EWM26621.1, cds4077 (CDS) Nannochloropsis gaditana

Overview
NameEWM26621.1
Unique Namecds4077
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:823526..825595 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26621.1
Productrna polymerase ii ctd phosphatase
Orig transcript idgnl|cribi|Naga_100001g25.8132.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:823526..825595 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
IPR001357BRCT_dom
IPR004274NIF
Homology
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|585108709|gb|EWM26621.1| (rna polymerase ii ctd phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 1400.96 bits (3625), Expect = 0.000e+0
Identity = 689/689 (100.00%), Postives = 689/689 (100.00%), Query Frame = 0
Query:    1 MAKRRPRPTATSLNGTQGVGTCDNGNGGTRAYDTETLELDLEGQGLRPLTVSWGRRQGDRVKVGAELAQVICERLDGGGKVVRRLKAQHTGRLEEVVAPDLSGLRRPGTDVGREGPEAKEPEERPLPPPRLVLGKLRYCTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERLDHQKLEVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVLPGCMSTVVQCRKKGVKETLPVFGGDGCEPGGESQEAKEQRFDNKSDEDNERMSKRPKGAAEKMEHADGDGEDATAEALVAALEDELG 689
            MAKRRPRPTATSLNGTQGVGTCDNGNGGTRAYDTETLELDLEGQGLRPLTVSWGRRQGDRVKVGAELAQVICERLDGGGKVVRRLKAQHTGRLEEVVAPDLSGLRRPGTDVGREGPEAKEPEERPLPPPRLVLGKLRYCTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERLDHQKLEVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVLPGCMSTVVQCRKKGVKETLPVFGGDGCEPGGESQEAKEQRFDNKSDEDNERMSKRPKGAAEKMEHADGDGEDATAEALVAALEDELG
Sbjct:    1 MAKRRPRPTATSLNGTQGVGTCDNGNGGTRAYDTETLELDLEGQGLRPLTVSWGRRQGDRVKVGAELAQVICERLDGGGKVVRRLKAQHTGRLEEVVAPDLSGLRRPGTDVGREGPEAKEPEERPLPPPRLVLGKLRYCTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERLDHQKLEVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVLPGCMSTVVQCRKKGVKETLPVFGGDGCEPGGESQEAKEQRFDNKSDEDNERMSKRPKGAAEKMEHADGDGEDATAEALVAALEDELG 689          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|553196611|ref|XP_005856383.1| (rna polymerase ii ctd phosphatase, partial [Nannochloropsis gaditana CCMP526] >gi|422292668|gb|EKU19970.1| rna polymerase ii ctd phosphatase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0
Identity = 412/414 (99.52%), Postives = 412/414 (99.52%), Query Frame = 0
Query:    1 MAKRRPRPTATSLNGTQGVGTCDNGNGGTRAYDTETLELDLEGQGLRPLTVSWGRRQGDRVKVGAELAQVICERLDGGGKVVRRLKAQHTGRLEEVVAPDLSGLRRPGTDVGREGPEAKEPEERPLPPPRLVLGKLRYCTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERLDHQKLEVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTP 414
            MAKRRPRPTATSLNGTQGVGTCDNGNGGTRAYDTETLELDLEGQGLRPLTVSWGRRQGDRVKVGAELAQVICERLDGGGKVVRRLKAQHTGRLEEVVAPDLSGLRRPGTD GREGPEAKEPEERPLPPPRLVLGKLRYCTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLR ARKLNLILDIDLTLLHATIDPRAERLDHQKLEVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTP
Sbjct:    6 MAKRRPRPTATSLNGTQGVGTCDNGNGGTRAYDTETLELDLEGQGLRPLTVSWGRRQGDRVKVGAELAQVICERLDGGGKVVRRLKAQHTGRLEEVVAPDLSGLRRPGTDTGREGPEAKEPEERPLPPPRLVLGKLRYCTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRRARKLNLILDIDLTLLHATIDPRAERLDHQKLEVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTP 419          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|19115680|ref|NP_594768.1| (CTD phosphatase Fcp1 [Schizosaccharomyces pombe 972h-] >gi|26393804|sp|Q9P376.1|FCP1_SCHPO RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase; AltName: Full=CTD phosphatase fcp1 >gi|9588462|emb|CAC00553.1| CTD phosphatase Fcp1 [Schizosaccharomyces pombe])

HSP 1 Score: 187.193 bits (474), Expect = 8.384e-47
Identity = 144/497 (28.97%), Postives = 231/497 (46.48%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLSE----GTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAE-------RLDHQKL-EVHAFDIFN--QGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNR--VAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTPPVP-PTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDEL----------------SLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVL 602
            CTH V   G +CA+CG+ ++     G      A          ++VS  EA+ L     ++LR  ++L+LI+D+D T++HAT+DP           +++  L +V +F++     G    ++   RP L  FL +   LY L IYT G + YA +VA+++DP   LF+DR++SRDD   L  QKSL+RLFP    M +++DD   VW  + + +L+ V+P++F+    ++N   +A   P P      IP   P   P S       +   P      E D+      + +  +P  T+  D     +     +  E V AL   +  +P  +Q +      ++E+ G  + +  L                 + A    E  +     G     NV   +  ++++VL G  +LFSGV+P  VD   SD+   A+S GA +V DFS   THL+A    TEKV +A   G + +V   WL  S     R  E+ ++L
Sbjct:   99 CTHEV-NYGGLCAICGKNITSQDYMGYSDMARANISMTHNTGDLTVSLEEASRLESENVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL-AQKSLRRLFPCDTSMVVVIDDRGDVW--DWNPNLIKVVPYEFFVGIGDINSNFLAKSTPLPE-QEQLIPLEIPKDEPDSVDEINEENEETP------EYDSSNSSYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALELQKSERPLAKQQNA-----LLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 579          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|115396432|ref|XP_001213855.1| (conserved hypothetical protein [Aspergillus terreus NIH2624] >gi|114193424|gb|EAU35124.1| conserved hypothetical protein [Aspergillus terreus NIH2624])

HSP 1 Score: 184.882 bits (468), Expect = 1.215e-45
Identity = 156/533 (29.27%), Postives = 230/533 (43.15%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLSEGTGQAQEATRV-----FVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRA-------ERLDHQKL-EVHAFDIFNQGRILR---HWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVN--------RVAGLAPAPVLGSSAI---PPSRPLSPPPSSPPTTTHSSPAPSGVS---------------------------------GKETDAEAGRKGEKTPPVPPTVFGDPR--------EDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVLP 603
            C H V Q G +CA CG+ ++E T   +    +      V     ++VS  EA  +     ++L   RKL+L++D+D T++HAT+DP         E  +HQ L +V AF + + G  +R   ++  LRP L TFL     L+ L IYT G R YA  +A ++DPDR LF DRI+SRD+   L   K+L RLFP   +M +I+DD   VW+   S +L+ V P+ F+    ++N         +  ++ A    S A    PP RP++      P     S     V+                                  KE DAE   +GE +           +         D +L      LE VH  ++    K  T       GG +   RG  + +             +E D D  + P  +V   +  ++R+VL GV ++FSGVLP   D + +D+   A S GA I +  +   THLVA    T KV  A R   + IV   WL  S        E  ++LP
Sbjct:   93 CAHEV-QFGGLCAECGKDMTEATYNTETTDSMRAPIQMVHDNTALTVSEKEATRVEEDAKRRLLSNRKLSLVVDLDQTIIHATVDPTVGEWMEDKENPNHQALSDVRAFQLVDDGPGMRGCWYYVKLRPGLETFLENVAELFELHIYTMGTRAYAQHIASIIDPDRKLFGDRILSRDESGSLTA-KNLHRLFPVDTKMVVIIDDRGDVWRW--SPNLIKVSPYDFFVGIGDINSSFLPKKQELGAVSTADKTASKAAKGQPPERPVNGSTEEGPEQAEVSTLEQLVTMGGGDNPRLLQEQSDAQEETIMHQVEDRPLLQKQKELDAEDEAEGEDSAASEDESQDHNKHRHHLLEDNDRELFVLEERLEQVHRQFFEEYDKKRT----LALGGRVAALRGEKTPS-------------KEKDVDLKLVP--DVKDIMPYIKRKVLGGVVLVFSGVLPLGTDTQNADISLWAKSFGAVISQKINMKTTHLVAGRNRTAKVREATRYPNIKIVTTQWLLDSLTQWKHLSEDPYLLP 602          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|1069955267|ref|XP_018290200.1| (hypothetical protein PHYBLDRAFT_71251 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026587599|gb|OAD72160.1| hypothetical protein PHYBLDRAFT_71251 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 177.178 bits (448), Expect = 5.116e-44
Identity = 147/482 (30.50%), Postives = 223/482 (46.27%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLSEGTGQAQEATRVFVQGGYHV---SVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRA-ERLDHQKLEVHAF--DIFN---QGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKET--------DAEAGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGG-MWIVARTWLQLSFFHCDRKDEAGHVL 602
            C H V  +G +CA+CG +L     ++ E T   +   + +   +VSR EA  L +  A++LR  +KL+LILD+D T++HAT DP   E +D +K   H+   DI      G  L ++  LRP L  FL +   LY L IYT G R YA  VAR +DP  T+F +RI+SRD+   +  QK+LQRLFP    M ++LDD   VW    S +L+ + P++F+    ++N   G  P     +   P + P  P P  PPT    +     +  ++T          E   + E+     P +  D RE   L    ++L  VH+ YY                                          + AD         +V   + S++ ++L G+ ++FSGV+P + +P +S L  +A+S GA    + +  VTHL+A    T KV  A + G  + IV   WL  S      +DEA + L
Sbjct:    3 CKHEVQFNG-LCAICGAIL-----ESSEITEAGINMSHDLKGLTVSRKEAERLEKETAERLRKDKKLSLILDLDQTIVHATWDPTVGEWMDDEKNANHSATEDIRKFTLAGSPLVYYIKLRPGLSEFLEKVSQLYELHIYTMGTRHYAEAVAREIDPRGTMFRERILSRDESGSV-TQKTLQRLFPCDTSMVVVLDDRSDVWSF--SPNLIKIKPYEFFVGTGDINSPFG--PKQTEKTEE-PKADPEVPKPDDPPTLAAQTREQEAMVEEQTQQRPLAQKQTELNARQER-----PLLVDDDRE---LYTMLKILSEVHSRYY------------------------------------------KAADSQTSNTTAPDVKEIIPSMKSRILKGLHLVFSGVIPLHQEPSQSWLWQLAISFGANCELELTGKVTHLIAAKPGTSKVKAALKYGKRISIVTPAWLVDSTSRWAIQDEALYGL 422          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|215794710|pdb|3EF1|A (Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd Phosphatase)

HSP 1 Score: 169.859 bits (429), Expect = 1.412e-42
Identity = 137/449 (30.51%), Postives = 215/449 (47.88%), Query Frame = 0
Query:  178 VSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAE-------RLDHQKL-EVHAFDIFN--QGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNR--VAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAE-AGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQ--------GDGGAGGSIIEERGPASGNDELSLK---AGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVL 602
            ++VS  EA+ L     ++LR  ++L+LI+ +D T++HAT+DP           +++  L +V +F++     G    ++   RP L  FL +   LY L IYT G + YA +VA+++DP   LF+DR++SRDD   L  QKSL+RLFP    M +++DD   VW  + + +L+ V+P++F+    ++N   +A   P P      IP   P   P S       +   P   S   + A+ +    EKT  +    F   RE  + ++     E V AL   +  +P  +Q        G      +++  R       E  LK   A    E  +     G     NV   +  ++++VL G  +LFSGV+P  VD   SD+   A+S GA +V DFS   THL+A    TEKV +A   G + +V   WL  S     R  E+ ++L
Sbjct:    3 LTVSLEEASRLESENVKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL-AQKSLRRLFPCDTSMVVVIDDRGDVW--DWNPNLIKVVPYEFFVGIGDINSNFLAKSTPLPE-QEQLIPLEIPKDEPDSVDEINEENEETPEYDSSNSSYAQDSSTIPEKT--LLKDTFLQNREALEEQNK----ERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 441          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|1102182732|ref|XP_019027534.1| (hypothetical protein SAICODRAFT_28586 [Saitoella complicata NRRL Y-17804] >gi|1063233301|gb|ODQ56421.1| hypothetical protein SAICODRAFT_28586 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 172.17 bits (435), Expect = 2.122e-41
Identity = 151/530 (28.49%), Postives = 245/530 (46.23%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLS----EGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERL-------DHQKL-EVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQ--GEQSRHLLP----VLPFKFYTEFEEVNR--------VAGLAPAPVLG-----SSAIPP------------SRPLSPPPSS--PPTTTHSSPAPSG------VSGKETDAEAG-------RKGEKTPPV--PPTVFGDPR------EDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVL 602
            C+H +  +G +CA+CG+ ++     G   +  AT         ++VSR EAA + ++   +L  A+KL+LI+D+DLT++ A +DP   R        +H  + +V  F + ++ +   ++   RP L+ FL +   L+ + +YT G R YA+ V +++DPDR +F DRI+SRD+   L  +KS+QRLFP    + +I+DD   VWQ  G     L P    V PF F+ E  ++N            + PAPV       S+A P               P +PP S+   P+ T    A SG      ++ +ET   A        R  EK      P    GD R       D +L+    +L+ VH+ +Y                   + ERG A    E  L    + +G E      +   +++   L +++++VL G  I+FS ++P       S +  MA+  GA++ ++    VTH++A    T KV  A ++  + IV+R W   S     R+DE  +VL
Sbjct:   45 CSHAIQFAG-LCAMCGKDVTGLDFTGNTDSARATINMAHNTTGLTVSREEAARIEKAATSRLLEAKKLSLIVDLDLTVIQAAVDPTVGRWIADPTDPNHGLVKDVGVFQLASEPQT-NYYIKQRPLLKDFLEKMSNLFEMHVYTMGSRPYANAVTKIIDPDRKIFGDRILSRDENGTLQ-RKSVQRLFPEDDSLVVIIDDRADVWQTAGPAGAVLCPNVVKVKPFDFFPEVGDINGAFVPRQYPTPKVEPAPVTAKVDAPSTATPAVNGPGSNVDTNMGEPTTPPDSNAGSPSLTDQMVAISGGDNPELIAAQETKQHAALLAQQEQRPLEKMQESMDPAGDAGDHRVRILRDNDRELQVIESILKEVHSRFYS------------------LYERGQADAEREQMLA---DMQGSELGRAAALPAVKDI---LPAMKQKVLKGCVIVFSSIIPLGEKVHGSYVARMAMEFGAQVQDEIDSRVTHVIAGKLHTVKVNTAAKRKHIKIVSRAWFDRSIEKFARQDETPYVL 547          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|953454589|ref|XP_014570847.1| (hypothetical protein L969DRAFT_44452 [Mixia osmundae IAM 14324] >gi|358057984|dbj|GAA96229.1| hypothetical protein E5Q_02893 [Mixia osmundae IAM 14324] >gi|658167510|gb|KEI42219.1| hypothetical protein L969DRAFT_44452 [Mixia osmundae IAM 14324])

HSP 1 Score: 169.088 bits (427), Expect = 1.707e-40
Identity = 144/494 (29.15%), Postives = 224/494 (45.34%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLS----EGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRA-------ERLDHQKL-EVHAFDIFNQ--GRILR------HWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTTTHSSPAPSGVSGKETDAEAGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGND---------ELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVLP 603
            CTH V   G +CA+CG+ L+     G      A    V     ++VS  EAA L  +   +LR A+KL+LI+D+D T++ AT+DP            +H  L +V  F +  Q    ++       ++  LRP L+ FL +   LY + +YT G R YA  V R++DPD T F  RI+SRD+   L  +KSL+RLFP    MA+I+DD   VW    S +L+ V PF+F+    ++N   G    P   S A P      P   +P     ++   S ++ +E DA   R  E       +   +   D  L      L+A  A    +G    ++        +  E +  A   D         +L LK   +   E++ +D  +  P        +++  VL G  I FS ++P   +P  +D+  +A   GA    D +   THLVA N  T KV +A+++  + +V   WL  S     R+ E  +++P
Sbjct:  137 CTHYVQLHG-LCAICGKDLTIPDFTGVSDTARANIRMVHDRVGLTVSEQEAARLEDASTTRLRKAKKLSLIVDLDQTIIQATVDPTVGDWMRDGTNPNHSALKDVCVFKLGTQEDKEVVADVDGCWYYLKLRPGLQAFLRKMADLYEMHVYTMGTRSYAMAVCRIIDPDGTYFSTRILSRDESGSL-TRKSLERLFPCDTSMAVIIDDRSDVWHW--SPNLVKVEPFEFFVGVGDIN---GAFLPPTDTSDAAPL-----PTAIAPQNLQQAANGASEITAEEQDALERRDLEAKAQKTASALKEQVADRPLAKKQLALDADIA----KGTSEHSDSAASSEASASPEIQNAAVLKDTDAELYRIEQLLLKVHTDFYAEQSSQDVKLIIP--------NIKESVLRGCKIAFSSMIPLGTNPEAADIWKLAKMFGAYCSSDVNSKTTHLVARNPGTVKVQQAQKRQDLHVVWSNWLVRSAALWQRQPEREYLMP 606          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|813205951|dbj|GAO52568.1| (hypothetical protein G7K_6641-t1 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 171.014 bits (432), Expect = 1.834e-40
Identity = 151/530 (28.49%), Postives = 245/530 (46.23%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLS----EGTGQAQEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERL-------DHQKL-EVHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQ--GEQSRHLLP----VLPFKFYTEFEEVNR--------VAGLAPAPVLG-----SSAIPP------------SRPLSPPPSS--PPTTTHSSPAPSG------VSGKETDAEAG-------RKGEKTPPV--PPTVFGDPR------EDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSLKAGKEGEGEEADEDQGVRPPQNVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENASTEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVL 602
            C+H +  +G +CA+CG+ ++     G   +  AT         ++VSR EAA + ++   +L  A+KL+LI+D+DLT++ A +DP   R        +H  + +V  F + ++ +   ++   RP L+ FL +   L+ + +YT G R YA+ V +++DPDR +F DRI+SRD+   L  +KS+QRLFP    + +I+DD   VWQ  G     L P    V PF F+ E  ++N            + PAPV       S+A P               P +PP S+   P+ T    A SG      ++ +ET   A        R  EK      P    GD R       D +L+    +L+ VH+ +Y                   + ERG A    E  L    + +G E      +   +++   L +++++VL G  I+FS ++P       S +  MA+  GA++ ++    VTH++A    T KV  A ++  + IV+R W   S     R+DE  +VL
Sbjct:  847 CSHAIQFAG-LCAMCGKDVTGLDFTGNTDSARATINMAHNTTGLTVSREEAARIEKAATSRLLEAKKLSLIVDLDLTVIQAAVDPTVGRWIADPTDPNHGLVKDVGVFQLASEPQT-NYYIKQRPLLKDFLEKMSNLFEMHVYTMGSRPYANAVTKIIDPDRKIFGDRILSRDENGTLQ-RKSVQRLFPEDDSLVVIIDDRADVWQTAGPAGAVLCPNVVKVKPFDFFPEVGDINGAFVPRQYPTPKVEPAPVTAKVDAPSTATPAVNGPGSNVDTNMGEPTTPPDSNAGSPSLTDQMVAISGGDNPELIAAQETKQHAALLAQQEQRPLEKMQESMDPAGDAGDHRVRILRDNDRELQVIESILKEVHSRFYS------------------LYERGQADAEREQMLA---DMQGSELGRAAALPAVKDI---LPAMKQKVLKGCVIVFSSIIPLGEKVHGSYVARMAMEFGAQVQDEIDSRVTHVIAGKLHTVKVNTAAKRKHIKIVSRAWFDRSIEKFARQDETPYVL 1349          
BLAST of EWM26621.1 vs. NCBI_GenBank
Match: gi|530461102|gb|EQB44291.1| (FCP1-like phosphatase [Colletotrichum gloeosporioides Cg-14])

HSP 1 Score: 167.933 bits (424), Expect = 6.941e-40
Identity = 142/526 (27.00%), Postives = 240/526 (45.63%), Query Frame = 0
Query:  139 CTHPVLQSGRMCAVCGEVLSEGTGQA-----QEATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRA-ERLD-------HQKLEVHAFDIFNQG------RILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDLHGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNRVAGLAPAPVLGSSAIPPSRPLSPPPSSPPTT-THSSPAP---------------SGVSGKETDAEAGRKGEKTPPVPPTVFGDPREDTQLEHTWRVLEAVHALYYPRGGKPDTEQGDGGAGGSIIEERGPASGNDELSL------------KAGKEGEGEEADEDQGVRPPQ-------------NVAGCLSSVRRQVLAGVTILFSGVLPRNVDPRRSDLGYMALSLGARIVEDFSPTVTHLVAENA--STEKVFRARRQGGMWIVARTWLQLSFFHCDRKDEAGHVL 602
            C+H +   G +CA+CG+ ++E    +     Q AT         + VS   AA       ++L   RKL+L++D+D T++HA I+P   E ++       +   +V  F + ++G          ++  +RP L+ FL +   LY L +YT G R YA  +A+++DPDR LF +R++SRD+   +   KSLQRLFP    M +I+DD   VW   +  +L+ V+P+ F+    ++N            SS +P  + + P P+ P    T  +PAP               S  SG++   +A +  ++   +   +     +D  L H    L+           +  T++ + G    I++ R     +D+  L            +  KE + + A   Q   PP+             +V   L +++   L G TI+ SG++P  VD  +S++G  A+S GA+I    SP VTHLV   +   T+KV +A R   + IV++ WL        R DE  +++
Sbjct:   96 CSHEIQFQG-LCAICGKDMTEVNWASDQRDTQRATINMTHDQTGLMVSGDLAARAEHDTQKRLLRQRKLSLVVDLDQTIIHACIEPTVGEWMEDPTNPNYNAVKDVKKFQLNDEGPRGVVTSGCWYYIKMRPGLKEFLEKISELYELHVYTMGTRAYAMNIAQIVDPDRKLFGNRVISRDENGSMIS-KSLQRLFPVNTNMVVIIDDRADVWPRNRP-NLIKVVPYDFFRGIGDIN------------SSFLPKRQDILPAPADPEVKPTPIAPAPEVKTNGKVSAIDELVSMSSGEDKALQAAQTEQQEKSLEQQI-----KDRPLLHMQEQLDK-----ESEEKEKATQETEDGENIMIVQHRSQVLRDDDAELIYLQQHLTRLHERFYKEYDEKRAAAPQQSTPPKKKGEETVDLAAVPDVGYVLDTMKASTLEGTTIVLSGLVPLGVDVLQSEIGIQAMSFGAQIQTKVSPKVTHLVISTSRPRTQKVRQAARISSIKIVSQNWLSDCLSQWHRLDETPYLV 596          
The following BLAST results are available for this feature:
BLAST of EWM26621.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108709|gb|EWM26621.1|0.000e+0100.00rna polymerase ii ctd phosphatase [Nannochloropsis... [more]
gi|553196611|ref|XP_005856383.1|0.000e+099.52rna polymerase ii ctd phosphatase, partial [Nannoc... [more]
gi|19115680|ref|NP_594768.1|8.384e-4728.97CTD phosphatase Fcp1 [Schizosaccharomyces pombe 97... [more]
gi|115396432|ref|XP_001213855.1|1.215e-4529.27conserved hypothetical protein [Aspergillus terreu... [more]
gi|1069955267|ref|XP_018290200.1|5.116e-4430.50hypothetical protein PHYBLDRAFT_71251 [Phycomyces ... [more]
gi|215794710|pdb|3EF1|A1.412e-4230.51Chain A, The Structure Of Fcp1, An Essential Rna P... [more]
gi|1102182732|ref|XP_019027534.1|2.122e-4128.49hypothetical protein SAICODRAFT_28586 [Saitoella c... [more]
gi|953454589|ref|XP_014570847.1|1.707e-4029.15hypothetical protein L969DRAFT_44452 [Mixia osmund... [more]
gi|813205951|dbj|GAO52568.1|1.834e-4028.49hypothetical protein G7K_6641-t1 [Saitoella compli... [more]
gi|530461102|gb|EQB44291.1|6.941e-4027.00FCP1-like phosphatase [Colletotrichum gloeosporioi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4087rna4087Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications