EWM30356.1, cds412 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|585113015|gb|EWM30356.1| (subunit of proteaseome activator complex [Nannochloropsis gaditana]) HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 Query: 1 MSSNSSNTKAVAALAEELKQKGMVTFKEEFPAKIALLTSLLENELLRLENDAVLPPESEVTPVIPPISSSEEKGETSAAGGRRKKRKMTETQQAAASVIPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSIKDQSFGSRMTI 286 MSSNSSNTKAVAALAEELKQKGMVTFKEEFPAKIALLTSLLENELLRLENDAVLPPESEVTPVIPPISSSEEKGETSAAGGRRKKRKMTETQQAAASVIPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSIKDQSFGSRMTI Sbjct: 1 MSSNSSNTKAVAALAEELKQKGMVTFKEEFPAKIALLTSLLENELLRLENDAVLPPESEVTPVIPPISSSEEKGETSAAGGRRKKRKMTETQQAAASVIPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSIKDQSFGSRMTI 286
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|754341754|ref|XP_004364884.2| (proteaseome 28 subunit [Capsaspora owczarzaki ATCC 30864] >gi|765547729|gb|KJE88350.1| proteaseome 28 subunit [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 147.517 bits (371), Expect = 7.783e-39 Identity = 82/272 (30.15%), Postives = 147/272 (54.04%), Query Frame = 0 Query: 9 KAVAALAEELKQKGMVTFKEEFPAKIALLTSLLENELLRLENDAV--------LPPESEVTPVIPPISSSEEKGETSAA---GGRRKKRKMTETQQAAASVIPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKN 269 K V L E + + E P K+A L +++ +++ R+ + ++ LP ES+ T I + + G ++ G KKR++ + A + V A + ++ + + + G + TH +P NK I +++++L+KE +E + CVK+WIQL+IP +E G VGVQ E + EL + E+ + L+S +KY+Q RAKL +K+ ++ ++ DYRQS++E D +Y NL++ +LRN+Y + YD+++KN Sbjct: 25 KKVDTLRESFTSRAEILVHETMPEKVAQLDAIITSDIFRITDLSLVESPLGIPLPFESDATKDINTLVLATASGSSAGVKLESGISKKRRLEDDDGAPSVVTTATNGESAAKPAFQALDREPRG----------FSTTHTALIPSNKLIQRILDMLKKEIEELFNICNCVKMWIQLNIPRVEGGNNLGVGVQVETVDELGKAEESGFALLDSMSKYYQMRAKLVSKVLKYPTIEDYRQSVVEFDQKQYTNLRVCVLDLRNNYAILYDVINKN 286
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|470475798|ref|XP_004342191.1| (proteasome activator protein [Acanthamoeba castellanii str. Neff] >gi|440799020|gb|ELR20081.1| proteasome activator protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 132.109 bits (331), Expect = 7.459e-34 Identity = 61/135 (45.19%), Postives = 92/135 (68.15%), Query Frame = 0 Query: 139 AVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKL 273 AVP NK + +V+ +++E +++ VK+WIQLSIP IE+G F V +Q + I EL+R ED AY+ LE TKY+ TR KL +K+ +H + DY S++E D EYLN++++ +LRN+ + YDLLSKN D++ Sbjct: 83 AVPVNKALARVVPAIKEEILAVIDIFNSVKIWIQLSIPRIEAGNTFGVDIQTDTISELSRAEDAAYSLLEGITKYYVTRGKLISKVLKHPEIEDYSLSVVELDEKEYLNMRLSTLDLRNNMAIIYDLLSKNWDRI 217
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|829082559|ref|XP_012647695.1| (proteasome activator subunit 2 (PA28 beta) [Babesia microti strain RI] >gi|399216398|emb|CCF73086.1| proteasome activator subunit 2 (PA28 beta) [Babesia microti strain RI]) HSP 1 Score: 130.183 bits (326), Expect = 5.296e-33 Identity = 64/149 (42.95%), Postives = 100/149 (67.11%), Query Frame = 0 Query: 125 GRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKL 273 GR G + VP ++ I++ +E ++ E E +E+VG +KLWIQL+IP IE G F VG+QEEVIQEL R ED A+N ++ KY+ RAKL K+ ++ +V DY++++ E D E+++ K+A ++RN+Y + Y+LLSKN +K+ Sbjct: 82 GREG--------ELIVPSHRQIVEELERIKDEASELIEMVGNIKLWIQLNIPRIEDGNNFGVGIQEEVIQELARVEDSAFNLFDAIVKYYMARAKLSTKVIKYPNVLDYQEAIRELDEKEWIHTKIAKVDMRNNYSMLYELLSKNWEKV 222
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|749160429|ref|XP_011131843.1| (proteasome activator complex subunit 3 [Gregarina niphandrodes] >gi|608659585|gb|EZG54456.1| proteasome activator complex subunit 3 [Gregarina niphandrodes]) HSP 1 Score: 130.954 bits (328), Expect = 7.914e-33 Identity = 86/274 (31.39%), Postives = 130/274 (47.45%), Query Frame = 0 Query: 14 LAEELKQKGMVTFKEEFPAKIALLTSLL--ENELLRLENDAVLPPESEVTPVIPPISSSEEKGETSAAGGRRKKRKMTETQQAAASVIPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSIKDQSFGSRMT 285 EE+ +K + +E P K+ ++ E + L N P + E+ + I SE+ G+R + + ETQ +P +Y +D N IMK IE ++ E E +ELV VKLWIQL+IP IE G F V +QE+VI EL+R E+ A+N +S +KYF RAKL K+ ++ +V DYR +L E D ++ +K+ + RN+Y + YD+L KN K+ + GS M Sbjct: 28 FKEEVTKKALQVLQEIIPRKMKEFDDVMPISAEPMSLMNVQDFPADDEMYRIPNIILLSEKDACVKNENGKRLRTESVETQPGVVMKLP--------------------------------EYIYDAKALSNSVIMKRIERMKTESAELLELVASVKLWIQLNIPRIEDGNNFGVAIQEDVIHELSRVEEAAFNLRDSASKYFLQRAKLITKIIKYPNVEDYRNTLKELDEKQWFQMKVTDMDTRNNYAIIYDMLYKNWHKVVRPRTTDGSMMV 269
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|115814262|ref|XP_790819.2| (PREDICTED: proteasome activator complex subunit 3 [Strongylocentrotus purpuratus]) HSP 1 Score: 129.413 bits (324), Expect = 1.534e-32 Identity = 81/269 (30.11%), Postives = 135/269 (50.19%), Query Frame = 0 Query: 5 SSNTKAVAALAEELKQKGMVTFKEEFPAKIALLTSLLENELLRLENDAVLPPESEVTPVIPPISSSEEKGETSAAGGRRKKRKMTETQQAAASVIPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKL 273 + + + V A ++L Q K FP KI L L+E++L +L + + + PV P+ + G KKRK H + + ++ L G VPCNK + ++I++L+ + +E +K+WIQL IP IE G F V VQE+ + EL + E A YL+ ++Y+ TR KL +K++++ V DYR+S++E D E++NL++ ELRN+YL +D+++KN+DK+ Sbjct: 3 NDDPREVTACKDKLHQMSENLVKVLFPQKIGELGELVESDLFKLSRMSEVVCNINI-PVPAPVILNNSDGVDDGLKAHAKKRK---------------------HDSGNDVTGCKVFSLPGG------------TVPCNKELCELIDILKPKICCLIENCNTLKMWIQLQIPRIEDGNNFGVSVQEDTLSELRQVESEAAAYLDQISRYYITRGKLISKVAKYPHVDDYRRSIIEIDEKEFINLRLTCLELRNTYLSLHDVITKNKDKI 237
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|1102623140|emb|CRG99287.1| (subunit of proteaseome activator complex, putative [Plasmodium relictum]) HSP 1 Score: 129.028 bits (323), Expect = 4.139e-32 Identity = 64/153 (41.83%), Postives = 102/153 (66.67%), Query Frame = 0 Query: 134 YTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSIKDQSFGSRMT 285 YTH VP +K I +E ++ E +E++G +KLWIQL++P IE G F VG+QEE IQEL R E+ A+N ++ KY+ RAKL K+ ++ +VYDY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + K++ RMT Sbjct: 125 YTH--YVPSHKQIYSELEKIKAYASELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNVYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLYKNWEKVVKPKNEDAHHRMT 275
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|1103663626|emb|CRG96624.1| (subunit of proteaseome activator complex, putative [Plasmodium gallinaceum]) HSP 1 Score: 129.028 bits (323), Expect = 4.228e-32 Identity = 64/154 (41.56%), Postives = 102/154 (66.23%), Query Frame = 0 Query: 134 YTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSIKDQSFGSRMTI 286 YTH VP +K I +E ++ E +E++G +KLWIQL++P IE G F VG+QEE IQEL R E+ A+N ++ KY+ RAKL K+ ++ +VYDY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + K++ RMT Sbjct: 125 YTH--YVPSHKQIYAELEKIKAYASELIEVIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNVYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLYKNWEKVVKPKNEDAHHRMTF 276
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|156097164|ref|XP_001614615.1| (proteasome activator complex subunit 3 [Plasmodium vivax Sal-1] >gi|148803489|gb|EDL44888.1| proteasome activator complex subunit 3, putative [Plasmodium vivax] >gi|901863807|gb|KMZ81342.1| proteasome activator complex subunit 3 [Plasmodium vivax India VII] >gi|901873239|gb|KMZ87563.1| proteasome activator complex subunit 3 [Plasmodium vivax Brazil I] >gi|901881948|gb|KMZ93885.1| proteasome activator complex subunit 3 [Plasmodium vivax Mauritania I] >gi|901891375|gb|KNA00528.1| proteasome activator complex subunit 3 [Plasmodium vivax North Korean] >gi|1074116653|emb|SCO66398.1| subunit of proteaseome activator complex, putative [Plasmodium vivax] >gi|1074121929|emb|SCO71832.1| subunit of proteaseome activator complex, putative [Plasmodium vivax] >gi|1105163088|emb|SGX76599.1| subunit of proteaseome activator complex, putative [Plasmodium vivax]) HSP 1 Score: 128.642 bits (322), Expect = 5.683e-32 Identity = 64/154 (41.56%), Postives = 102/154 (66.23%), Query Frame = 0 Query: 134 YTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSIKDQSFGSRMTI 286 YTH VP +K I +E ++ E +E++G +KLWIQL++P IE G F VG+QEE IQEL R E+ A+N ++ KY+ RAKL K+ ++ +VYDY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + K++ RMT Sbjct: 125 YTH--YVPSHKQINAELEKIKAYSSELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMDRAKLSTKVIKYPNVYDYQEAVRELDEKEWVHIKITIIDMRNNYIMLYDLLCKNWEKVVKPKNEDAHHRMTF 276
BLAST of EWM30356.1 vs. NCBI_GenBank
Match: gi|1049455254|emb|SBT70853.1| (subunit of proteaseome activator complex, putative [Plasmodium malariae]) HSP 1 Score: 128.642 bits (322), Expect = 6.645e-32 Identity = 63/154 (40.91%), Postives = 103/154 (66.88%), Query Frame = 0 Query: 134 YTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSIKDQSFGSRMTI 286 YTH VP +K I + +E ++ E +E++G +KLWIQL++P IE G F VG+QEE IQEL R E+ A+N ++ KY+ RAKL K+ ++ ++YDY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + K++ RMT Sbjct: 129 YTH--YVPSHKQIYEELEKIKSYASELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNIYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLFKNWEKVVKPKNEDAHHRMTF 280 The following BLAST results are available for this feature:
BLAST of EWM30356.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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