EWM26530.1, cds4138 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|585108608|gb|EWM26530.1| (thioredoxin family protein [Nannochloropsis gaditana]) HSP 1 Score: 657.907 bits (1696), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0 Query: 1 MRHFLAITAPIVLLVQMTMAFRPTARSRVQMLWGSQTKKPVTIGGPINEPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 MRHFLAITAPIVLLVQMTMAFRPTARSRVQMLWGSQTKKPVTIGGPINEPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV Sbjct: 1 MRHFLAITAPIVLLVQMTMAFRPTARSRVQMLWGSQTKKPVTIGGPINEPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|873238903|emb|CEL95407.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 316.235 bits (809), Expect = 1.515e-103 Identity = 160/287 (55.75%), Postives = 195/287 (67.94%), Query Frame = 0 Query: 49 EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEE--------------VDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 +P+ F++RPDK LD+ATASA + R GSGA V GY+V + +D +YTFV+V G+++ ET RP P+ LYEF+GCPFC KVREAVSILDLDVLFYPCPKDGK +RP VAR GKSQFPY+VDPN K+EMYES DIIQYL D Y G+ P L G + GL LAPR+GKGS+ + S P++PLI WGYE SPF ++V+E L+ ELPH+ K CARGS KR L + G F VP++EDPNTGV MFESAEI+ YL Y V Sbjct: 46 KPRKFAIRPDKALDIATASAGLVFRLGSGALVNGYRVSFEKADTDTPKDAPQTRAPSGLDEDEYTFVTVAGRKTVET-NRLGKRPAVPLELYEFEGCPFCRKVREAVSILDLDVLFYPCPKDGKVYRPRLVARAGKSQFPYLVDPNEKLEMYESDDIIQYLFDTYSDGKVPLFLRLGPFTTITCGLGLAPRLGKGSRYIPSKS--PREPLILWGYEGSPFVKIVREVLSSRELPHLMKFCARGSPKRSALLKKTGTFQVPYLEDPNTGVKMFESAEIVNYLNDEYGV 329
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|527199203|gb|EPS67072.1| (hypothetical protein M569_07704, partial [Genlisea aurea]) HSP 1 Score: 310.071 bits (793), Expect = 1.009e-101 Identity = 153/273 (56.04%), Postives = 189/273 (69.23%), Query Frame = 0 Query: 49 EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 +PKPFSVRPDK LD AS + R +G FV GY + +V E+ + Y + + G + KET G P++PI +YEF+GCPFC KVRE V+ILDLDVL+YPCP++G+ FRP + GGK QFPYMVDPNT V MYES DII+YLV YG G P L G + GLA+ R GKGS + S +P +PL W YEASPFC+LV+E LNELELPH+ SCARGS KR+ L+ R G F VP++EDPNTG+ MFESAEI+EYL TYA+ Sbjct: 45 KPKPFSVRPDKILDTVGASLALIFRLATGVFVSGYSLRIVPANEIPSNQYA-LELAGFKIKETSNLRPG-PEKPIEIYEFEGCPFCRKVREIVAILDLDVLYYPCPRNGRHFRPKVLQIGGKQQFPYMVDPNTGVSMYESDDIIKYLVGKYGDGNIPWTLSLGPLTTLTEGLAMIGRAGKGSSYIP--SKLPPQPLEIWAYEASPFCKLVREVLNELELPHLLHSCARGSPKRQALRDRVGHFQVPYLEDPNTGIQMFESAEIIEYLKATYAL 313
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|1137196356|gb|OMO68358.1| (Thioredoxin-like protein [Corchorus olitorius]) HSP 1 Score: 307.375 bits (786), Expect = 3.377e-100 Identity = 160/290 (55.17%), Postives = 191/290 (65.86%), Query Frame = 0 Query: 35 SQTKKPVTIGGPIN----EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYA 320 S + T P N EPK FSVRPD+ LD+ AS R G+G FV GY +V E+ G Y + VGG + KET A RP++PI +YEF+ CPFC KVRE V+ LD+DVLFYPCP++G FRP A GGK QFPYMVDPNT V MYES +II+YLVD YG G TP L G + G AL R+G+GS S +P KPL W YE SPFC++V+E L ELELPH+Q+SCARGS KR+ L R G F VP++EDPNTGV MFESAEI+EYL TYA Sbjct: 58 SSSSTATTFAAPPNFKAPEPKAFSVRPDQTLDILGASLALFFRVGTGVFVNGYSSSVVSENEIPPGQYC-LQVGGNKVKET-AKIGPRPEKPIEIYEFESCPFCRKVREIVAYLDIDVLFYPCPRNGPNFRPKAAQLGGKQQFPYMVDPNTGVAMYESDEIIKYLVDKYGDGSTPLMLKLGLLTTLTAGFALIGRMGRGSSYTP--SKMPPKPLEIWAYEGSPFCKIVREVLVELELPHIQRSCARGSPKRQILYERVGHFQVPYLEDPNTGVQMFESAEIVEYLKATYA 343
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|1150699040|ref|XP_020260361.1| (uncharacterized protein LOC109836771 [Asparagus officinalis]) HSP 1 Score: 306.22 bits (783), Expect = 6.939e-100 Identity = 153/273 (56.04%), Postives = 187/273 (68.50%), Query Frame = 0 Query: 49 EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 +PKPFSVRPDK DV AS R GSG F QGY V V ++ AG Y +S+ G + KET A RP++PI +YE++GCPFC KVRE V++LDLDVLFYPCP++G FRP + GGK QFPYMVDPNT V MYES DII+YLV+ YG G P L G + GLA+ R+GKGS S +P +P+ W YE SPFC+LV+E + ELELPH+ SCARGS KR+ L R G F P++EDPNTGV MFESA+I+EYL TYA+ Sbjct: 56 DPKPFSVRPDKRGDVFGASLPLFFRFGSGVFAQGYSVSFVPEDQFPAGQYA-MSMSGNKLKET-AKLGPRPEKPIEIYEYEGCPFCRKVREIVAVLDLDVLFYPCPRNGPNFRPKVLQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVNKYGDGSVPILLSLGLFTTITAGLAMTGRLGKGSSYTP--SKLPPEPIELWAYEGSPFCKLVREVIVELELPHILHSCARGSPKRQILFERVGHFQAPYLEDPNTGVKMFESADIIEYLKATYAL 324
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|302803969|ref|XP_002983737.1| (hypothetical protein SELMODRAFT_118724 [Selaginella moellendorffii] >gi|300148574|gb|EFJ15233.1| hypothetical protein SELMODRAFT_118724 [Selaginella moellendorffii]) HSP 1 Score: 303.908 bits (777), Expect = 4.004e-99 Identity = 150/269 (55.76%), Postives = 183/269 (68.03%), Query Frame = 0 Query: 53 FSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 + V DK D+ AS LR G+GA VQGYK V E+V Y+ GG++ ET A RP+QPI +YEF+GCPFC KVREA +ILDLD+LFYPCPKDG +RP A+ GGK QFPYMVDPNT V MYES +II+YLVD YG G+ P L G+ + GLA+ R GKGS+ V + P KPL W YE SPFC++V+E+L ELELPHV + ARGS KR L R G + VPF+EDPNTGV MFES+EI++YL TYA+ Sbjct: 55 YHVENDKMFDILGASLAVPLRLGTGALVQGYKASFVPKEQVPPSQYSLFDFGGQKLVET-AVLGARPQQPIQIYEFEGCPFCRKVREAATILDLDILFYPCPKDGPTYRPKAIELGGKKQFPYMVDPNTDVAMYESDEIIKYLVDKYGNGKVPFMLSLGFFTTLTAGLAMLGRAGKGSQYVP--ARKPDKPLKIWAYELSPFCKIVRERLVELELPHVYYNAARGSPKRNYLLERTGIYQVPFLEDPNTGVEMFESSEIIKYLNTTYAL 320
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|302817692|ref|XP_002990521.1| (hypothetical protein SELMODRAFT_131933 [Selaginella moellendorffii] >gi|300141689|gb|EFJ08398.1| hypothetical protein SELMODRAFT_131933 [Selaginella moellendorffii]) HSP 1 Score: 303.523 bits (776), Expect = 5.991e-99 Identity = 150/269 (55.76%), Postives = 182/269 (67.66%), Query Frame = 0 Query: 53 FSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 + V DK D+ AS LR G+GA VQGYK V E+V Y+ GG++ ET A RP+QPI +YEF+GCPFC KVREA +ILDLD+LFYPCPKDG +RP A+ GGK QFPYMVDPNT V MYES +II+YLVD YG G+ P L G+ + GLA+ R GKGS+ V + P KPL W YE SPFC++ +E+L ELELPHV + ARGS KR L R G F VPF+EDPNTGV MFES+EI++YL TYA+ Sbjct: 55 YHVENDKMFDILGASLAVPLRLGTGALVQGYKASFVPKEQVPPSQYSLFDFGGQKLVET-AELGARPQQPIQIYEFEGCPFCRKVREAATILDLDILFYPCPKDGPTYRPKAIELGGKKQFPYMVDPNTDVAMYESDEIIKYLVDKYGNGKVPFMLSLGFFTTLTAGLAMLGRAGKGSQYVP--ARKPDKPLKIWAYELSPFCKIARERLVELELPHVYYNAARGSPKRNYLLERTGIFQVPFLEDPNTGVEMFESSEIIKYLNTTYAL 320
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|1117483721|ref|XP_019428849.1| (PREDICTED: uncharacterized protein LOC109336602 [Lupinus angustifolius] >gi|1102690770|gb|OIV90396.1| hypothetical protein TanjilG_10696 [Lupinus angustifolius]) HSP 1 Score: 302.368 bits (773), Expect = 2.028e-98 Identity = 152/292 (52.05%), Postives = 188/292 (64.38%), Query Frame = 0 Query: 35 SQTKKPVTIGGPIN----EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVG-RPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 S ++P + P++ EPK F VRPD +V A+ + R +G FV GY V +E+ G Y + G + KET A + RP++PI +YEF+ CPFC KVRE V+ILDLDVLFYPCP++G FRP AV GGK QFPYMVDPNT MYES DII+YLV YG G P L G+ + GL + R GKGSK + +P KPL W YE SPFC+LV+E L ELELPHVQ SCARGS KR+ L + G F P++EDPNTG+ MFES EI+EYL TYA+ Sbjct: 43 STQQEPTPLSAPLDFKAPEPKRFEVRPDMRGEVLGAALPLIFRFATGVFVSGYSFSFVPKDEIPPGQYAMLEFNGYKLKETSKANLSPRPEKPIEIYEFESCPFCRKVREIVAILDLDVLFYPCPRNGPNFRPKAVEIGGKKQFPYMVDPNTGTSMYESDDIIRYLVGQYGDGNVPFTLSLGFLTTLTAGLGMIARSGKGSKYTP--AKLPPKPLKLWAYEGSPFCKLVREVLVELELPHVQISCARGSPKRQILYDKTGHFQAPYLEDPNTGIGMFESGEIIEYLKTTYAL 332
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|1023997953|gb|KZV28431.1| (hypothetical protein F511_03234 [Dorcoceras hygrometricum]) HSP 1 Score: 301.982 bits (772), Expect = 3.496e-98 Identity = 154/286 (53.85%), Postives = 190/286 (66.43%), Query Frame = 0 Query: 41 VTIGGPIN----EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVG-RPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYAV 321 +++ P N PKPFSVRPDK LD+ AS L R + V GY V LV +E+ + +Y + + G + KE+ VG RP+ PI +YEF+ CPFC KVRE VS+LDLDVL+YPCP++G FRP GGK QFPYMVDPNT V MYES DII+YLV YG G+ P L G + G A+ R+GKGS S +P KPL W YEASPFC++V+E L ELELPH+ SCARGS KR+ L R G F VP++EDPNTG+ MFESA+I+EYL TYAV Sbjct: 52 ISVSAPPNFRAPNPKPFSVRPDKVLDILGASLAFLFRLTTSVLVSGYSVTLVPNKEIPSDEYA-LGIAGFKLKESSK--VGPRPEMPIEIYEFESCPFCRKVREIVSVLDLDVLYYPCPRNGPNFRPKVAEMGGKKQFPYMVDPNTGVSMYESDDIIKYLVGKYGDGKVPFLLSLGLFTTLTEGFAMIGRMGKGSSYTP--SKLPPKPLEIWAYEASPFCKVVREVLVELELPHILHSCARGSPKRQILYQRVGHFQVPYLEDPNTGIQMFESADIIEYLRATYAV 332
BLAST of EWM26530.1 vs. NCBI_GenBank
Match: gi|923731991|ref|XP_013668373.1| (PREDICTED: uncharacterized protein LOC106372656 [Brassica napus] >gi|674964046|emb|CDX70278.1| BnaA10g26270D [Brassica napus]) HSP 1 Score: 301.212 bits (770), Expect = 6.498e-98 Identity = 150/290 (51.72%), Postives = 191/290 (65.86%), Query Frame = 0 Query: 35 SQTKKPVTIGGPIN----EPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYA 320 +++ +PV P N EP+ F+V+P K DV AS L R G+G FV GY V +EV Y F +GG KE+ + RP++PI +YEF+GCPFC KVRE V +LDLD+L+YPCP+ FRP GGK QFPYMVDPNT V MYES II+YL + YG G P L G + G A+ R+GKG+ + +P KPL++W YE SPFC++V+E L ELELPH+Q+SCARGS KR EL +AG F VP++EDPNTGV+MFESAEI+EYL +TYA Sbjct: 49 TKSSEPVVFTAPPNFKPPEPQRFAVKPGKLFDVLGASIGLLFRFGTGVFVSGYSASFVSEDEVPPDQYAF-RLGGITVKES-SKLGPRPEKPIEIYEFEGCPFCRKVREMVGVLDLDILYYPCPRGSPNFRPTVNQMGGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLTLGPLTAITAGFAMIGRMGKGNMYTP--AKLPPKPLVFWAYEGSPFCKIVREVLVELELPHIQRSCARGSPKRHELLQKAGHFQVPYLEDPNTGVNMFESAEIIEYLKQTYA 334 The following BLAST results are available for this feature:
BLAST of EWM26530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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