EWM30270.1, cds407 (CDS) Nannochloropsis gaditana

Overview
NameEWM30270.1
Unique Namecds407
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1011418..1011647 -
Alignment locationCM002455.1:1009531..1011286 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30270.1
Producte3 ubiquitin-protein ligase rnf14
Orig transcript idgnl|cribi|Naga_100003g78.1787.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1011418..1011647 -
CM002455.1supercontigCM002455.1:1009531..1011286 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016567protein ubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR031127E3_UB_ligase_RBR
IPR002867Znf_C6HC
Homology
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|585112929|gb|EWM30270.1| (e3 ubiquitin-protein ligase rnf14 [Nannochloropsis gaditana])

HSP 1 Score: 1378.62 bits (3567), Expect = 0.000e+0
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0
Query:    1 MESSEGLRLEHTEAHSKSNSRQSSVGLRTFSFRDPPALMPCGSVSSSSHIMTNSSAALPYCGDLDAARKARDSPAVRLLTQYRDQQRSADSSPLSLSRNSSAGNPMDGQAPPPAASSFSSLTRRLLELGFKATMRGKRNQKSSDASDAERQNEALAGPLQAAAEQSHSVSRHQPQFDLNTEKGAARAVSGAGETGSPVVRLNQSHHSSSGRGMLCQTLYEAAGGVTGEGKQESDNWPPSYYLRGGETSKRLPTTFIDKSNTGQTIVPAAAAAIGACAVYKDSPQHMVEEEMLEDLVLMTCVPTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDGTGGNGHA 661
            MESSEGLRLEHTEAHSKSNSRQSSVGLRTFSFRDPPALMPCGSVSSSSHIMTNSSAALPYCGDLDAARKARDSPAVRLLTQYRDQQRSADSSPLSLSRNSSAGNPMDGQAPPPAASSFSSLTRRLLELGFKATMRGKRNQKSSDASDAERQNEALAGPLQAAAEQSHSVSRHQPQFDLNTEKGAARAVSGAGETGSPVVRLNQSHHSSSGRGMLCQTLYEAAGGVTGEGKQESDNWPPSYYLRGGETSKRLPTTFIDKSNTGQTIVPAAAAAIGACAVYKDSPQHMVEEEMLEDLVLMTCVPTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDGTGGNGHA
Sbjct:    1 MESSEGLRLEHTEAHSKSNSRQSSVGLRTFSFRDPPALMPCGSVSSSSHIMTNSSAALPYCGDLDAARKARDSPAVRLLTQYRDQQRSADSSPLSLSRNSSAGNPMDGQAPPPAASSFSSLTRRLLELGFKATMRGKRNQKSSDASDAERQNEALAGPLQAAAEQSHSVSRHQPQFDLNTEKGAARAVSGAGETGSPVVRLNQSHHSSSGRGMLCQTLYEAAGGVTGEGKQESDNWPPSYYLRGGETSKRLPTTFIDKSNTGQTIVPAAAAAIGACAVYKDSPQHMVEEEMLEDLVLMTCVPTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDGTGGNGHA 661          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|923133627|ref|XP_013760279.1| (hypothetical protein AMSG_02933 [Thecamonas trahens ATCC 50062] >gi|906553255|gb|KNC46498.1| hypothetical protein AMSG_02933 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 201.83 bits (512), Expect = 1.727e-52
Identity = 123/363 (33.88%), Postives = 168/363 (46.28%), Query Frame = 0
Query:  303 TSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYV-ADIGEKRSIVPFQEVPPAEIARVEHQIM---DGTPV--KCDVCSAKIMGPLAMCINCPSFSCCIRCQ------NKHTRGHVLRLYMD 653
             S  Y +DC  +H F  E +   ++  + ++    CP          CN+++++ EV           Q   +   L  FR                T+   R      G I CP   C+ +   + P EK+RV C  C   FCSLCK  YH++  C +V    + WLEW   GR  YL ++A  D+ Y+  +  F   R AH +EV  A Q       DE +KA+ C+ CP C RVI RV GC +MVCG+N HGG+ Q+GCG +F+W  A  YV A     R    F    P    R EH +    DGT V  +CD+C   I GP   CI CP+F+ C+RCQ          R HV  + MD
Sbjct:  324 VSQMYTVDCAASHRFCFECIGRMVEMNIRENTEAVCPGGE-------CNHVMSEIEV----------MQTVGEGELLTKFR----------------TQQLTRAITSIPGAIPCPTADCTGYEIASMPGEKERVTCSVCRAVFCSLCKNQYHYKYECGQVQQAERAWLEWVTSGRRAYLDQLAAADAEYEERISEFNEAREAHQREVEAALQRLRENENDEEWKAANCRCCPSCGRVINRVAGCSSMVCGRNYHGGDNQDGCGASFNWETAPAYVPATSSHIRVDTEFGTEAPEHSIRTEHILFAGTDGTAVRLRCDLCQQDIFGPEFRCIACPAFAVCLRCQPLAIDEGSPHRTHVFDIIMD 653          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|1046769207|gb|OCK77743.1| (hypothetical protein K432DRAFT_395346 [Lepidopterella palustris CBS 459.81])

HSP 1 Score: 176.792 bits (447), Expect = 2.731e-45
Identity = 106/356 (29.78%), Postives = 169/356 (47.47%), Query Frame = 0
Query:  304 SLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAK-IMGPLAMCINCPSFSCCIRCQNK---HTRGHVLRLYMDGT 655
            S +Y  DC  +H F  +     ++ +L  + IP CP        +RC + ++Q+E++ ++     P+ L   +  LL     RL   G   V                        +C + +      +++R +CPKC   FCSLC   YH+R +C E+      W EW + GR  Y     ++   Y+     + + +  H ++   A   +  L  DE YKA R +RCP+CNRV+ER++GCD M CGQ+ +GGN+Q+GCG+ F W +A  Y A+     +I  F    P + A   H+       +CD C    I+G    C+NCPSF  C +C++    H + HV R++ + T
Sbjct:  109 SESYIFDCISSHTFCLDCSRESVQGSLDGNSIPKCP-------GERCKHEISQQEIKQLV-----PTLLDKYNNLLL----KRLFAQGTFLVC-----------------------KCKHVMAAAYDGQQERCECPKCNYVFCSLCNEDYHYRSTCQELKQYRNIWTEWLRQGRRAYHQATQQKQQQYEKQTKEYMAAQKKHEEDRAAALLAFQTLQKDEQYKAQRARRCPNCNRVVERIEGCDAMTCGQDKYGGNVQSGCGREFRWANARPYAAETANMPNIEQFVAQAPQQAADFRHEF-----TRCDHCGVNDIVGLRFECLNCPSFDLCSKCEHNGIGHDQRHVFRIWRNNT 420          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|1046779175|gb|OCK87233.1| (hypothetical protein K441DRAFT_682755 [Cenococcum geophilum 1.58])

HSP 1 Score: 174.481 bits (441), Expect = 7.034e-45
Identity = 104/335 (31.04%), Postives = 159/335 (47.46%), Query Frame = 0
Query:  302 PTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCS-AKIMGPLAMCINCPSFSCC 635
            P S +Y  DC  +H F  +     ++  L  + IP CP        +RC++ ++Q+EV+ ++     P QL      LL     RL               F ++G            +C + +      +++R DCPKC   FCSLC   YH+R +C E++     W  W + GR  Y     ++   ++     + + +  H  +   A Q +  L  DE YKA R KRCPHC+RV+ER+ GCD M CGQ+ +GGN+Q+GCG+ F W  AL Y A+      I  F    P + A   H+      V+CD C  A+I+G    C++CP++  C
Sbjct:   79 PRSESYIFDCVSSHTFCLDCSRETVRGTLEGNGIPKCP-------GERCDHEISQQEVKQLV-----PEQLEKYSDLLL----KRL---------------FTQQGTFLVC-------KCRHVMAARYDGQQERCDCPKCHYVFCSLCNEDYHYRSTCQELVQYRNIWTAWLRQGRKAYHQTQNQQRKEHEKQTKEYIAAQKKHEDDRAAALQAFETLQRDEQYKAQRAKRCPHCSRVVERITGCDHMTCGQDKYGGNVQSGCGKGFSWGSALPYTAEAANTPKIDNFILQAPQQAADFRHEF-----VRCDNCGVAEIVGLRFECLHCPAYDLC 370          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|1046800834|gb|OCL07284.1| (hypothetical protein AOQ84DRAFT_377855 [Glonium stellatum])

HSP 1 Score: 167.548 bits (423), Expect = 1.972e-42
Identity = 101/325 (31.08%), Postives = 154/325 (47.38%), Query Frame = 0
Query:  302 PTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCS-AKIMGPLAM 625
            P S +Y  DC  +H F  +     ++  L  + +P CP        +RC++ ++Q+EV+ ++     P  L      LL     RL               F ++G      + C   +C + +      +++R DCPKC   FCSLC   YH+R +C E++     W  W + GR  Y     ++ + Y+     + +    H ++   A Q +  L  DE YKA R KRCPHC RV+ER+ GCD M CGQ+ +GGN+Q+GCG+ F W  AL Y A+      I  F    P + A   H++     V+CD C  A+I+G   M
Sbjct:   79 PRSESYIFDCISSHTFCMDCSRETVRGTLEGNGVPKCP-------GERCDHEISQQEVKQLV-----PELLEKYSDLLL----KRL---------------FAQQGTF----LVC---KCRHVMAARYDGQQERCDCPKCHYVFCSLCNEDYHYRSTCQELIQYRNIWTAWLRQGRKVYHQTQKQQQNEYEKQTKEYAAAHKKHEEDRAAALQAFETLQRDEQYKAQRAKRCPHCQRVVERITGCDHMTCGQDKYGGNVQSGCGKEFSWASALPYTAEAANTPKIDNFVLQAPKQAADFRHEL-----VRCDNCGVAEIIGLRGM 360          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|551571757|ref|XP_005771739.1| (hypothetical protein EMIHUDRAFT_118020 [Emiliania huxleyi CCMP1516] >gi|485623069|gb|EOD19310.1| hypothetical protein EMIHUDRAFT_118020 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 148.288 bits (373), Expect = 3.113e-34
Identity = 104/376 (27.66%), Postives = 162/376 (43.09%), Query Frame = 0
Query:  299 TCVPTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEK--QRVDCPK--CLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSS-YQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDW-----NDALLYVADI-------------------------GEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCP-SFSCCIRC 638
            +C  T+    L    AH    E  + C +++L + L+PACP  +     Q+C  +  ++ +  +     PPSQ                        + ++ E +L   +   G ++C    C  W  P  P     QR++C +  C   FCS C++P+H R +C E + ++ +W+ + Q   AP+L    R D   +  AL      + +     R A   +  L   E +K + CKRCPHC RV+E+++GCD +VCG +AHGGN Q GCG+ F W     N AL Y AD+                         G        +E      AR EHQ+  G  V+C  C   ++GP   C+ C      C++C
Sbjct:   10 SCFDTAPLSPLCASSAHGLCAECCWRCCESSLGEGLVPACPFKD-----QKCGAVSKRRALTALDAAQLPPSQRET--------------------FASKLDEVYLGAERARRGAVQCIGKGCEEWYVPPVPHSDRPQRLECSRRACGAVFCSACRQPFHVRSTCAEALRLSARWVRFLQDELAPFLQAAVRLDGERWSPALAAHAQAKGSLDDATRDALSRFDELRRMELWKQAHCKRCPHCRRVVEKMEGCDMLVCGSDAHGGNQQRGCGKPFVWCEGQPNSALKYEADLRGAADYAAEEDGGGGAAGGGGGGEGGGGGEGGALRERRLRRDAREEHQVRPGVAVRCSGCDDPVVGPRLQCVQCEVPVELCVKC 360          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|551590423|ref|XP_005779593.1| (hypothetical protein EMIHUDRAFT_205120 [Emiliania huxleyi CCMP1516] >gi|485632113|gb|EOD27164.1| hypothetical protein EMIHUDRAFT_205120 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 137.117 bits (344), Expect = 8.649e-32
Identity = 78/262 (29.77%), Postives = 125/262 (47.71%), Query Frame = 0
Query:  314 AHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEK--QRVDCPK--CLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSS-YQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDW 570
            AH    E  + C +++L + L+PACP  +     Q+C  +  ++ +  +     PPSQ                        + ++ E +L   +   G ++C    C  W  P  P     QR++C +  C   FCS C++P+H R +C E + ++ +W+ + Q   AP+L    R D   +  AL      + +     R A   +  L   E +K + CKRCPHC RV+E+++GCD +VCG +AHGGN Q GCG+ F W
Sbjct:   27 AHGLCAECCWRCCESSLGEGLVPACPFKD-----QKCGAVSKRRALTALDAAQLPPSQRET--------------------FASKLDEVYLGAERARRGAVQCIGKGCEEWYVPPVPHSDRPQRLECSRRACGAVFCSACRQPFHVRSTCAEALRLSARWVRFLQDELAPFLQAAVRLDGERWSPALAAHAQAKGSLDDATRDALSRFDELRRMELWKQAHCKRCPHCRRVVEKMEGCDMLVCGSDAHGGNQQRGCGKPFVW 263          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|298704877|emb|CBJ28394.1| (zinc finger family protein, putative [Ectocarpus siliculosus])

HSP 1 Score: 137.117 bits (344), Expect = 2.911e-31
Identity = 84/257 (32.68%), Postives = 125/257 (48.64%), Query Frame = 0
Query:  307 YRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHV--LNRHAPPS----------QLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKR-PYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMV 550
            + +DCK  H F  + L+   +  L+D LIPACPL+       +C + L Q+EVE V  L  ++  S           +  +DR+ L   R  L                 R+G  + G I C +  C  W+ P      QRV C  CL+ FC  CKR PYH+   CDEV+ ++++W  W   G+A +L  MA +D  ++A LD    ++  H + V+ A++        E +K  RC+ CPHC R IE++ GCD M 
Sbjct:   83 FTVDCKEQHTFCVDCLHHHCRVQLLDSLIPACPLST-----MKCGHELGQEEVERVFLLKSYSSASAGGKDGGDTTGVSEEDRRALDTCRNLLT----------------RRGLESTGAIPCVSPECGNWMVPEGG--GQRVKCASCLVEFCRRCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQDDQHRALLDRHNRKKEEHDRAVKEAQRVRLEYERMEEWKEQRCRCCPHCGRTIEKLSGCDMMA 316          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|955162042|emb|CUG93990.1| (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 67.0106 bits (162), Expect = 6.946e-8
Identity = 66/273 (24.18%), Postives = 109/273 (39.93%), Query Frame = 0
Query:  436 VDCPKCLMAFCSLCKRPYH-FRCSCDEVMTITKQWLEWQ---QHGRAPYLTKMAREDSSYQAA---------------------LDVFKSRRAAHVQEVRTAEQNWGLLVADENY-KASRCKRCPHCNRV-IERVDGCDTMVCGQNAH-GGNIQNGCGQAFDW------NDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGT---------------PVKCDVCSAKIMGPLAM-CINC-PSFSCCIRC-----QNKHTR----GHVL 648
            V CP+C   +CS C+  YH +  SC EV+    +W  +    ++     L     E S+++ A                     ++    ++   +Q+++ A  N      D  Y K    +RCPHC R  I R+ G D +VCG N H GGN Q GC + F++         +      GE+R +    E   +++  ++  + D +                + C  C  K++G   + C +C P F  C+ C      N H +    GHV 
Sbjct:  438 VTCPECSNKWCSQCRFAYHPYSRSCSEVLRAKLEWATYSDVLKNNANNALCDFDSEVSAFKLASTDRPAALARRRDRVTHEIRRIEACIVKKDEEIQQIQHANHNELNWDGDTGYPKVKGSRRCPHCGRQPIRRLAGSDVVVCGANMHGGGNFQGGCLRQFNYVSPEAAYQPMSTTRQEGERREL----EAALSKLVHLKKTLEDQSTTTSFPPPALADHWPTLSCSDCKKKLLGDFHVQCYHCEPPFLLCVHCVRSGKHNDHAKHGDAGHVF 706          
BLAST of EWM30270.1 vs. NCBI_GenBank
Match: gi|955165262|emb|CUG91332.1| (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 65.4698 bits (158), Expect = 2.552e-7
Identity = 70/279 (25.09%), Postives = 107/279 (38.35%), Query Frame = 0
Query:  427 PTRPLEKQRVDCPKCLMAFCSLCKRPYH-FRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADE--------------------------NYKASRCKRCPHCNRV-IERVDGCDTMVCGQNAH-GGNIQNGCGQAFDW------NDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPV--------KCDVCSAKIMGPL-AMCINC-PSFSCCIRCQNKHTRGHVLRLYMDGTGGNGH 660
            P  P     + CP C + +C+ CK   H    +C +V     QW  +  +        +   DS     + +  + RAA V+  RT  Q+    + +E                          + K    +RCPHC R  I RV  C  M+CG N+H GGN Q GC + FD+         +    +  EK ++V  +    A +  V+ QI    PV         C  C   ++G     C +C P +  C+ C     RG+    + D T  +GH
Sbjct:  553 PKTPGAPVGITCPSCSIRWCAQCKCAEHPHAANCGDVTNAKHQWPVYSDNMTRFANVVLGDLDSEVMV-VKLALTDRAAAVERRRTFLQSQIARINEEIADLDHAIQQRHQMNAFEMTWDGDGGDPKVIGSRRCPHCGRQPIRRVQFCQYMICGMNSHGGGNFQGGCMKPFDYCSPEAAYQPISTAGEEAEKANLVSKRNELTAHLEGVDQQIDFPPPVLADHWPALSCSQCKKGLLGDFHVQCYHCEPPYLLCVYC----IRGNKHNEHADPTRESGH 826          
The following BLAST results are available for this feature:
BLAST of EWM30270.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112929|gb|EWM30270.1|0.000e+0100.00e3 ubiquitin-protein ligase rnf14 [Nannochloropsis... [more]
gi|923133627|ref|XP_013760279.1|1.727e-5233.88hypothetical protein AMSG_02933 [Thecamonas trahen... [more]
gi|1046769207|gb|OCK77743.1|2.731e-4529.78hypothetical protein K432DRAFT_395346 [Lepidoptere... [more]
gi|1046779175|gb|OCK87233.1|7.034e-4531.04hypothetical protein K441DRAFT_682755 [Cenococcum ... [more]
gi|1046800834|gb|OCL07284.1|1.972e-4231.08hypothetical protein AOQ84DRAFT_377855 [Glonium st... [more]
gi|551571757|ref|XP_005771739.1|3.113e-3427.66hypothetical protein EMIHUDRAFT_118020 [Emiliania ... [more]
gi|551590423|ref|XP_005779593.1|8.649e-3229.77hypothetical protein EMIHUDRAFT_205120 [Emiliania ... [more]
gi|298704877|emb|CBJ28394.1|2.911e-3132.68zinc finger family protein, putative [Ectocarpus s... [more]
gi|955162042|emb|CUG93990.1|6.946e-824.18Hypothetical protein, putative [Bodo saltans][more]
gi|955165262|emb|CUG91332.1|2.552e-725.09Hypothetical protein, putative [Bodo saltans][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna407rna407Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications