EWM26655.1, cds4097 (CDS) Nannochloropsis gaditana

Overview
NameEWM26655.1
Unique Namecds4097
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:868070..868161 -
Alignment locationCM002462.1:867844..867976 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26655.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g5.8166.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:868070..868161 -
CM002462.1supercontigCM002462.1:867844..867976 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM26655.1 vs. NCBI_GenBank
Match: gi|585108743|gb|EWM26655.1| (hypothetical protein Naga_100001g5 [Nannochloropsis gaditana])

HSP 1 Score: 152.14 bits (383), Expect = 9.136e-47
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 
Query:    1 MFFKNQPSSSPAYRMAAWGVAIVGLVAWTYWDQKKETDTRFTSEEAAKWNERVKGKTKARAAQPPTDGGKPSAP 74
            MFFKNQPSSSPAYRMAAWGVAIVGLVAWTYWDQKKETDTRFTSEEAAKWNERVKGKTKARAAQPPTDGGKPSAP
Sbjct:    1 MFFKNQPSSSPAYRMAAWGVAIVGLVAWTYWDQKKETDTRFTSEEAAKWNERVKGKTKARAAQPPTDGGKPSAP 74
The following BLAST results are available for this feature:
BLAST of EWM26655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108743|gb|EWM26655.1|9.136e-47100.00hypothetical protein Naga_100001g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4107rna4107Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications