EWM26710.1, cds4073 (CDS) Nannochloropsis gaditana

Overview
NameEWM26710.1
Unique Namecds4073
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:813509..814351 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26710.1
Productankyrin domain protein
Orig transcript idgnl|cribi|Naga_100001g29.8221.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:813509..814351 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|585108798|gb|EWM26710.1| (ankyrin domain protein [Nannochloropsis gaditana])

HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query:    1 MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKGIQDASEKKVGENPFNSFVLAETNCREKEQGLFQFRSESLGTRSTESVLSWEDDNAGGSEAPSLEEEDEASTLLSRAQVLSDWGKRETPFWKRGLST 280
            MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKGIQDASEKKVGENPFNSFVLAETNCREKEQGLFQFRSESLGTRSTESVLSWEDDNAGGSEAPSLEEEDEASTLLSRAQVLSDWGKRETPFWKRGLST
Sbjct:    1 MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKGIQDASEKKVGENPFNSFVLAETNCREKEQGLFQFRSESLGTRSTESVLSWEDDNAGGSEAPSLEEEDEASTLLSRAQVLSDWGKRETPFWKRGLST 280          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|553179627|ref|XP_005852732.1| (receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526] >gi|553196604|ref|XP_005856381.1| receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526] >gi|422292666|gb|EKU19968.1| receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526] >gi|422295800|gb|EKU23099.1| receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0
Identity = 275/280 (98.21%), Postives = 276/280 (98.57%), Query Frame = 0
Query:    1 MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKGIQDASEKKVGENPFNSFVLAETNCREKEQGLFQFRSESLGTRSTESVLSWEDDNAGGSEAPSLEEEDEASTLLSRAQVLSDWGKRETPFWKRGLST 280
            MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHG PLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTK  QDASEKKVGENPFNSFVLAETNCREKEQGLFQFRSESLGTRSTESVLSWED+NAGGSEAPSLEEEDEASTLLSRAQVLS WGKRETPFWKRGLST
Sbjct:   25 MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGQPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKSTQDASEKKVGENPFNSFVLAETNCREKEQGLFQFRSESLGTRSTESVLSWEDENAGGSEAPSLEEEDEASTLLSRAQVLSAWGKRETPFWKRGLST 304          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|1094495584|emb|SEM99390.1| (Ankyrin repeat-containing protein [Lihuaxuella thermophila])

HSP 1 Score: 71.633 bits (174), Expect = 2.628e-11
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    7 DAVTAGSVHKVSCLLRAHPLLVSTRMHE---GGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDV 145
            +AV AG V KV+  L+ HP     RM+E    GWTPL LAS++   E+V  +L + G  V  + ++      LH   A G   + L ++K HGA V+       TPLH A      + V  LL  GADP   T+EG    D+
Sbjct:   66 EAVIAGEVEKVAVFLQQHP----ERMNEMSRDGWTPLHLASFFGHVELVRFLLKK-GADVRAISRNQMANQPLHAAIAGGVEEVALLLLK-HGARVNTPQHLGYTPLHVAVLTGSTVLVKRLLEWGADPSVHTDEGKTALDL 201          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|1005948797|ref|XP_015782713.1| (PREDICTED: tankyrase-2-like [Tetranychus urticae] >gi|1005948799|ref|XP_015782714.1| PREDICTED: tankyrase-2-like [Tetranychus urticae])

HSP 1 Score: 72.0182 bits (175), Expect = 1.855e-10
Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 0
Query:    7 DAVTAGSVHKVSCLLRAHPLLVSTRMHEGGW-TPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESG 149
            +A  AG    V  +L + P LV+ R  +G   TPL LA+ Y++ ++V+L+L R   G D   +D      LH   ++GH  +   +VK+  A++D+ D  + TPLH A    +   V +LL  GADP  +  +G +PSD+ + G
Sbjct:  495 EAAKAGDCDTVKTILNSFPHLVNVRDSDGRQSTPLHLAAGYNRVDIVDLLLKR---GADVHAKDKGGLVPLHNACSYGHYEVAELLVKK-SANIDVTDLWKFTPLHEAAAKGKYDIVRLLLRHGADPSKKNRDGHMPSDLVKDG 634          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|154416421|ref|XP_001581233.1| (ankyrin repeat protein [Trichomonas vaginalis G3] >gi|121915458|gb|EAY20247.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3])

HSP 1 Score: 71.2478 bits (173), Expect = 2.341e-10
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   22 RAHPLLVSTRMHEGG---------WTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLR 164
            R H  +VS  + +G          WTPL+ +SY    +VV L+ +    G D   +D   R++LH+ A +G+  +I  ++ + G  VD RD  + TPL  A   N+A  VA LL +GADP+A  E+G    ++     TR+ +R +    +R
Sbjct:  336 RGHADVVSILIKKGANVNSKALNLWTPLMHSSYGGYKDVVILLTDN---GADVTFKDPIGRSALHFAANNGNVDIIRHLIDK-GLDVDQRDCGEKTPLMYAALENKAEAVAFLLEMGADPIAIDEKGLTAYEMARLEPTRAVLRPYMKELIR 483          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|1044579323|ref|XP_017426513.1| (PREDICTED: ankyrin-3 [Vigna angularis] >gi|965614116|dbj|BAT99748.1| hypothetical protein VIGAN_10126000 [Vigna angularis var. angularis])

HSP 1 Score: 68.9366 bits (167), Expect = 4.750e-10
Identity = 59/211 (27.96%), Postives = 102/211 (48.34%), Query Frame = 0
Query:    5 LNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVE-LILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKGIQDASEKKVGENPFNSFVLAETNCREKEQG 214
            L+ A  +G +  V  +L ++PL V++R  +   TPL LA++  Q EVV  L  ++A  G   +D       ++H+ +  GH L +++ +   GAS+     +  T LH A + +    V  L   GA+  A+T+ G  P D+  +G  RS +  ++ S       K+ + +    D  T  ++  SE  +   P N+ +  E N REK +G
Sbjct:   13 LHSAARSGDLIAVQSILASNPLAVNSR-DKHSRTPLHLAAFSGQAEVVTYLCKHKADAGASAMDD----MAAIHFASQKGH-LEVVRALLSAGASLKASTRKGMTSLHYAVQGSHLELVKYLAKKGANLAAQTKAGKTPLDLANNGEIRSFLEEFEKSAKNGELGKKDKDKAEEFDPNTSELELESEGDLNAEPPNAALDEEKNAREKRKG 217          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|313217564|emb|CBY38634.1| (unnamed protein product [Oikopleura dioica] >gi|313231988|emb|CBY09100.1| unnamed protein product [Oikopleura dioica])

HSP 1 Score: 70.4774 bits (171), Expect = 5.129e-10
Identity = 57/160 (35.62%), Postives = 84/160 (52.50%), Query Frame = 0
Query:    4 ALNDAVTAGSVHKVSCLLRAHPLLVSTR-MHEGGWTPLLLASYYDQPEVVE-LILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMR--LWQ 159
            A+ DA  +GSV ++  LL   P  V+ R +H    TPL LA+ Y+  E+ E LI N A V  +D    I     LH  A++GH + I +++ +HG+ V+  D  Q TPLH A +  +    A+LL  GADP  + +EG    +V      R  +R  +WQ
Sbjct:  691 AVLDAAKSGSVARIQKLLT--PENVNCRDVHGRNSTPLHLAAGYNNIEIAETLIENGADVNAEDRGGLI----PLHNAASYGH-VEIAQVLLKHGSHVNANDRWQFTPLHEAAQKGRTQLCALLLSHGADPYVKNQEGQTTIEVATQDDVRCLLRDAMWQ 843          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|920702192|gb|KOM45417.1| (hypothetical protein LR48_Vigan06g072300 [Vigna angularis])

HSP 1 Score: 69.3218 bits (168), Expect = 5.738e-10
Identity = 59/211 (27.96%), Postives = 102/211 (48.34%), Query Frame = 0
Query:    5 LNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVE-LILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKGIQDASEKKVGENPFNSFVLAETNCREKEQG 214
            L+ A  +G +  V  +L ++PL V++R  +   TPL LA++  Q EVV  L  ++A  G   +D       ++H+ +  GH L +++ +   GAS+     +  T LH A + +    V  L   GA+  A+T+ G  P D+  +G  RS +  ++ S       K+ + +    D  T  ++  SE  +   P N+ +  E N REK +G
Sbjct:   89 LHSAARSGDLIAVQSILASNPLAVNSR-DKHSRTPLHLAAFSGQAEVVTYLCKHKADAGASAMDD----MAAIHFASQKGH-LEVVRALLSAGASLKASTRKGMTSLHYAVQGSHLELVKYLAKKGANLAAQTKAGKTPLDLANNGEIRSFLEEFEKSAKNGELGKKDKDKAEEFDPNTSELELESEGDLNAEPPNAALDEEKNAREKRKG 293          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|1059398714|ref|XP_017772298.1| (PREDICTED: tankyrase [Nicrophorus vespilloides])

HSP 1 Score: 69.3218 bits (168), Expect = 1.205e-9
Identity = 50/146 (34.25%), Postives = 77/146 (52.74%), Query Frame = 0
Query:    5 LNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGW-TPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESG 149
            L DA  +G + +V  LL + P +V+ R  +G   TPL  AS Y++  VVE +L    +G D   +D      LH   ++GH   + +++ +HGASV++ D  + TPLH A    +   V +LL  GADP  +  +G  P D+   G
Sbjct:  493 LLDAAKSGDLEQVQRLLGSFPHIVNCRDLDGRHSTPLHFASGYNRVSVVEYLLQ---LGADVHAKDKGGLVPLHNACSYGH-YEVTELLVKHGASVNVADLWKFTPLHEAAAKGKYEIVKLLLKHGADPGKKNRDGATPLDLVRDG 634          
BLAST of EWM26710.1 vs. NCBI_GenBank
Match: gi|1212215295|pdb|5GIK|A (Chain A, Modulation Of The Affinity Of A Hiv-1 Capsid-directed Ankyrin Towards Its Viral Target Through Critical Amino Acid Editing)

HSP 1 Score: 65.4698 bits (158), Expect = 1.272e-9
Identity = 56/144 (38.89%), Postives = 74/144 (51.39%), Query Frame = 0
Query:    3 KALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVT 146
            K L +A  AG   +V  LL  H   V+ R + G  TPL LA+YY   E+V L+L     G D   +D    T LH+ A  GH L I++++ +HGA V+ RDA   TPLH A K      V +LL  GAD  A    G    D++
Sbjct:    4 KKLLEAARAGQDDEVRLLLE-HGADVNARDYIGS-TPLHLAAYYGHLEIVRLLLEH---GADVNARDSTGTTPLHYAARLGH-LEIVRLLLEHGADVNARDAMGWTPLHLAAKKGHLEIVRLLLKHGADVNANDHFGKTAFDIS 141          
The following BLAST results are available for this feature:
BLAST of EWM26710.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108798|gb|EWM26710.1|0.000e+0100.00ankyrin domain protein [Nannochloropsis gaditana][more]
gi|553179627|ref|XP_005852732.1|0.000e+098.21receptor-interacting serine-threonine kinase 4, pa... [more]
gi|1094495584|emb|SEM99390.1|2.628e-1136.62Ankyrin repeat-containing protein [Lihuaxuella the... [more]
gi|1005948797|ref|XP_015782713.1|1.855e-1034.03PREDICTED: tankyrase-2-like [Tetranychus urticae] ... [more]
gi|154416421|ref|XP_001581233.1|2.341e-1032.24ankyrin repeat protein [Trichomonas vaginalis G3] ... [more]
gi|1044579323|ref|XP_017426513.1|4.750e-1027.96PREDICTED: ankyrin-3 [Vigna angularis] >gi|9656141... [more]
gi|313217564|emb|CBY38634.1|5.129e-1035.63unnamed protein product [Oikopleura dioica] >gi|31... [more]
gi|920702192|gb|KOM45417.1|5.738e-1027.96hypothetical protein LR48_Vigan06g072300 [Vigna an... [more]
gi|1059398714|ref|XP_017772298.1|1.205e-934.25PREDICTED: tankyrase [Nicrophorus vespilloides][more]
gi|1212215295|pdb|5GIK|A1.272e-938.89Chain A, Modulation Of The Affinity Of A Hiv-1 Cap... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4083rna4083Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications