EWM26526.1, cds4136 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|585108604|gb|EWM26526.1| (endonuclease v [Nannochloropsis gaditana]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0 Query: 1 MDRSQYEDEGEDQQFKLPSSAHFGSEHGNMKTRPNLHAIETEWRADQERRRIAILEVDTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPGRRVEKREAGGGHRLEELETKGSRTPEADVDNGEAGVRQEEVCPVNASTTHFHRAQSPGRVFHLVGRAGRVWGAAFCPSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWEGGRGKVEAKGGGDPRGSSM 374 MDRSQYEDEGEDQQFKLPSSAHFGSEHGNMKTRPNLHAIETEWRADQERRRIAILEVDTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPGRRVEKREAGGGHRLEELETKGSRTPEADVDNGEAGVRQEEVCPVNASTTHFHRAQSPGRVFHLVGRAGRVWGAAFCPSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWEGGRGKVEAKGGGDPRGSSM Sbjct: 1 MDRSQYEDEGEDQQFKLPSSAHFGSEHGNMKTRPNLHAIETEWRADQERRRIAILEVDTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPGRRVEKREAGGGHRLEELETKGSRTPEADVDNGEAGVRQEEVCPVNASTTHFHRAQSPGRVFHLVGRAGRVWGAAFCPSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWEGGRGKVEAKGGGDPRGSSM 374
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|553194265|ref|XP_005855917.1| (endonuclease-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293144|gb|EKU20444.1| endonuclease-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 188.348 bits (477), Expect = 2.268e-56 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 Query: 51 RIAILEVDTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTL 142 RIAILEVDTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTL Sbjct: 1 RIAILEVDTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTL 92
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|695380472|ref|XP_009516819.1| (hypothetical protein PHYSODRAFT_294653 [Phytophthora sojae] >gi|348689730|gb|EGZ29544.1| hypothetical protein PHYSODRAFT_294653 [Phytophthora sojae]) HSP 1 Score: 157.918 bits (398), Expect = 2.464e-39 Identity = 83/170 (48.82%), Postives = 109/170 (64.12%), Query Frame = 0 Query: 58 DTFDRASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPG 227 DT DR +L RV G+D+SF S+ H A A VVL YPSL VL+E++ +L PY+AGFLA+RE P + +L ++LRR +P L+P V +VDGNG+LHP+G GLASH G+L GIP+IG KTFLHV+GL L V K L + + + G+ G G L G G Sbjct: 419 DTKDRKALKRVAGVDISFLKGSNEH----ACASIVVLEYPSLSVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGVLHPQGFGLASHFGVLAGIPTIGVGKTFLHVDGLTKLDV-KGLMARAREEHHDLVKLAGKSGKVWGAALCGTAG 583 HSP 2 Score: 92.0485 bits (227), Expect = 1.474e-16 Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = 0 Query: 290 LVGRAGRVWGAAFC-PSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWE 355 L G++G+VWGAA C +GV NP+YVSVG +SL S+++ +AC +YRVPEP+RQAD+RSR +R WE Sbjct: 566 LAGKSGKVWGAALCGTAGVKNPVYVSVGHMLSLDSSVAIAQACSQYRVPEPIRQADLRSREVIRQWE 632
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|570974820|gb|ETP37082.1| (hypothetical protein F442_15079 [Phytophthora parasitica P10297]) HSP 1 Score: 147.132 bits (370), Expect = 5.272e-38 Identity = 92/227 (40.53%), Postives = 125/227 (55.07%), Query Frame = 0 Query: 65 LTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPGRRVEKREAGGGHRLEELETKGS--------RTPE----ADVDNGEAGVRQEEVCPVNASTTHFH 279 L RV G+D+SF S H A A VVL +PSL VL+E++ +L PY+AGFLA+RE P + +L ++LRR +P L+P V +VDGNGILHP+G GLASH G+L IP+IG KTFLHV+GL V K L + R+ + G+ G G L G G + GH L L+T + R PE AD+ + E + E V+ + +H Sbjct: 55 LRRVAGVDISFLKGSDEH----ACASIVVLDFPSLTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGILHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDV-KGLMAKAREEDRDLVKLTGKSGKIWGAALCGTAGVK-NPVYVSVGHML-SLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKWENAGTVDITLDMYH 274 HSP 2 Score: 89.3521 bits (220), Expect = 1.104e-16 Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 287 VFHLVGRAGRVWGAAFC-PSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWEGG 357 + L G++G++WGAA C +GV NP+YVSVG +SL ++++ +AC +YRVPEP+RQAD+RSR +R WE Sbjct: 192 LVKLTGKSGKIWGAALCGTAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKWENA 263
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|675204209|ref|XP_008910989.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|566016234|gb|ETI39145.1| hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567953719|gb|ETK79365.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567982356|gb|ETL32777.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568011864|gb|ETL86042.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568041825|gb|ETM39197.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568088908|gb|ETN03762.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570319950|gb|ETO67898.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570943795|gb|ETP09052.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570974821|gb|ETP37083.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970652159|gb|KUF90871.1| E3 ubiquitin-protein ligase [Phytophthora nicotianae]) HSP 1 Score: 146.362 bits (368), Expect = 5.377e-38 Identity = 92/227 (40.53%), Postives = 125/227 (55.07%), Query Frame = 0 Query: 65 LTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPGRRVEKREAGGGHRLEELETKGS--------RTPE----ADVDNGEAGVRQEEVCPVNASTTHFH 279 L RV G+D+SF S H A A VVL +PSL VL+E++ +L PY+AGFLA+RE P + +L ++LRR +P L+P V +VDGNGILHP+G GLASH G+L IP+IG KTFLHV+GL V K L + R+ + G+ G G L G G + GH L L+T + R PE AD+ + E + E V+ + +H Sbjct: 29 LRRVAGVDISFLKGSDEH----ACASIVVLDFPSLTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGILHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDV-KGLMAKAREEDRDLVKLTGKSGKIWGAALCGTAGVK-NPVYVSVGHML-SLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKWENAGTVDITLDMYH 248 HSP 2 Score: 88.9669 bits (219), Expect = 1.168e-16 Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 287 VFHLVGRAGRVWGAAFC-PSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWEGG 357 + L G++G++WGAA C +GV NP+YVSVG +SL ++++ +AC +YRVPEP+RQAD+RSR +R WE Sbjct: 166 LVKLTGKSGKIWGAALCGTAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKWENA 237
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|675204207|ref|XP_008910988.1| (hypothetical protein PPTG_15958 [Phytophthora parasitica INRA-310] >gi|566016233|gb|ETI39144.1| hypothetical protein F443_15241 [Phytophthora parasitica P1569] >gi|567953718|gb|ETK79364.1| hypothetical protein L915_14780 [Phytophthora parasitica] >gi|567982355|gb|ETL32776.1| hypothetical protein L916_14694 [Phytophthora parasitica] >gi|568011863|gb|ETL86041.1| hypothetical protein L917_14501 [Phytophthora parasitica] >gi|568041824|gb|ETM39196.1| hypothetical protein L914_14638 [Phytophthora parasitica] >gi|568088907|gb|ETN03761.1| hypothetical protein PPTG_15958 [Phytophthora parasitica INRA-310] >gi|570319949|gb|ETO67897.1| hypothetical protein F444_15226 [Phytophthora parasitica P1976] >gi|570943794|gb|ETP09051.1| hypothetical protein F441_15052 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 146.747 bits (369), Expect = 6.507e-38 Identity = 92/227 (40.53%), Postives = 125/227 (55.07%), Query Frame = 0 Query: 65 LTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGGREGGREGGREGLTKGQDLVGGPGRRVEKREAGGGHRLEELETKGS--------RTPE----ADVDNGEAGVRQEEVCPVNASTTHFH 279 L RV G+D+SF S H A A VVL +PSL VL+E++ +L PY+AGFLA+RE P + +L ++LRR +P L+P V +VDGNGILHP+G GLASH G+L IP+IG KTFLHV+GL V K L + R+ + G+ G G L G G + GH L L+T + R PE AD+ + E + E V+ + +H Sbjct: 55 LRRVAGVDISFLKGSDEH----ACASIVVLDFPSLTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGILHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDV-KGLMAKAREEDRDLVKLTGKSGKIWGAALCGTAGVK-NPVYVSVGHML-SLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKWENAGTVDITLDMYH 274 HSP 2 Score: 89.3521 bits (220), Expect = 1.094e-16 Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 287 VFHLVGRAGRVWGAAFC-PSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVRTWEGG 357 + L G++G++WGAA C +GV NP+YVSVG +SL ++++ +AC +YRVPEP+RQAD+RSR +R WE Sbjct: 192 LVKLTGKSGKIWGAALCGTAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKWENA 263
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|1072279607|ref|XP_018425903.1| (PREDICTED: endonuclease V [Nanorana parkeri]) HSP 1 Score: 146.747 bits (369), Expect = 7.507e-38 Identity = 81/173 (46.82%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 42 EWRADQERRRIAILEVDT--------FDRASLTRVGGLDLSFFPSSHGHEREEAVAC--FVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGHRGG 204 EW Q + + ++ DT FD L RVGG+DLS+ + + VAC VVLSYP +EV++E TL PYVAGFLA+RE P + + VE LR +P LMPQVL+VDGNGILH RG G+A H+G+LT +P+IG AK L V+GLE K +Q GG Sbjct: 14 EWERQQTKLKDQLITSDTESWQREAEFD--GLERVGGVDLSYIKGN------DTVACAMLVVLSYPKMEVIYEDCHMVTLDAPYVAGFLAFREAPSLVKAVETLREKRPDLMPQVLLVDGNGILHHRGFGVACHLGVLTNLPTIGVAKNLLQVDGLENSEAHKKQAKQLENGG 178 HSP 2 Score: 78.9518 bits (193), Expect = 4.675e-13 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 285 GRVFHLVGRAGRVWGAAF--CPSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVR 352 G FHL G +G GAA C S PIYVSVG ISL +A+ V +CC YRVPEP+RQADIRSR ++R Sbjct: 178 GDFFHLKGYSGHFLGAALKSCKKS-SKPIYVSVGHKISLETAVRLVYSCCNYRVPEPIRQADIRSREFLR 246
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|965787498|ref|XP_011964868.2| (PREDICTED: endonuclease V isoform X18 [Ovis aries musimon]) HSP 1 Score: 144.821 bits (364), Expect = 2.507e-37 Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 39 IETEWRADQERRRIAILEVDT--FDR----ASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRK 194 I +W+ +Q + ++++DT + R + L RVGG+D+SF G A A VVLSYP LEVL+E TLT PYV+GFLA+RE P + V++LR+ +P LMPQVL VDGNG+LH RG G+A H+G+LT +P IG AK L V+GLE A+ K Sbjct: 13 ILLDWKREQASLKARVVDLDTEAWQRDPAFSGLQRVGGVDVSFVKDDSG----SACASLVVLSYPELEVLYEDCRMVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPCLMPQVLFVDGNGVLHHRGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNALHK 170
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|803125894|ref|XP_012041852.1| (PREDICTED: endonuclease V isoform X10 [Ovis aries]) HSP 1 Score: 144.821 bits (364), Expect = 3.458e-37 Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 39 IETEWRADQERRRIAILEVDT--FDR----ASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRK 194 I +W+ +Q + ++++DT + R + L RVGG+D+SF G A A VVLSYP LEVL+E TLT PYV+GFLA+RE P + V++LR+ +P LMPQVL VDGNG+LH RG G+A H+G+LT +P IG AK L V+GLE A+ K Sbjct: 25 ILLDWKREQASLKARVVDLDTEAWQRDPAFSGLQRVGGVDVSFVKDDSG----SACASLVVLSYPELEVLYEDCRMVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPCLMPQVLFVDGNGVLHHRGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNALHK 182
BLAST of EWM26526.1 vs. NCBI_GenBank
Match: gi|548509892|ref|XP_005694130.1| (PREDICTED: endonuclease V isoform X2 [Capra hircus]) HSP 1 Score: 145.591 bits (366), Expect = 3.615e-37 Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 39 IETEWRADQERRRIAILEVDT--FDR----ASLTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRK 194 I +W+ +Q + ++++DT + R + L RVGG+D+SF G A A VVLSYP LEVL+E TLT PYV+GFLA+RE P + V++LR+ +P LMPQVL VDGNG+LH RG G+A H+G+LT +P IG AK L V+GLE A+ K Sbjct: 13 ILLDWKREQASLKARVVDLDTEAWQRDPAFSGLQRVGGVDVSFVKDDSG----SACASLVVLSYPELEVLYEDCRMVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPCLMPQVLFVDGNGVLHHRGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNALHK 170 HSP 2 Score: 68.9366 bits (167), Expect = 1.477e-9 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0 Query: 285 GRVFHLVGRAGRVWGAAF-CPSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVR 352 G F L+G +G V G A + P+YVSVG ISL +A+ +CCK+R+PEPVRQADIRSR ++R Sbjct: 180 GDSFPLMGGSGTVLGRALRSHDHSTKPLYVSVGHKISLEAAVRLTHSCCKFRIPEPVRQADIRSRDYIR 248 The following BLAST results are available for this feature:
BLAST of EWM26526.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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