EWM26756.1, cds4068 (CDS) Nannochloropsis gaditana

Overview
NameEWM26756.1
Unique Namecds4068
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:803015..804889 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26756.1
ProductRFT1 family lipid transporter
Orig transcript idgnl|cribi|Naga_100001g34.8267.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:803015..804889 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005319lipid transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006869lipid transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR007594RFT1
Homology
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|585108844|gb|EWM26756.1| (RFT1 family lipid transporter [Nannochloropsis gaditana])

HSP 1 Score: 1253.04 bits (3241), Expect = 0.000e+0
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0
Query:    1 MVLQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTCEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRRLATGRREEAGSKAKSGLEGKKGA 624
            MVLQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTCEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRRLATGRREEAGSKAKSGLEGKKGA
Sbjct:    1 MVLQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTCEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRRLATGRREEAGSKAKSGLEGKKGA 624          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|661175158|emb|CDH61521.1| (oligosaccharide translocation protein rft1 [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 242.662 bits (618), Expect = 1.169e-68
Identity = 192/612 (31.37%), Postives = 300/612 (49.02%), Query Frame = 0
Query:    5 RGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTL--GRTTLVGLSSDTCEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITF-VLLVWVLPPEKA--LLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVF--AGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRRLATGRREE 609
            R + F L+Q++LR+      G+ASV L+LLL+T LF+SREGFR  L  G +   G      E ++  NL+++P  LG + +LL+  +  S  ++    K       R + +LF  AA  E L EP +++    L  +LR + EG+A L+R  ITF + L+       A  +LAF  AQ+ + ++++  Y+ +                  +   M T++       P RL A         S+  + + + + L LA  LT QS  KH+LT+GDK+++S   S   QG+YA   NYGSL  R+LFQPLEE+ R +F++L + NG            +K K   +T                  AS  +L  L G      IL+GL+F CF  NYT  L+ LL+ G+ W        + +  VLS YC+YV  + VNG+TE FV AVAT++D+ RL        A F  AG  F  +   G +GLVLAN   + +RI +S +++  YF G +                   + +    FP  + +A+F+ A+  T  S++ +V  + ++    H+  GG+    V G  +W E+ +  D+K   +LA  R++E
Sbjct:   45 RMLTFGLHQIVLRYTTAETLGIASVKLELLLSTILFISREGFRCALLRGGSEDSGKGRSDNEEQKVTNLAYIPTALGLITTLLACGYYLSTIDDATSLK---YPYYRTSVILFGAAAFAELLVEPLFILAMNRLYFSLRVSVEGVAVLVRCFITFGMTLLGATSSHNAYGVLAFAVAQMAFGLIMMFGYFAFFF-------------KKVRSQQMKTSAL-----FPHRLKA---------SNGRSYYFDKTMLNLASTLTKQSLLKHVLTEGDKMLISAICSDNDQGIYAFVVNYGSLIVRILFQPLEETTRTLFSKLLS-NG------------EKNKSNMQT------------------ASNVLLMTLRGH-----ILLGLLFTCFATNYTATLIDLLV-GKEWSV-----HQNAPAVLSVYCMYVPIMGVNGVTEGFVQAVATKKDLSRLSYYMIGFSACFMAAGYFFMHVLDLGAIGLVLANMVNLSIRIAYSWNYISYYFGGTIP------------------QLRIRSWFPSKLTMAAFIVAWGVTRWSEQ-MVGWETLQQKAIHIGIGGLCALIVAGITVWKEKTWMHDMK---QLARSRKKE 562          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|1183327314|gb|ORX57072.1| (Rft-1-domain-containing protein [Hesseltinella vesiculosa])

HSP 1 Score: 240.35 bits (612), Expect = 9.779e-68
Identity = 189/615 (30.73%), Postives = 299/615 (48.62%), Query Frame = 0
Query:    5 RGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGR-----------TTLVGLSSDTCEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVW---VLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPR--APSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVF--AGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRR 601
            R + FVL+Q++LR+     FG+ASV L+LLL+T LFLSREG+R  L R             +V   S   + ++  N+S++P +LG L + L+  F   N ++       +    R + +LF LAA +E   EP ++     +   LR + EG+A ++R ++TF L ++   +   + +LLAF  AQ  Y VVL + Y G+ +   LK   Q                           ++L+ L PR    +S ++ W++ S  AL   LT QS  KH+LT+GDK+++S  S+   QG+YA   NYGSL AR+LFQPLEE+GR +F++L                 +KK+ +T                      +A+   ++  +++  +++GLVF CF  NYT  L+ LL+ G++W          +  VL+ YC+YV  + +NG+TE FV AVA++QD+ RL         VF  AG  F  +   G  GLVLAN   + VRI +S +++  YF              H     LS        +P      +F   +A+T+ S K ++  D +   ++H+  GG  F  V   I W ++    +L+ + R
Sbjct:   35 RMLTFVLHQIVLRYTSAETFGIASVKLELLLSTILFLSREGYRCALVRGEGVQKPSRDSFQIVPEDSAAGQEQKITNISYIPTVLGLLCTCLACQFYLFNIDDTTADLYPH---YRLSVILFGLAAMIELSIEPFFIKALNSMYFQLRVSIEGVAVVLRCLVTFALTLYGAKLATSQYSLLAFALAQFVYGVVLAVGYVGFFL---LKVWRQD--------------------------ISLTSLFPRKLVSTSGTSFWLDESLTALGSTLTKQSLLKHVLTEGDKMLISALSTDRDQGIYAFVVNYGSLVARILFQPLEETGRTLFSKLL----------------NKKESRTN--------------------ERALALDVLLLILRCHVVLGLVFICFATNYTSTLIDLLV-GKKWSM------TQAPSVLALYCMYVPIMGINGITEGFVQAVASKQDLARLSYYMVGFSLVFMSAGALFMHVLPLGAFGLVLANMVNLGVRIGYSWYYIVCYF--------------HEEKRALSIW----SWWPSWATTMAFAFGWASTFWS-KQVIGWDSLTAKMQHIGVGGFCFVCVCFVIYWKDRSLLVELRQLFR 555          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|1183502658|gb|ORZ26290.1| (Rft protein-domain-containing protein [Lobosporangium transversale])

HSP 1 Score: 233.032 bits (593), Expect = 6.230e-64
Identity = 202/673 (30.01%), Postives = 319/673 (47.40%), Query Frame = 0
Query:    3 LQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTT---------LVGLSSDTCEFRQ---------------------------FVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTG-----LLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVW------VLPPEKA-----------LLAFGFAQVGYSVVLIL----VYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLR--LLALSHLLPRAPSSSS------ALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAML-KVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWH---GTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRR 601
            + R + F LNQ+LLR       G+ASV L+LLLNT LFLSREG R    R +          +  + D  + RQ                            +N+ + P+ +G  ++L ++ +  S+ +        NA  +R  G     +L+ LAA +E L+EP ++V Q  L    R + EGLA ++R ++T  L V+      V+  EK            +LAF  AQ  Y ++ +      +W            +  +  A K+  +D  + S  T+   +  L+++  LLPR     S        + +   L L+  LT QS  KH+LT+GDK++++  ++   QG+YA   NYGSL AR+LFQP+EE+ R +F+RL +  G V        +       + T V+ D  +  GA   ++     +L + L+  ++K  IL+GLVF  FG +YT  L+ L++ G  W       A     VLS YC YV  + +NG+TEA V AVA++ ++  L        AVF   T  F+      G  G+VLANC  + +RIL+S+ F+  Y+   + T+     E  V    + +     ++ P  +VLA+F AA+A T AS++  V  D +     H+  G   F  V+ SIL  E+ F  D+++I R
Sbjct:   38 VSRMLTFTLNQVLLRFTSAETLGIASVQLELLLNTILFLSREGVRCAAIRVSDDNGEDNNDPIKKNGDNSQSRQKNYTQHQDRQISSSPPLPGSEEYRLQKLINMVYAPIPIGAFMTLAAVGYYLSHVD--------NASEMRFPGYRLSIVLYGLAALIELLAEPMFMVAQYKLWFKTRVSVEGLAVIVRCVLTCALTVYGARQSVVMSNEKTNGSGSNANTMGVLAFAIAQFVYGLLTLGGFLLAFWSK--STEKNQAEKRRMHAALKKFDVDNATRSTETEADQKQDLISMKALLPRKLIRKSKDGKLETFFFDKELLKLSKTLTAQSLLKHILTEGDKMLMAGFTTEADQGVYAFVINYGSLVARILFQPMEETSRTLFSRLLSDIGPVAKSSTITTS---ITASSPTDVSKDDEKLDGASLTDTQRRNLVLSRDLLLTIMKFHILLGLVFIAFGTHYTATLIDLVV-GSYWSRQTIAPA-----VLSLYCWYVPIMGLNGITEAVVQAVASENELTALSYWMVGFSAVFCS-TGAFLMGALGLGAKGIVLANCVNLTMRILWSMWFLSGYYGRHIPTKTITTAESSV--VRMFSFVPWRNVLPSSIVLATFSAAYAITAASEQ-WVGWDRLIDKAVHISIGVSAFGLVMASILHAEKSFLWDIRNIVR 687          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|1021054551|emb|SAM09700.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 229.95 bits (585), Expect = 9.778e-62
Identity = 169/537 (31.47%), Postives = 268/537 (49.91%), Query Frame = 0
Query:    2 VLQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGR-------------TTLVGLSSDTCEFR---------QFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKA-------LLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSA--LWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVF---AGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYF 504
            ++ R + F+L+Q++LR+   A FG+ASV L+LLL+T LF+SREG+R  L R             T+  G +      R         +  N+S++P  LG + + L+  +  +  ++ +          R + +LF  AA +E   EP +++    +   LR A EG+A ++R +ITF L +W      A       +LAF  AQ  Y +V+ L Y GY                      M+   + + T        +S L P+   SS     W++P+   L   LT QS  KH+LT+GDK+++S  SS   QG+YA   NYG L  R+LFQPLEE+GR +F++L          +  E A++K    T   +A D                     ++  +++  +++GLVF CFG NYT  L+ LL+ G++W  G G     +  VLS+YCLYV  + +NG+TE FV AVA++ D+ +L +   V F++    AG+ F  +   G +GLVLAN   + +RI++S  ++  +F
Sbjct:   42 LISRMLTFILHQVVLRYTTAATFGIASVKLELLLSTILFISREGYRCALVRGGDGPAAEPVPESTSKEGSTIGAAPLRDNSAIGQEQKITNISYIPTALGLVTTCLACGYYLNTIDDTVASI---YPYYRTSVMLFGAAAMIELCVEPLFIMGLNRMYFQLRVAVEGVAVVLRCLITFALTLWGARGGGADGGNAYGILAFAVAQFAYGLVIALGYAGYF---------------------MEKVRSKEMT--------MSSLFPKQLISSDGRQYWLDPALTTLGSTLTKQSLLKHVLTEGDKMLISALSSDGDQGVYAFVVNYGCLVVRILFQPLEETGRTLFSKLL---------NKTETANEKHVDDTN-RMAMD---------------------ILMLIIRFHVILGLVFICFGTNYTATLIDLLV-GKKWSQGEG----NAPLVLSFYCLYVPIMGINGITEGFVQAVASKSDLAKL-SYYMVGFSLCFMGAGVLFMHVLQLGAIGLVLANMVNLGIRIMYSWSYIVGFF 509          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|224011042|ref|XP_002294478.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969973|gb|EED88312.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 229.95 bits (585), Expect = 9.598e-61
Identity = 206/644 (31.99%), Postives = 304/644 (47.20%), Query Frame = 0
Query:    2 VLQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTC----------------------EFRQ------------------------FVNLSWVPVLLGPLVSLLS-LAFLPSNHNEDIGGKGQNADAL--RQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLL-----VWVLPPEK-------------------ALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGI-------PGASKEAAMDTTSTSQTTQ--TPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFAR----LAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVA-TQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTL 558
            VL R  +F+L+QL +RHV  +  G A++ L+LLL TALF+ REGFRL L +  + G+++ +                       +F+Q                         +N+SW+ V  G ++S+L+ L  L S  + +       ++ +  +  G+L+C+A+ +ESLSEP  + C   +  T ++ +EG A + +++  F +L     VW     K                   A+ AFG +Q+ Y++    + +            + GI       P  S     D T+  QT    TPL      H L               HL L F L G   FKH LT+ DKIVLS  +  Y QG+YALA +YG LAARLL QPLEE+ RL+F+R    LA         +G+   D ++ +K +T          G  P    +    L+     L++ V+ +GL+FA    NYT +LLR +L G RW    G  +E S   LS +C+Y  FLA+NG TEAFVY VA + +DV +LG   AV   +FA ++   +R  G VGLV ANC  M +R  +S+++ R YF    +     GG+    S M+S       + PHPVVLA F  A+A T +S   L
Sbjct:   20 VLLRLTSFLLSQLTVRHVSVSTLGKANIVLELLLGTALFVGREGFRLGLTKN-IAGVANGSSGEEEKEDANGASPGDGGVPTKRKFQQHESYLDENKKENRQRDEQQMQQQRIINVSWLSVPTGAVMSILAVLMHLYSCSSNNNTSNANASEMMDYKLAGILYCIASFIESLSEPLVIRCLQEMDVTTKAKAEGAALVCKAVACFGMLHLTSSVWFWEAMKTIATRLELGVGGSGGQVCFAVTAFGVSQLVYAITFTTIMF------RKARATKDGIRWPKRIHPFVSNPYRSDDTTAHQTQSGTTPLTQNFDLHTL---------------HLILIFTLQG--LFKHALTEADKIVLSTLAGSYDQGVYALASSYGGLAARLLLQPLEENARLLFSRQGALLAQQLQDATTTNGSREKDTQQYEKKQTI---------GGGPNNLLSD---LESTYCFLLRAVLYIGLIFATIATNYTSLLLR-ILAGDRW----GSNSEASA-ALSAFCVYTAFLALNGTTEAFVYGVARSGRDVGKLGVAHAVVGGIFALISPGLVRSKGAVGLVTANCVCMGLRSAYSLYYARTYF--AKAEEALSGGKNDRIS-MIS------QIAPHPVVLALFSMAYAVTKSSRDVL 612          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|971518143|dbj|GAQ80068.1| (oligosaccharidyl-lipid flippase family [Klebsormidium nitens])

HSP 1 Score: 218.009 bits (554), Expect = 1.573e-59
Identity = 185/599 (30.88%), Postives = 292/599 (48.75%), Query Frame = 0
Query:    5 RGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTCEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAV-FAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDE-VEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRR 601
            R ++F+LN L+ R ++ A  GL++V   L+  T   +SREGFR    R+ L G +       + V+++W+ V +G LV+  ++  +       +      AD   Q  L+  +AA +E LSEP Y++ Q  LL  +R   E LATL +S++T+ LL+  +     L+ F +AQ+ Y++VL++ YWGY +               S+    +TT  S     PL        LP  P     L  +PS L +  A + QS  K  L +G+K VL +  S ++QG+Y + +  GSL  R + QP EES   MF++ A+          A   DD  +K             RG E           +VL+ A +K V L+GLVF  FG  Y+  LLRLL    + ++ A          L+ YCLYV+ +A+NG+TE+F++A A+++ +     +A V F+V    L+   ++  GT GL+LAN   M +RI +S+ F+  YF G               S   S R   P +     V+ +F+AA    + ++ T +  D        +++ GG  F GVLG+I   E+ FF ++ S+RR
Sbjct:   29 RVISFLLNVLIDRRLNAAEIGLSAVQFPLITTTIFMISREGFRRGCIRSDL-GDNPHQSAAARVVSVAWLSVPVGLLVTCATVGTILWWQQLPV------ADVRTQALLVLGVAAGVELLSEPLYILAQCLLLLRVRVVIETLATLGKSLVTYALLLQGIGKAGGLV-FAYAQLTYALVLLVGYWGYFL---------------SRARRRETTGAS----VPL--------LPSRPKGGPLL--DPSLLRVCGAFSWQSVEKLALAEGEKFVLVLSGSQHNQGVYGIVEKLGSLVVRSVLQPFEESAFTMFSKAASS---------ANKKDDDAQKPDV----------RGVE-----------RVLLLA-IKGVSLLGLVFVAFGPPYSYTLLRLLYGRDKSDSEAPTA-------LACYCLYVMVMALNGITESFLHATASERGLA-WNNVALVVFSVCHVALSVALVQARGTTGLILANVCNMTLRITYSMVFILRYFKG---------------SPTFSIRRAVPSIR----VIGTFIAAALTAHWAEVTFLDHDRFYTSAATYIMVGGACFVGVLGAIYTAERSFFSEIASLRR 532          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|1032652418|gb|OAQ33692.1| (Rft-1-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 215.312 bits (547), Expect = 2.050e-57
Identity = 194/669 (29.00%), Postives = 314/669 (46.94%), Query Frame = 0
Query:    3 LQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTCE--------------------------FRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVW---------------VLPPEKALLAFGFAQVGYSVVLIL----VYWGYLIYVSLKGGGQTGIPGASKEAAM---DTTSTSQTTQTPLRLLALSHLLPR------APSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAML-KVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALA--AVSFAVFAGLTFPFIRWHGTV-----GLVLANCAGMLVRILFSIHFVRAYFD------GVVSTRKQDGGEGHVSSTMLSTREKQP--DMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRR 601
            + R + F LNQ+LLR       G+ASV L+LLLNT LFLSREG R    R     +S D+ E                           ++ VN+ + P+ +G L++ L++ +      +   G        R +  L+ ++A +E L+EP ++V Q  L    R + EG A ++R ++T  L V+                      +LAF  AQ  Y ++ +      +W        K   +  +      AA+   D  +      +    +++S LLPR          S + + +   L L+  LT QS  KH+LT+GDK++++  +   +QG+YA   NYGSL AR+LFQP+EE+ R +F+RL +        D A  +     K T +   ++          E+     +L + L+  ++K  IL+GLVF  FG +YT  L+ L++ GR W T        + +VLS YC YV  + +NG+TEA V AVA++++   LG L+   + F+     T  F+   GT+     G+VLANC  +++RI++S+ F+  Y+       G  ST  ++G        +L+     P  ++ P P VL +F AAF  T A+ +  +  + +     H+  G   F  V+G I  TE+ F  D++SI R
Sbjct:   63 VSRMLTFTLNQVLLRFTSAETLGIASVQLELLLNTILFLSREGVRCAAIR-----VSDDSTEGEEGTTSSDNKGMEKMRLTPGSEAYRLQKLVNMVYAPIPVGALMTCLAVGYYLLQVTDASEGL---FPGYRLSIYLYGISALVELLAEPMFMVAQYKLWFKTRVSVEGTAVIVRCVLTCALTVYGSRTAVTGSSSEGSNTNTNTMGVLAFAIAQFVYGLLTLGGFLLAFWS-------KSTERRDLDRKRMAAAIKKRDGIAVEDQPNSDDDTVSMSALLPRRLTRVGKDGQSESFYFDKELLKLSKTLTSQSLLKHILTEGDKMMMTKFADVTAQGVYAFVVNYGSLIARILFQPMEETSRTLFSRLLS--------DIAPGSTPSGNKDTNSEKTSNTTTPTSRTLTETQLDNLVLSRNLLLTIMKFHILLGLVFIAFGTHYTATLIDLVV-GRYWST-----VTKAPQVLSLYCYYVPIMGLNGITEAVVQAVASEKE---LGVLSYWMIGFSAVFCSTGAFL--MGTLNLKAEGIVLANCVNLIMRIVWSMWFLSGYYGRYIPIAGKSSTTAKEG--------VLARFAYVPWQNIIPRPTVLVAFGAAFVLT-ATTEQWIGWEGLYNKAVHLGIGVAAFVVVMGVIFVTEKQFLRDIQSIVR 688          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|298712990|emb|CBJ26892.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 215.312 bits (547), Expect = 6.242e-57
Identity = 206/608 (33.88%), Postives = 280/608 (46.05%), Query Frame = 0
Query:    3 LQRGVNFVLNQLLLRHVDPAV--------------FGLASVPLDLLLNTALFLSREGFRLTLGR---------TTLVGLSSDTCEFRQ---------------------FVNLSWVPVLLG-PLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLI--YVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLR--------LLALSHLLPRAP----SSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVL------------------SIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPG------------------------ESAAS-----QAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYF 504
            +QR   FVLN LL R +  A               +G A++ LDL+ +TALFL+RE FR+ L R         T + G +      +Q                     FVN +W+   +G     L+ LA+     N+D  G  +N    RQ   L CLAA++E + EP  L+ Q  LL  +R  +E  A L+  +  ++L   V      +L+FG+AQ+ +SV L   Y  + +      + G +T +P       +  T     T  PL            +   LP  P     S  +  V+   L LA+AL GQS  KH+LT+GDKIVL                  S G + Y QG+YA+A  YGSLAARLLFQPLEE+ RLMF++L           GAEA + ++        AT      GA                           + AA+     +A +  L+  L+K V++ GLVF CFGF+YT  LLRLLL G+    G    +E    VLSWYC+YVLFLA NGM EAF  AVA    +  +GA    SFA F  L  P     GT GLV+AN AGM  R++ S  F+R +F
Sbjct:    6 VQRASTFVLNVLLQRAMLSAAASDTRQPRNSALEEYGAAAITLDLISSTALFLAREPFRVALARSKVPIADEKTWVAGGNKGVAPGQQLTGERERARRRRRRREAYRRRFVNTAWISAPVGLAFAGLVRLAYPWVIRNDDFQGVEEN----RQAASLVCLAAAVELMCEPLALIFQYRLLVDVRVRAEAAAVLVLGVSRYLL---VTRAGMGVLSFGYAQLFHSVTLFTWYVLFAVKDVARARAGAETTLPPPPPSTLVAATGQPPGTARPLAQDGGDDEGFARVRGWLPSRPIRDDDSDESGLVDSGKLRLAWALAGQSLLKHVLTEGDKIVLARATSSEHGCHRHSGGGCSQGGTLYEQGVYAIASGYGSLAARLLFQPLEEAARLMFSKL-----------GAEAGESRQGAVPPAVTATSKALTMGATHSSLGRGGGQGRQDGGGGYGQEGDSTDGAANGKLRLRAKMASLLATLLKLVLMAGLVFVCFGFHYTETLLRLLLAGKGGGGGFSAVSE-VARVLSWYCVYVLFLAANGMCEAFACAVAQGGQLTGMGAGLVASFAAFWVLVGPLTGRFGTRGLVMANAAGMACRVICSGLFIRRFF 594          
BLAST of EWM26756.1 vs. NCBI_GenBank
Match: gi|570313568|gb|ETO61516.1| (hypothetical protein F444_20492, partial [Phytophthora parasitica P1976])

HSP 1 Score: 209.92 bits (533), Expect = 2.895e-56
Identity = 177/610 (29.02%), Postives = 296/610 (48.52%), Query Frame = 0
Query:    3 LQRGVNFVLNQLLLRHVDPAVFGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDT-----CEFRQFVNLSWVPVLLGPLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSSALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSIGSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKKKKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIR---WHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSSTMLSTREKQPDMFPHPVVLASFVAAFAATYASDKTLV---SVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFF-EDLKSIR 600
            LQR + F  N L+LR +   V G  +V L+L L  ++FL R+GFRL   R  +  L S          +Q VN++W+   +   V+ L L +       +     +  D      +++C AA +E+L+EP +++    +L + + A++  A L+R+ + +V +V +   E +L A+G A++ Y++ L++++     +  + G                    S + +    L ++  LLP  P    A W     +AL   L+ QS  K+LL +GDK VL+  +S    G+Y L  N GSL  R++F P+EE+ + +F++LA        +  +E  DDK+ KK            +    G++     +         K + LVGLVF CFG +Y   L+ LL        GA    +G G  LS YC+Y+ FL VNG++EA V+A+    +++RL  L  V FA++A     F++   W GT+GL+LANC  M  RIL+ + F+ +YF       +Q   + H S++ L+         P  +V+A+F ++   T  S + L+   S+  V   L HV  G + F G + ++   E+      LK++R
Sbjct:   29 LQRLLTFAANSLVLRKLHLNVTGAVTVRLELAL-ASIFLLRDGFRLAFLR--MPSLDSKAPGNGKAHIQQLVNVAWLSTAISWAVAALVLVYSAVGSPSETLKGDEALDGYSAVLVMYCGAAMIEALAEPMFVLAHASVLVSWQVAAQSAAFLVRAAVQYVGVVVL---ELSLTAYGVAELSYALTLLIMF-AVFFWRRVYG--------------------SSSGEEKFALTSMRQLLPGKPDGD-ADWCHNELMALLVPLSVQSGVKYLLAEGDKWVLTGFASLQHMGVYGLVSNLGSLVPRIVFLPIEEATKTIFSKLALAQ-----KQKSEDNDDKESKK------------KSLVDGQTLLLVLL---------KLMNLVGLVFVCFGTSYANTLVLLLY-------GAEKARQGVGAALSVYCVYIPFLGVNGVSEAVVHAIGDDHELMRLNKLLGVFFAIYAFSALVFMQVLDW-GTLGLILANCVNMACRILYCLTFLASYF-------RQVSPKAHSSNSFLNGISFWRRSLPDRLVMAAFFSSMVLTAISQRVLLGSASISLVRHAL-HVAVGVVCFGGTILALYIKERHLLGAQLKALR 568          
The following BLAST results are available for this feature:
BLAST of EWM26756.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108844|gb|EWM26756.1|0.000e+0100.00RFT1 family lipid transporter [Nannochloropsis gad... [more]
gi|661175158|emb|CDH61521.1|1.169e-6831.37oligosaccharide translocation protein rft1 [Lichth... [more]
gi|1183327314|gb|ORX57072.1|9.779e-6830.73Rft-1-domain-containing protein [Hesseltinella ves... [more]
gi|1183502658|gb|ORZ26290.1|6.230e-6430.01Rft protein-domain-containing protein [Lobosporang... [more]
gi|1021054551|emb|SAM09700.1|9.778e-6231.47hypothetical protein [Absidia glauca][more]
gi|224011042|ref|XP_002294478.1|9.598e-6131.99predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|971518143|dbj|GAQ80068.1|1.573e-5930.88oligosaccharidyl-lipid flippase family [Klebsormid... [more]
gi|1032652418|gb|OAQ33692.1|2.050e-5729.00Rft-1-domain-containing protein [Mortierella elong... [more]
gi|298712990|emb|CBJ26892.1|6.242e-5733.88conserved unknown protein [Ectocarpus siliculosus][more]
gi|570313568|gb|ETO61516.1|2.895e-5629.02hypothetical protein F444_20492, partial [Phytopht... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4078rna4078Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications