EWM26531.1, cds4137 (CDS) Nannochloropsis gaditana

Overview
NameEWM26531.1
Unique Namecds4137
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:980450..980917 -
Alignment locationCM002462.1:979791..980312 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26531.1
Productglutathione s-transferase
Orig transcript idgnl|cribi|Naga_100141g16.8378.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:980450..980917 -
CM002462.1supercontigCM002462.1:979791..980312 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR012336Thioredoxin-like_fold
IPR010987Glutathione-S-Trfase_C-like
Homology
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|585108609|gb|EWM26531.1| (glutathione s-transferase [Nannochloropsis gaditana])

HSP 1 Score: 666.766 bits (1719), Expect = 0.000e+0
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query:    1 MPGLDVLDQMGKEGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASPPSPAAVREEEKRRGGWLWRAASLVGAVNAAVPLLGLVSFASLLVGVGVGRYQGWGPHSARTGGR 329
            MPGLDVLDQMGKEGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASPPSPAAVREEEKRRGGWLWRAASLVGAVNAAVPLLGLVSFASLLVGVGVGRYQGWGPHSARTGGR
Sbjct:    1 MPGLDVLDQMGKEGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASPPSPAAVREEEKRRGGWLWRAASLVGAVNAAVPLLGLVSFASLLVGVGVGRYQGWGPHSARTGGR 329          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|514691257|ref|XP_004993202.1| (hypothetical protein PTSG_06311 [Salpingoeca rosetta] >gi|326428732|gb|EGD74302.1| hypothetical protein PTSG_06311 [Salpingoeca rosetta])

HSP 1 Score: 167.162 bits (422), Expect = 4.442e-46
Identity = 107/293 (36.52%), Postives = 149/293 (50.85%), Query Frame = 0
Query:    7 LDQMGKEGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAF----DYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASPPSPAAVREEEKRRGGWLWRAASLVGAVNAA 295
              Q G+EG+ +  ++++A         +FGNR+CP+AH+AWW+   K V F    DY+HV+LG  KP WY   +NP GTVP LY     + ES II EY+ EK    KGT L+P DP+ RA  R +IA + ++    LY +L+   P +   A E +L      EVL    H     A   S    GP+ +G   S+ E+VI PF+ R +  L HY G +  +  H+P L+ AY  V +R A+ A+       I  Y AY    S A V+   K+     WR    V A  AA
Sbjct:    3 FSQKGEEGRYV--TELEAAKAVRSGNVYFGNRICPFAHMAWWT--SKEVGFESMMDYIHVELGDNKPAWYA-GINPLGTVPCLYVDGHRICESKIIVEYMNEKM---KGT-LLPEDPIKRADARFLIAMWGDKVFAKLYTVLRTTDPCDRQCAWEQLL------EVLSFFDH-----AYEESKSKDGPYFMGNDLSMVEIVIMPFIARFATLLPHYHGLNFFKDRHIPTLERAYREVLKRPAFAATKLDAELCIQFYNAYVH-GSKAIVK---KKDCTCKWRTPGYVLAGAAA 271          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|167515874|ref|XP_001742278.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163778902|gb|EDQ92516.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 159.073 bits (401), Expect = 4.609e-43
Identity = 92/263 (34.98%), Postives = 138/263 (52.47%), Query Frame = 0
Query:    4 LDVLDQMGKEGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVA--FDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYAS 264
            +  + Q   EG  +   +V+  LH+   +T+FGNR+CP+AH AWW+  E   A    YVH++L   KP WY+ KVNP GTVP L      +FES+I+A Y+    G      L P DP+ ++ V  +IA F  +    LY++++ + P++    K  +      LE LY +     PA          P+L+G   S+AE+ + PFLDR+   L+HYR F+  R   +P LQ AYEV   R A+  +  P A  + +   YA+
Sbjct:    1 MTSIKQNHGEGLVLSEQEVEQYLHK--GITYFGNRVCPFAHRAWWTANETGFADRMTYVHIELMDNKPAWYQAKVNPSGTVPMLVVDGVPIFESLIVANYMNNAAGGS----LWPTDPLKKSHVEAIIAKFDSKCTGALYQVVRNRDPSKDAELKASLKSAYEDLEALYTQFKA-DPAK---------PYLMGDDLSMAEIAMMPFLDRMVPTLEHYRSFNLFREAQIPNLQRAYEVASARPAFVKTRFPDA--VKLMNVYAN 245          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|470482895|ref|XP_004343655.1| (glutathione transferase family protein [Acanthamoeba castellanii str. Neff] >gi|440799479|gb|ELR20524.1| glutathione transferase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 154.451 bits (389), Expect = 1.312e-41
Identity = 86/234 (36.75%), Postives = 133/234 (56.84%), Query Frame = 0
Query:   31 QVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYAS 264
            ++T + N +CPYA  AW + +EK + F+ + V L   KP+WY  KVNP GTVP+L  G++ + ES++I+EY+++ F  E G RL+P+DP  R A R VI  F  +  P +++L+K Q  A+ +  KE +  ++ A   LY           A S+   GP+ LG  FSL ++ I PF+ R ++ L HYRGF  L      +L+  ++ V +R +WK +T  P   I     YA+
Sbjct:    9 KITLYLNVVCPYAQRAWQTAVEKGLEFEAISVPLRGDKPDWYW-KVNPRGTVPTLVHGERTIHESLLISEYLDDAF-PEAGPRLLPSDPYQRYASRFVIDQFGSQVTPAVFQLIKNQDRAQDDKLKEELTKKVEAFAELY----------AAESSSKDGPYFLGESFSLVDLAIVPFIYRFAIGLSHYRGFDLLAVDE--KLKRWHDAVTQRPSWKTTTVTPEALIESMAFYAN 228          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|698776682|ref|XP_009821385.1| (hypothetical protein H257_00403 [Aphanomyces astaci] >gi|574123510|gb|ETV88985.1| hypothetical protein H257_00403 [Aphanomyces astaci])

HSP 1 Score: 135.961 bits (341), Expect = 1.161e-34
Identity = 92/251 (36.65%), Postives = 127/251 (50.60%), Query Frame = 0
Query:   15 QRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLA-LEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYAS 264
            + +  SQ+DA   +  ++  F N +CP+ H A W+ +E +  F  V V L    P  Y EK N +GTVP L      V+ES IIA+YV+ KFG   G      DP + A  +L  A F    + PLY+ L   +  E NVA    L E L  +E +Y  H        A    S GP+LLG + S AE++I PFL R  + LQHYRG+  L     P LQ      + R A++ + + P F+I  Y AYA+
Sbjct:    9 ESLSESQLDAFKQKDGKLHLFNNIICPFGHRALWTAVEAHAPFHVVEVSLADM-PAAYIEKFNRFGTVPYLLSNGSPVYESAIIAQYVDTKFG--NGELFRHHDPEEAALSQLAAAKFE---VGPLYRALGGTS--EDNVAA---LKETLGDVETIYRVH--------AKEFRSSGPYLLGSKLSGAEILIVPFLFRFDILLQHYRGYTLLDG--FPLLQGVLAAAKARPAFQDTVREPQFFIDAYAAYAN 238          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|1173952298|gb|OQS00022.1| (hypothetical protein THRCLA_06296 [Thraustotheca clavata])

HSP 1 Score: 134.035 bits (336), Expect = 6.333e-34
Identity = 82/253 (32.41%), Postives = 130/253 (51.38%), Query Frame = 0
Query:   13 EGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASP 265
            E   +  S++ +   +  +V  F N +CP+ H A W+  E  + FD ++++LG   P+ Y E  N Y TVP L D    VFES I+A++++ K+    G      DP   A  +L +A F+     P+Y LL+ Q  ++    K+ +   M  +E +Y  +        AS   S GP+LLG + S AE+ I  FL R    LQHYR F  ++   +P LQ A +   +R A++ +++ P FYI  +  YA+P
Sbjct:    7 EYTDLTESELTSFKTQDGKVHLFNNLVCPFGHRALWTAAEAGIPFDMINIELGNM-PDSYVENFNRYHTVPFLLDNGYPVFESAIVAQFLDAKYN--NGEFQCRDDPEHAALAQLAMAKFQPS---PIYALLRNQDASKMQQLKDNLSETMQDVETIYRDN--------ASEYRSKGPYLLGDKISSAEINIMTFLFRFQYVLQHYRDFELMKD--VPLLQVALDASVQRPAFQLTSREPEFYINYFGKYANP 243          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|813186900|ref|XP_012207419.1| (hypothetical protein SPRG_12363 [Saprolegnia parasitica CBS 223.65] >gi|641527584|gb|KDO21863.1| hypothetical protein SPRG_12363 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 131.724 bits (330), Expect = 4.663e-33
Identity = 85/235 (36.17%), Postives = 122/235 (51.91%), Query Frame = 0
Query:   31 QVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASP 265
            +V  F N +CP+ H A WS +E N  F  + V L    PE Y  + N Y TVP L D   ++FES IIA++++ K+    G +L   D  +RAA+  +     E  + P Y LL+ Q PA+    +  I   +  LE +Y +H        A+   + GP+L G + S AE+ I PF  R  + L+HYR F  L+    P L AAYE   ER A+K + + P F+I  Y  YA+P
Sbjct:   25 KVHLFNNLICPFGHRALWSAVESNAPFHMIDVSLASM-PEAYITEFNRYHTVPFLLDNGTSIFESAIIAQFLDVKYN---GGKLHQRDSPERAALAQLAQAKFE--IGPFYGLLRNQDPAKKEGFEADIRETLDELEKIYREH--------AAEFRAKGPYLFGDQLSSAEINIIPFFFRFQIILKHYRDFELLKG--YPLLTAAYEAAVERPAFKQTIKEPEFFINAYAKYANP 243          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|1173955782|gb|OQS02700.1| (glutathione transferase family protein [Thraustotheca clavata])

HSP 1 Score: 129.798 bits (325), Expect = 5.824e-32
Identity = 87/244 (35.66%), Postives = 125/244 (51.23%), Query Frame = 0
Query:   13 EGQRIEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYI 256
            E   +  +++DA L    + T F N  CP+ H A W+  E +     V V L    P+ Y E  N Y TVP L D   AV+ES IIA+Y++ K+   K   L   +P D A  +L+ A F    L P++ LL+   PA+    +  +       E +Y ++        A++  S GP+LLG +FS AE+ I PFL R S+ L+H+R F  L     P L AA+E   ER A+K +T+ P FYI
Sbjct:   44 EYTSLSDAELDA-LKNTDRKTLFNNISCPFGHRALWTAAEVDAPVQIVEVGLYNDMPQSYIETFNRYHTVPFLLDNGNAVYESAIIAQYLDVKYNNGKFHSL--DNPEDAALSQLLAAKFE---LGPIFALLRNNDPAKKEQLENNLKEAFGEAERIYREN--------AAAYRSKGPYLLGDKFSQAEIHIVPFLFRFSLGLKHFRDFDIL--ADFPLLSAAFEAAIERPAFKLTTREPEFYI 271          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|813219072|ref|XP_012210913.1| (hypothetical protein SPRG_16151 [Saprolegnia parasitica CBS 223.65] >gi|641523566|gb|KDO18371.1| hypothetical protein SPRG_16151 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 128.642 bits (322), Expect = 6.649e-32
Identity = 84/235 (35.74%), Postives = 121/235 (51.49%), Query Frame = 0
Query:   31 QVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASP 265
            +V  F N +CP+ H A WS +E N  F  + V L    PE Y  + N Y TVP L D   ++FES IIA++++ K+    G +L   D  + AA+  +     E  + P Y LL+ Q PA+    +  I   +  LE +Y +H        A+   + GP+L G + S AE+ I PF  R  + L+HYR F  L+    P L AAYE   ER A+K + + P F+I  Y  YA+P
Sbjct:   25 KVHLFNNLICPFGHRALWSAVESNAPFHMIDVSLASM-PEAYITEFNRYHTVPFLLDDGTSIFESAIIAQFLDVKYN---GGKLHQRDHPEHAALAQLAQAKLE--IGPFYGLLRNQDPAKKEGFEADIRETLDELEKIYREH--------AAEFRAKGPYLFGDQLSSAEINIIPFFFRFQIILKHYRDFELLKG--YPLLTAAYEAAVERPAFKQTIKEPEFFINAYAKYANP 243          
BLAST of EWM26531.1 vs. NCBI_GenBank
Match: gi|1173948238|gb|OQR96383.1| (hypothetical protein THRCLA_07306 [Thraustotheca clavata])

HSP 1 Score: 128.642 bits (322), Expect = 8.688e-32
Identity = 79/249 (31.73%), Postives = 127/249 (51.00%), Query Frame = 0
Query:   17 IEPSQVDAVLHRPHQVTFFGNRLCPYAHIAWWSLLEKNVAFDYVHVDLGQQKPEWYKEKVNPYGTVPSLYDGDKAVFESVIIAEYVEEKFGAEKGTRLMPADPVDRAAVRLVIAHFRERTLPPLYKLLKAQTPAEANVAKELILVEMLALEVLYNKHHPLHPAAVASSTPSPGPFLLGGRFSLAEVVIFPFLDRLSVALQHYRGFHPLRSTHLPRLQAAYEVVQERAAWKASTQPPAFYIAVYEAYASP 265
            +  S++ +   R  +V  F N +CP+ H A W+ +E  V FD +++DL    P+ Y E  N Y TVP L D    VFES I+A++V+ K+    G      +P   A  +L +A F+  +    Y LL+ Q   +    +  I   +  +E +Y  +        A+   S GP+LLG + S AE+ I  FL R    L+H+R F  L+   +P L+AA +   +R A++ + + P FYI  ++ YA+P
Sbjct:   11 LTESELASFKTRDGKVHLFNNLVCPFGHRALWTAVEAGVPFDMINIDLNNM-PDSYVENFNRYHTVPFLLDNGYPVFESAIVAQFVDAKYN--NGDLHCRDNPEQSALAQLAMAKFQAGS---FYGLLRNQDMTKTQQFQNDINEALQDVETIYRDN--------AAEFRSKGPYLLGDKISSAEINIMTFLFRFDFLLKHFRNFDILKD--VPLLKAALDASVQRRAFQLTAREPEFYIKYFDKYANP 243          
The following BLAST results are available for this feature:
BLAST of EWM26531.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108609|gb|EWM26531.1|0.000e+0100.00glutathione s-transferase [Nannochloropsis gaditan... [more]
gi|514691257|ref|XP_004993202.1|4.442e-4636.52hypothetical protein PTSG_06311 [Salpingoeca roset... [more]
gi|167515874|ref|XP_001742278.1|4.609e-4334.98hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|470482895|ref|XP_004343655.1|1.312e-4136.75glutathione transferase family protein [Acanthamoe... [more]
gi|698776682|ref|XP_009821385.1|1.161e-3436.65hypothetical protein H257_00403 [Aphanomyces astac... [more]
gi|1173952298|gb|OQS00022.1|6.333e-3432.41hypothetical protein THRCLA_06296 [Thraustotheca c... [more]
gi|813186900|ref|XP_012207419.1|4.663e-3336.17hypothetical protein SPRG_12363 [Saprolegnia paras... [more]
gi|1173955782|gb|OQS02700.1|5.824e-3235.66glutathione transferase family protein [Thraustoth... [more]
gi|813219072|ref|XP_012210913.1|6.649e-3235.74hypothetical protein SPRG_16151 [Saprolegnia paras... [more]
gi|1173948238|gb|OQR96383.1|8.688e-3231.73hypothetical protein THRCLA_07306 [Thraustotheca c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4147rna4147Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications