EWM30235.1, cds409 (CDS) Nannochloropsis gaditana

Overview
NameEWM30235.1
Unique Namecds409
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1016381..1016486 -
Alignment locationCM002455.1:1016230..1016311 -
Alignment locationCM002455.1:1015694..1016129 -

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Properties
Property NameValue
Protein idEWM30235.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g76.1752.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1016381..1016486 -
CM002455.1supercontigCM002455.1:1016230..1016311 -
CM002455.1supercontigCM002455.1:1015694..1016129 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30235.1 vs. NCBI_GenBank
Match: gi|585112894|gb|EWM30235.1| (hypothetical protein Naga_100003g76 [Nannochloropsis gaditana])

HSP 1 Score: 424.476 bits (1090), Expect = 2.006e-150
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 
Query:    1 MCGDPHEESTKPLVKESCSEEDQSAAGVGSGVEPARIAYTLSRLLSHSLSLNKWKIVDSIAGSNSIRTRIDAGTGWSDGYGGSKRSGWEFDRNETVNLGEKWKRNGWAEWRTHLVESIKFIECIRPCVDVHTIAEDEGVPCRSSKRIIHTCIISARYRTDSGVATMVVWPEDWFRVFKASETRLPSDRLCHPNPPFIERTSCSVRQE 207
            MCGDPHEESTKPLVKESCSEEDQSAAGVGSGVEPARIAYTLSRLLSHSLSLNKWKIVDSIAGSNSIRTRIDAGTGWSDGYGGSKRSGWEFDRNETVNLGEKWKRNGWAEWRTHLVESIKFIECIRPCVDVHTIAEDEGVPCRSSKRIIHTCIISARYRTDSGVATMVVWPEDWFRVFKASETRLPSDRLCHPNPPFIERTSCSVRQE
Sbjct:    1 MCGDPHEESTKPLVKESCSEEDQSAAGVGSGVEPARIAYTLSRLLSHSLSLNKWKIVDSIAGSNSIRTRIDAGTGWSDGYGGSKRSGWEFDRNETVNLGEKWKRNGWAEWRTHLVESIKFIECIRPCVDVHTIAEDEGVPCRSSKRIIHTCIISARYRTDSGVATMVVWPEDWFRVFKASETRLPSDRLCHPNPPFIERTSCSVRQE 207
The following BLAST results are available for this feature:
BLAST of EWM30235.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112894|gb|EWM30235.1|2.006e-150100.00hypothetical protein Naga_100003g76 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna409rna409Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications