EWM26548.1, cds4106 (CDS) Nannochloropsis gaditana

Overview
NameEWM26548.1
Unique Namecds4106
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:898958..899461 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26548.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100084g23.1556.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:898958..899461 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26548.1 vs. NCBI_GenBank
Match: gi|585108633|gb|EWM26548.1| (hypothetical protein Naga_100084g23 [Nannochloropsis gaditana])

HSP 1 Score: 312.383 bits (799), Expect = 2.996e-107
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 
Query:    1 MGPGGHYPAAMYGGMGMGHPGMGGRGGRGGRTPKGDRGRGGFLGGGKGLAGGPGRGTAKARGSGHMGVPHGYIPYQQQSSPQVAPGPGANGPAASQAPPSPAAHEHDVVPPISPSGKGFEPTGRPAPAQGASSAQPPTSSTYRTSSVTDSAEAVKSSGTPASDSGSK 167
            MGPGGHYPAAMYGGMGMGHPGMGGRGGRGGRTPKGDRGRGGFLGGGKGLAGGPGRGTAKARGSGHMGVPHGYIPYQQQSSPQVAPGPGANGPAASQAPPSPAAHEHDVVPPISPSGKGFEPTGRPAPAQGASSAQPPTSSTYRTSSVTDSAEAVKSSGTPASDSGSK
Sbjct:    1 MGPGGHYPAAMYGGMGMGHPGMGGRGGRGGRTPKGDRGRGGFLGGGKGLAGGPGRGTAKARGSGHMGVPHGYIPYQQQSSPQVAPGPGANGPAASQAPPSPAAHEHDVVPPISPSGKGFEPTGRPAPAQGASSAQPPTSSTYRTSSVTDSAEAVKSSGTPASDSGSK 167
The following BLAST results are available for this feature:
BLAST of EWM26548.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108633|gb|EWM26548.1|2.996e-107100.00hypothetical protein Naga_100084g23 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4116rna4116Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications