EWM26539.1, cds4133 (CDS) Nannochloropsis gaditana

Overview
NameEWM26539.1
Unique Namecds4133
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:973118..973259 +
Alignment locationCM002462.1:973453..974756 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26539.1
Productmembrane transporter
Orig transcript idgnl|cribi|Naga_101407g1.3603.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:973118..973259 +
CM002462.1supercontigCM002462.1:973453..974756 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR004776Auxin_eff
Homology
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|585108620|gb|EWM26539.1| (membrane transporter [Nannochloropsis gaditana])

HSP 1 Score: 933.324 bits (2411), Expect = 0.000e+0
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0
Query:    1 MSRTRPKPVSLCIHPTKGRKMKAWGMRLGPFGLCMVAVIVSFWVRDTGAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFAFPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            MSRTRPKPVSLCIHPTKGRKMKAWGMRLGPFGLCMVAVIVSFWVRDTGAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFAFPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL
Sbjct:    1 MSRTRPKPVSLCIHPTKGRKMKAWGMRLGPFGLCMVAVIVSFWVRDTGAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFAFPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|585108621|gb|EWM26540.1| (membrane transporter [Nannochloropsis gaditana])

HSP 1 Score: 831.632 bits (2147), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query:   48 GAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFAFPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            GAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFAFPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL
Sbjct:   21 GAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFAFPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 454          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|873237659|emb|CEL97139.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 248.054 bits (632), Expect = 6.138e-73
Identity = 163/429 (38.00%), Postives = 229/429 (53.38%), Query Frame = 0
Query:   95 RFGPRPRTR-LFAFP----SLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGS----------STSQPAYAKSPPSPSPSPTLPS-------------------------RLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLA--QGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            R    PRT  L A P    +L IQ  A + S  AVL L+A   +G+GAA    LDQA+ S LS+L+   FQPA L T++A TLA+P++    LL LP F   QI+ G   G+ +   LR+ P S +G+ L +  +F+N+GPLP+LF +A FR HP DP++  +  +YI+FYL   +P+ W+ G +IL                P +A +      SP+L                           +L  HP   + LSP  + CL G ++G++P LR +   P APL  ++ AL+ +G  + P   LVLAGS     G +S  +       R   + FARF   P  AF LLT+GR   LI  +DP L FVLL+Q CMP AQ +VVILQL+ +P AA  MA  ++L+Y   V+P+ LL+S V  Y G+
Sbjct:   67 RLEVYPRTSSLSALPVSLSNLHIQRGALEASSKAVLELLAL--IGIGAAKRDDLDQAARSVLSKLVRNVFQPAFLCTSIAATLASPAARVRDLLPLPFFCASQIILGSFVGEALLRILRISPKSQSGRRLKMLCSFSNAGPLPILFTNALFRDHP-DPSVMAKVNSYIAFYLTVQAPMMWSYGYSILAGMPTRPVKHHVDEDDPQWADAFADWGMSPSLEQVPPPPRPAPPPFPRSLFLQVRRTVKQLWLHPFRPRLLSPAVISCLAGIVIGTSPLLRQMLVAPGAPLTFIWGALQILGQGFRPAAALVLAGSFVTPSGGESDTVISLRNFRRVLPVAFARFVCAPTIAFTLLTIGRRLGLI-MNDPFLWFVLLMQGCMPAAQQSVVILQLENQPQAATVMAKTLTLLYSLGVIPVALLISLVRGYTGV 491          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|298715555|emb|CBJ28108.1| (AEC family transporter: auxin efflux [Ectocarpus siliculosus])

HSP 1 Score: 223.016 bits (567), Expect = 3.289e-63
Identity = 146/397 (36.78%), Postives = 217/397 (54.66%), Query Frame = 0
Query:  109 SLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTIL--------GSSTSQPAYAKSPPSPSPS---------PTLPSR---LLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQ----GFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            S +I P   K S  AV  L+  C LG+ AA  G+L   +++ LS++++  F P+LL  NVA T  + S   +SLL +PAFA +QI  G          LR++P ++AG+E  +C AF NSG LPL+F +A FR     P L  R VAY SFYL+ WSP FWT+G+ IL        G    + + A+   +  P            LPS+   +   P +R+ LSPP + C+ G ++G +P LR +     APL  ++ A   + +AY P+ +LVLAGSLA      + S + K   L     A+  AR+FL+P     LL  G  + L+P  DP+L FVLL+++CMP AQN+V++LQ+      A   A  +  +YL ++VP+ +LL+  +  + L
Sbjct:  127 SSMINPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSV--ASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKMCMAFQNSGILPLIFLNAMFR---GSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHVHQDKGGGGKKNSAAEGDVAAVPKAKLSLFKRVANLPSKVKSIAESPAVRRVLSPPIVACMTGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTKKTIL-----AVGMARWFLLPLVTSGLLFGGVKYGLVP-PDPMLLFVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKL 512          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|585105204|gb|EWM23919.1| (auxin efflux carrier-like protein [Nannochloropsis gaditana])

HSP 1 Score: 192.586 bits (488), Expect = 3.215e-52
Identity = 138/387 (35.66%), Postives = 209/387 (54.01%), Query Frame = 0
Query:  112 IQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRL---LHHP--LLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLA------------QGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            + P   K S+ AV  L+ +CG+G      G+L + +++ LS +++    P+LL  NVA T+ T      +LL LP F  +QIL        +   +  D  S  G++L V   F N G  P+LFA    R HP DP++ P A++YISFYL+ W+P+FWT G ++L    ++   A+S        TL  R+   + HP   +++ LSPP +G L G  VG +P L  +F GP APL  L +A++T+GSAY    LLVLAGSLA             G +S ++  P L  +  ++C  RF L PA    ++    +   +   D L+ FVL LQ+CMP AQN+V+++QL  R A A  +A ++  +Y  + +P+ +LL+  LQ   L
Sbjct:   93 LDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPL--RTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHP-DPSVLPLAISYISFYLLGWTPIFWTYGYSLL--VPAEAPTAQSIAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSP-LAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIH-PYL--QIASVCLVRFCLCPALCLSIILRAMSTGWV-KLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRQADATRLARMLLYIYSLSCIPISILLTLFLQNFSL 469          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|585105205|gb|EWM23920.1| (auxin efflux carrier-like protein [Nannochloropsis gaditana])

HSP 1 Score: 192.586 bits (488), Expect = 4.665e-52
Identity = 138/387 (35.66%), Postives = 209/387 (54.01%), Query Frame = 0
Query:  112 IQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRL---LHHP--LLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLA------------QGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            + P   K S+ AV  L+ +CG+G      G+L + +++ LS +++    P+LL  NVA T+ T      +LL LP F  +QIL        +   +  D  S  G++L V   F N G  P+LFA    R HP DP++ P A++YISFYL+ W+P+FWT G ++L    ++   A+S        TL  R+   + HP   +++ LSPP +G L G  VG +P L  +F GP APL  L +A++T+GSAY    LLVLAGSLA             G +S ++  P L  +  ++C  RF L PA    ++    +   +   D L+ FVL LQ+CMP AQN+V+++QL  R A A  +A ++  +Y  + +P+ +LL+  LQ   L
Sbjct:  107 LDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPL--RTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHP-DPSVLPLAISYISFYLLGWTPIFWTYGYSLL--VPAEAPTAQSIAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSP-LAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIH-PYL--QIASVCLVRFCLCPALCLSIILRAMSTGWV-KLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRQADATRLARMLLYIYSLSCIPISILLTLFLQNFSL 483          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|873240032|emb|CEL93843.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 185.652 bits (470), Expect = 6.877e-51
Identity = 140/370 (37.84%), Postives = 183/370 (49.46%), Query Frame = 0
Query:  113 QPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFF-GPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
             P  FK S+ AVL L+    +G  A   G+LDQA +  LS L+++  QPA LF +VA T++T     S L  LP FAVLQIL G                         C AF                               I+FYL+ WSP  W+LG  IL          K    PS S  L  R     L+R    PP LGCL GAL G  P+ R+ FF  P+  +  L DA+R +GS YLP VLL LAGSL +GF     +  A   +  A+  ARF +MPA  F ++ L +  SLI  +DP+L F+LLL+ CMP AQNTVVILQ Q +   A SMA  ++ +Y  ++VP+  L+S +L   G+
Sbjct:   29 NPVIFKASLGAVLNLLYVGVIGAIAGHLGVLDQAKIRCLSELVYSIAQPAFLFVSVAETISTTPGGLSLLAPLPVFAVLQILIG-----------------------KRCEAF-------------------------------IAFYLLGWSPFLWSLGYNILADDRD-----KVNNKPSWSGVL--REARDSLVR----PPVLGCLAGALAGGLPWTRSFFFANPSCVVRPLVDAVRNVGSLYLPAVLLTLAGSLYRGFAQGGFRVNAF--QLPAVALARFGVMPAITFAVVRLAQRTSLI-QADPVLMFLLLLEGCMPPAQNTVVILQKQGQREEAESMAQTLAAIYALSLVPLPFLISCILDTAGV 330          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|1210518973|dbj|GAX22255.1| (uncharacterized protein FisN_19Lh325 [Fistulifera solaris])

HSP 1 Score: 182.956 bits (463), Expect = 5.836e-49
Identity = 143/381 (37.53%), Postives = 209/381 (54.86%), Query Frame = 0
Query:  112 IQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGS-SLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGA------ICFA-RFFLMPATAFLLLTLGRAFSLI---PSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            + P   K S++A  +L+++ G+G   A   +LD+ ++  LS+L +  FQP  LF +VA TL + S+    SL ++P   V+QI  G       +   R D      + + +C+ FAN+GPLPL+F+ A     P    L   A A +SFYL+AWSPLFWT G  IL  ++S     K+    S SP    R++    +++ LSPP +G L+G L+GS P L  +FFG    L  +  A +T+G+AYLP V+LVLAGSL       +L++   +S   A        FA RF +MP  A+ +  L     L+    +   +  F+LLLQ C P AQN VV+LQL   PA    MA L++ +Y+A+VVPM LLLS+ L   G+
Sbjct:   58 LNPVVVKASLSATAQLLSALGIGGMLAKRNILDKNAVKALSKLTYHVFQPTFLFVSVARTLRSVSNAQKPSLWIMPIAGVVQIAIGASLALVTSRFFRDDTTR---RHVQMCTTFANAGPLPLIFSAALLEGSP----LAGMAAAAVSFYLLAWSPLFWTFGKIILSGTSS-----KTENGASNSPL--QRVVTG--IKQFLSPPVIGSLIGMLLGSVPRLGNLFFG--GFLQPVTGACQTLGTAYLPAVMLVLAGSLV--LPQDDLENSTAISFKKASPWPFVTLFATRFIVMPLLAYTMCRLLIGAGLLGGHSARSAIFHFILLLQGCTPPAQNAVVLLQLAGLPAQG--MAKLLTGLYVASVVPMTLLLSWCLSTSGV 416          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|1210521747|dbj|GAX19737.1| (uncharacterized protein FisN_19Hh325 [Fistulifera solaris])

HSP 1 Score: 182.57 bits (462), Expect = 6.476e-49
Identity = 142/383 (37.08%), Postives = 206/383 (53.79%), Query Frame = 0
Query:  109 SLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGS-SLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGA-----ICFA-RFFLMPATAFLLLTLGRAFSLI---PSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
            S  + P   K S++A  +L+++ G+G   A   +LD+ ++  LS+L +  FQP  LF +VA TL + S     SL ++P   ++QI  G       +   R D      + + +C+ FAN+GPLPL+F+ A     P    L   A A +SFYL+AWSPLFWT G  IL   +S      +  S SP   + S       L++ LSPP +G L+G L+GS P L  +FFG    L  +  A +T+G+AYLP V+LVLAGSL    +  + +  A+ S+  +       FA RF +MP  A  +  L     L+    +   +  F+LLLQ C P AQN VV+LQL   PA    MA L++ +Y+A+VVPM LLLS+ L   G+
Sbjct:   55 SAALNPVVVKASLSATAQLLSALGIGGMLAKRNILDKNAVKALSKLTYHIFQPTFLFVSVARTLRSVSDAQKPSLWIMPIAGIVQIAIGATLAMVTSRFFRDDTTR---RHVQMCTTFANAGPLPLIFSAALLEGSP----LAGMAAAAVSFYLLAWSPLFWTFGKIILSGPSSNTV---NGASDSPLQKVVSG------LKQFLSPPVIGSLIGMLLGSVPRLGNLFFGGV--LQPVTGACQTLGTAYLPAVMLVLAGSLVLP-QDDSEQSTAISSKKSSPWPFVTLFATRFMVMPLLAHTMCRLLIGAGLLGEHSARSAIFHFILLLQGCTPPAQNAVVLLQLAGLPAQG--MAKLLTGLYVASVVPMTLLLSWCLSTSGV 416          
BLAST of EWM26539.1 vs. NCBI_GenBank
Match: gi|1072221630|gb|OEU06413.1| (hypothetical protein FRACYDRAFT_254571 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 116.701 bits (291), Expect = 9.173e-25
Identity = 104/399 (26.07%), Postives = 173/399 (43.36%), Query Frame = 0
Query:  139 SHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQ----------ILFGFLY----GKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPT--DPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGP------TAPL-AALFDALRTMGSAYLPTVLLVL------------------AGSLAQGFKSLNLKDPALLS----------RTGAICFARFFLMPATAFLLLTLGRA--FSLIPS---SDP----LLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQ 477
             + L++Q ++S LS   +    P  L TN+  T+   +    S + LP  A LQ          I+F  L     G  +  S  +   SD G+ +++CS+F N G +PL+F ++ F    +  D  L   +   ++ +LV WSP FW  G +IL    +  + +K             + +    L+  L PP +G  +G ++ + P +R +F         ++PL   +FD ++  G A  P  LLVL                   GS   G KS N       S          R G + F RF + P   + LL +  +    LI S   +D     ++ F+ +L++ MP AQN V +L +  +   A  MAT +  +Y  +++P+ ++LS  LQ
Sbjct:   42 DYKLINQTTISALSSTTYKILLPMFLGTNIIKTITKTNGLTKSSMTLPLLASLQSFILYMITTKIIFPLLLLLDDGSNIVDSNTI-RNSDDGRGISICSSFGNGGVVPLIFCESLFGRSSSSGDNDLLAISTGCVALFLVGWSPFFWGFGRSILLGDDANASSSKDK-----------KTIIANKLKSMLPPPVIGVFIGMIIATIPIIRKLFITNDVGASVSSPLFGVVFDTMQNFGKAASPLSLLVLVSSLALGAGFGSGSTSATTGSTRTGTKSKNESTDTTSSTIVYEIPFWKRWGIVSFMRFIISPIIMYSLLKVVSSPQIGLIDSYKTTDSTYTSMIWFICILESIMPPAQNQVTLLHVANKTDKANEMATFLFFIYTTSMIPLVIILSMALQ 428          
The following BLAST results are available for this feature:
BLAST of EWM26539.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108620|gb|EWM26539.1|0.000e+0100.00membrane transporter [Nannochloropsis gaditana][more]
gi|585108621|gb|EWM26540.1|0.000e+0100.00membrane transporter [Nannochloropsis gaditana][more]
gi|873237659|emb|CEL97139.1|6.138e-7338.00unnamed protein product [Vitrella brassicaformis C... [more]
gi|298715555|emb|CBJ28108.1|3.289e-6336.78AEC family transporter: auxin efflux [Ectocarpus s... [more]
gi|585105204|gb|EWM23919.1|3.215e-5235.66auxin efflux carrier-like protein [Nannochloropsis... [more]
gi|585105205|gb|EWM23920.1|4.665e-5235.66auxin efflux carrier-like protein [Nannochloropsis... [more]
gi|873240032|emb|CEL93843.1|6.877e-5137.84unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210518973|dbj|GAX22255.1|5.836e-4937.53uncharacterized protein FisN_19Lh325 [Fistulifera ... [more]
gi|1210521747|dbj|GAX19737.1|6.476e-4937.08uncharacterized protein FisN_19Hh325 [Fistulifera ... [more]
gi|1072221630|gb|OEU06413.1|9.173e-2526.07hypothetical protein FRACYDRAFT_254571 [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4143rna4143Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications