EWM26560.1, cds4124 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|585108645|gb|EWM26560.1| (methionine aminopeptidase [Nannochloropsis gaditana]) HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0 Query: 1 MKVAAACQRLRHDPRRYARLRQSCIPRATHGTPVRNFFSFGKEERANERGGRRGASVPPRPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344 MKVAAACQRLRHDPRRYARLRQSCIPRATHGTPVRNFFSFGKEERANERGGRRGASVPPRPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE Sbjct: 1 MKVAAACQRLRHDPRRYARLRQSCIPRATHGTPVRNFFSFGKEERANERGGRRGASVPPRPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|224000543|ref|XP_002289944.1| (probable methionone aminopeptidase, partial [Thalassiosira pseudonana CCMP1335] >gi|220975152|gb|EED93481.1| probable methionone aminopeptidase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 323.553 bits (828), Expect = 1.528e-107 Identity = 155/251 (61.75%), Postives = 187/251 (74.50%), Query Frame = 0 Query: 98 ILLHTPESIEKMRAAGRLARKMLDYTC--SLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGL---RLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLP 343 +L+H +SI KMR A +LARK+LDY C S+ R G TTE+ID +HDA LA+ AYPSPLNY GFPKS+CSS+NEVV HGIPD R L+ GD+ FD+S + GVHGDNCA++ VG+V+ E + RL+ AA E+ G+ AC PG CLS IGSA+HAVAD Y Y+TVR Y GHG+ D H P+V HYRN E + L PGMIFTIEPML E E W+D WTVV+KDGGR AQFEHTVLIT+ GVEVLT+P Sbjct: 1 VLIHDADSIAKMRKAAQLARKLLDYACHPSIARAGTTTEQIDSLIHDAALANSAYPSPLNYMGFPKSLCSSVNEVVCHGIPDTRRLELGDVVSFDVSCFVGGVHGDNCATIVVGDVNDEFVTARRLVQAALESRDEGVRACKPGGCLSDIGSAIHAVADAYGYDTVRHYRGHGISSDFHCAPYVKHYRNNEGMELIPGMIFTIEPMLTEGMAECDEWSDNWTVVTKDGGRAAQFEHTVLITDTGVEVLTVP 251
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|1210525492|dbj|GAX15561.1| (methionyl aminopeptidase [Fistulifera solaris]) HSP 1 Score: 312.383 bits (799), Expect = 5.085e-102 Identity = 158/302 (52.32%), Postives = 206/302 (68.21%), Query Frame = 0 Query: 55 ASVPP--RPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPS--PSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGL--------RLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344 A+ PP R P+ ++P R +P++ P +P YA TG++PP I LHT + +E +R A RLAR++LD CS V+PG+T++EID VH+AI+ GAYPSPLNY GFPKS+C+SINEV+ HGIPD RP Q GD+ D+S Y QGVHGDNCA++ VG+ D EG RL+ A KE+L A I C PG+CL+ IG+A+ VAD Y Y++V Y GHG+G + H PFV H+RN + L L+ GM+FTIEPML + W D WTV + DG AQFEHTV IT+DGVE+LTLP+ Sbjct: 32 ATAPPFVRSPVQKYPLTPTRNVPSHIP--RPPYARTGRVPPSVWLHQIALHTEDPVE-LRNAARLARRVLDLACSSVQPGMTSDEIDAIVHEAIVRHGAYPSPLNYEGFPKSVCTSINEVICHGIPDLRPFQYGDVVSLDVSCYLQGVHGDNCATILVGD-DEEGSDLQLAPARRLIQATKESLDAAIATCRPGSCLTSIGAAIQDVADSYGYQSVEKYRGHGIGTEFHCAPFVKHFRNHDYLRLQKGMVFTIEPMLTAGSADCFEWDDQWTVATSDGSLAAQFEHTVYITDDGVEILTLPD 329
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|219110801|ref|XP_002177152.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411687|gb|EEC51615.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 308.916 bits (790), Expect = 1.194e-100 Identity = 150/287 (52.26%), Postives = 197/287 (68.64%), Query Frame = 0 Query: 60 RPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPP--SPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344 R P+ S + +P++ +V+P YAD+G LP I+LH S+++M A RLAR +LD CSL +PG+TT+EID VH+AI+ + AYPSPLNY FPKS+CSS+NEV+ HGIPD RPLQ GDI FD+S + GVHGDNCA+V VG+ E + AA+E+L AGI+ C PG+CLS +GSA+ VA+ Y +V Y GHG+ + H+ P+V HYRN +++ L+PGMIFTIEPML W D WTV + DG AQFEHT+ ITE+GVE+LTLPE Sbjct: 43 RTPIIAYPQSATKKVPSH--IVRPPYADSGILPVSRYGDDIVLHDKVSLKRMTDAARLARSVLDLACSLAKPGVTTDEIDTAVHEAIVEANAYPSPLNYCWFPKSLCSSVNEVICHGIPDYRPLQFGDIVSFDVSCFLNGVHGDNCATVIVGD-SQEKDEGVQAARESLYAGIETCKPGSCLSSVGSAIQDVAESYGLSSVEKYRGHGIADEFHIAPYVKHYRNTDKVVLKPGMIFTIEPMLTNGASTCYEWDDDWTVATADGSLAAQFEHTIHITENGVEILTLPE 326
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|1210522040|dbj|GAX19093.1| (methionyl aminopeptidase [Fistulifera solaris]) HSP 1 Score: 302.368 bits (773), Expect = 4.120e-98 Identity = 152/295 (51.53%), Postives = 197/295 (66.78%), Query Frame = 0 Query: 60 RPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPS--PSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGL--------RLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344 R P+ ++P R +P+ P +P YA TG++ P I LHT + +E +R A RLAR++LD C+ V+PG+T+++ID VH+ IL GAYPSPLNY GFPKS+C+SINEV+ HGIPD RP Q GD+ D+S Y QGVHGDNCA++ VG+ D EG RL+ A KE+L A I C PG+CL+ IG+A+ VAD Y Y +V Y GHG+G + H PFV H+RN + L L+ GM+FTIEPML + W D WTV + DG AQFEHTV ITEDG E+LTLP+ Sbjct: 35 RSPVQKYPLTPTRHVPSYIP--RPPYARTGRVSPSVWLHQIALHTEDPVE-LRNAARLARRVLDLACASVQPGMTSDDIDAIVHETILRHGAYPSPLNYEGFPKSVCTSINEVICHGIPDLRPFQYGDVVSLDVSCYLQGVHGDNCATILVGD-DEEGSDVQLAPARRLIQATKESLDAAIATCRPGSCLTSIGAAIQDVADSYGYHSVEKYRGHGIGTEFHCAPFVKHFRNHDYLRLQKGMVFTIEPMLTAGCADCFEWDDQWTVATSDGSLAAQFEHTVYITEDGAEILTLPD 325
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|676387287|ref|XP_009036922.1| (hypothetical protein AURANDRAFT_60085 [Aureococcus anophagefferens] >gi|323452314|gb|EGB08188.1| hypothetical protein AURANDRAFT_60085 [Aureococcus anophagefferens]) HSP 1 Score: 296.204 bits (757), Expect = 4.269e-96 Identity = 150/279 (53.76%), Postives = 191/279 (68.46%), Query Frame = 0 Query: 66 GHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344 GHVSP RA+PA+ + +P+Y+ TG + P P+ + E+I+ +RAAGRLAR+MLD+ CSL PG++T+ ID VH+AI+A+GAYP+P NY GFPKSIC++ NEV+ HGIPD R L+EGDI FD+S+Y GV GDNC +V VG D L+ + AL + PGACL+ IG A A +Y VR Y GHG+G H P V H RN + L PG +FTIEPML E PE+ DGWTVV++DGGR AQFEHTVL+T+DG EVLTLPE Sbjct: 21 GHVSPWRAIPAS--IERPSYSSTGLVLPAPPAATVADAETIDALRAAGRLARRMLDFACSLAAPGVSTDAIDAEVHEAIVAAGAYPAPYNYMGFPKSICAAPNEVICHGIPDSRILEEGDIVSFDVSIYAGGVFGDNCGTVAVGAADDAANALVATTQRALDDALATVKPGACLTAIGDACADAAATRDYGVVRQYCGHGIGRVFHAPPLVQHCRNRDAFTLVPGHVFTIEPMLTERSPELYVADDGWTVVTRDGGRAAQFEHTVLVTDDGHEVLTLPE 297
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|1183363727|gb|ORX90461.1| (methionine aminopeptidase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 292.738 bits (748), Expect = 6.826e-95 Identity = 142/271 (52.40%), Postives = 183/271 (67.53%), Query Frame = 0 Query: 71 RRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLT 341 RR++PA+ ++ PNYA TG+ P S SI + TPE IEKMR AGRLARKMLD LV+ GITT+EIDR +H+ I+ AYPS LNY GFPKS+C+S+N V+ HGIPD RPLQ+GDI DI+++ GVHGDN A+ VG VD +G L+ A K +L +D C PG IG + A+ + SGHG+G + H P +LH+RN E ++PGM FTIEP+L + TW D WT+V+ D GR AQFEHT+LIT+DGVE+LT Sbjct: 17 RRSVPAH--ILHPNYAKTGEPPAWSASIDIKTPEEIEKMREAGRLARKMLDIGGQLVKVGITTDEIDRILHEEIVQHNAYPSTLNYMGFPKSVCTSVNNVIAHGIPDSRPLQDGDIINIDITVFLNGVHGDNSATFYVGNVDQKGRELVEATKRSLDLAVDICKPGTPFQEIGRVICDYAESKGFSVSTELSGHGIGREFHSLPLILHHRNHEEGVMQPGMTFTIEPILCQGTAVGMTWPDRWTIVTADAGRSAQFEHTLLITQDGVEILT 285
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|159479314|ref|XP_001697738.1| (methionine aminopeptidase [Chlamydomonas reinhardtii] >gi|158274106|gb|EDO99890.1| methionine aminopeptidase [Chlamydomonas reinhardtii]) HSP 1 Score: 293.508 bits (750), Expect = 1.649e-94 Identity = 141/282 (50.00%), Postives = 185/282 (65.60%), Query Frame = 0 Query: 60 RPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLT 341 RPP+ G VSP+ +PA+ + +P YAD G PP + +H E KMRA+GRLA ++L+Y SLVRPGITT+EID+ VH I+ +GAYPSPLNY FPKS+C+S+NE V HGIPDDR L+EGDI D+++Y G HGD VGEVD +L +EAL I C PG + IG + +ADK++Y +R Y GHGVG H P + HY+N + ++ G FTIEPM+++ G + TW D WTVV+KD G AQFEHT+LITE G ++LT Sbjct: 54 RPPLKQGKVSPKSPVPAH--IRRPPYADKGNFPPWADRSQVHNEEGKRKMRASGRLAAQVLEYAGSLVRPGITTDEIDKAVHAMIIENGAYPSPLNYGKFPKSVCTSVNECVCHGIPDDRALEEGDILNIDVTVYLDGYHGDTSRMFYVGEVDPAAKKLCEVTQEALLEAIKKCAPGVPYNAIGKTIQTIADKHKYGVIRDYVGHGVGAAFHSHPTIFHYKNTQPGVMQLGETFTIEPMIVQGGIKCDTWRDNWTVVTKDRGLCAQFEHTILITETGADILT 333
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|674964810|emb|CDX69272.1| (BnaC01g01810D [Brassica napus]) HSP 1 Score: 290.426 bits (742), Expect = 4.208e-93 Identity = 137/282 (48.58%), Postives = 186/282 (65.96%), Query Frame = 0 Query: 60 RPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLT 341 R + PGHVSPRR +PA+ + KP Y ++ K+P S + +H + +E+MRA+GRLA ++ +Y +LV+PG+TT+EID VH+ I+ +GAYPSPL Y GFPKS+C+S+NE + HGIPD RPL++GDI D+++Y G HGD A+ G+VD + +L+ KE+L I CGPG IG +H ADKY+Y VR + GHGVG H P VLH+RN E + FTIEPML + W D WTVV++D AQFEHT+LIT+DG E+LT Sbjct: 70 RKRLKPGHVSPRRPVPAH--ITKPPYVESLKVPGISSGLEIHDEDGVERMRASGRLAARVREYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGDVDEKAKKLVQVTKESLDKAISICGPGVEYKKIGKIIHDHADKYKYGVVRQFVGHGVGRVFHADPVVLHFRNNEAGRMVLNQTFTIEPMLTIGSRKPIMWDDNWTVVTEDASLSAQFEHTILITKDGAEILT 349
BLAST of EWM26560.1 vs. NCBI_GenBank
Match: gi|922407255|ref|XP_013616466.1| (PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial [Brassica oleracea var. oleracea]) HSP 1 Score: 290.426 bits (742), Expect = 5.117e-93 Identity = 137/282 (48.58%), Postives = 186/282 (65.96%), Query Frame = 0 Query: 60 RPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLT 341 R + PGHVSPRR +PA+ + KP Y ++ K+P S + +H + +E+MRA+GRLA ++ +Y +LV+PG+TT+EID VH+ I+ +GAYPSPL Y GFPKS+C+S+NE + HGIPD RPL++GDI D+++Y G HGD A+ G+VD + +L+ KE+L I CGPG IG +H ADKY+Y VR + GHGVG H P VLH+RN E + FTIEPML + W D WTVV++D AQFEHT+LIT+DG E+LT Sbjct: 70 RKRLKPGHVSPRRPVPAH--ITKPPYVESLKVPGISSGLEIHDEDGVERMRASGRLAARVREYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGDVDEKAKKLVQVTKESLDKAISICGPGVEYKKIGKIIHDHADKYKYGVVRQFVGHGVGRVFHADPVVLHFRNNEAGRMVLNQTFTIEPMLTIGSRKPIMWDDNWTVVTEDASLSAQFEHTILITKDGAEILT 349 The following BLAST results are available for this feature:
BLAST of EWM26560.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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