFLDWIKATCHAKNLPEEVVAVAGGEVYIMGSYKLNVHEPGADIDLCCVVPVHISREDFFTSFHDTLRQHPKVKDLASAASAHVPIMSFALDGVDFDVLFAQLPLTSVKAGMSVDEDLILRGVDAKTYLSLNGPRTTNMITRLVPASAQASFLTVLRVVRIWAKNRGLYANKMGYLGGVNFNILVAMICQMYPRANPALMLHRFFLVLGERWKWPTPVRLCKNFDAGLGFPVWEQG-GSSRRELMPIITPAYPAGNSAYNVSAQTLSVMKTEFARGKKVLDKALAMASLTPGDEVGNNAAQAAWRELIEPSDFFIRYNRYLAVDMWASTAEGEAAWFGLVESRLRLLVDILDREPREIYGLGPIFKSVHLFPRAFP--------------PCHRGGHDGGSEAWHAAQCFYIGLSFDKEEMERRKVGKEVFVGEF----IRKWRFAVETPPRGGQMRSMRPRGCDVLVSEVKWRELPANVFESLGGEKLARERRR 537
            M ++  P+  + LEQ    + V   +  D + +  L+ F+S H P E+     RR   + ELR++F +W+K  C  K +PEE+ A AGG + + GSY+L V+EPGADID  CV P  I+REDFFTS      QH KV +L +   A VP+++F  + ++ D+  A LP  ++   +++  D IL GVDA T  SLNGPR T ++ +L P   + SF++VLR+VR WAK RGLY+NKMGYLGGVN+ ILV  I Q+YP A P  +L RFF+VL   WKWP  ++LCK  D  LG  VW    G++R  +MPI+TPAYP+ NS++NVS  +L+VMK EF R  K++ + L             N     W  L E SDFF     YLAVD++ +  E E AW G  ESR+R L++ L           P+   +  FP+ FP              P  R      +  + A  CFY+G   D+ ++  R+V  +  V  F    + +W              + R    DV ++ V W+ LP  VFE +GG  +A+  RR
Sbjct:    1 MQSSPFPVAPSKLEQAYKAIRVTPPELMDLEQSKKLKDFMSKHFPTENGVNITRRSLILAELRTIFRNWVKQVCIKKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITREDFFTSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKLTP--NRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLAN-WKWPLAIQLCKTEDVKLGLEVWNANVGNNRYHIMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEIL-------------NRGAVDWDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWCGFCESRIRKLIESL--------AYIPMLCHLRAFPKRFPLSFADEDHDENIETPTDRKNDVKETSKYGA--CFYVGFDIDRRQLRSREVSIDSSVDYFKHNDLYRW--------------NKRSESMDVRITPVLWKNLPEYVFEEMGGRVVAKSIRR 519          
The following BLAST results are available for this feature:
BLAST of EWM26533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108611|gb|EWM26533.1|0.000e+0100.00poly polymerase gamma [Nannochloropsis gaditana][more]
gi|695377125|ref|XP_009515939.1|6.386e-12841.51hypothetical protein PHYSODRAFT_474162 [Phytophtho... [more]
gi|566020562|gb|ETI43473.1|1.999e-12540.15hypothetical protein F443_11577 [Phytophthora para... [more]
gi|567957962|gb|ETK83556.1|3.295e-12540.15hypothetical protein L915_11262 [Phytophthora para... [more]
gi|675197643|ref|XP_008907706.1|3.824e-12540.15hypothetical protein PPTG_13623 [Phytophthora para... [more]
gi|301118192|ref|XP_002906824.1|1.756e-12339.59Poly(A) polymerase, putative [Phytophthora infesta... [more]
gi|698799700|ref|XP_009832879.1|6.170e-12238.98hypothetical protein H257_08614 [Aphanomyces astac... [more]
gi|813198470|ref|XP_012208818.1|2.532e-12140.37hypothetical protein SPRG_14011 [Saprolegnia paras... [more]
gi|1173954247|gb|OQS01727.1|3.639e-12039.52Poly(A) polymerase [Achlya hypogyna][more]
gi|635369792|emb|CCI42012.1|4.319e-12038.46unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4152rna4152Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications