EWM26763.1, cds4064 (CDS) Nannochloropsis gaditana

Overview
NameEWM26763.1
Unique Namecds4064
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:791483..792145 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26763.1
Productenoyl- hydratase isomerase
Orig transcript idgnl|cribi|Naga_100001g38.8274.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:791483..792145 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
Homology
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|585108851|gb|EWM26763.1| (enoyl- hydratase isomerase [Nannochloropsis gaditana])

HSP 1 Score: 446.047 bits (1146), Expect = 1.628e-158
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query:    1 MLFRSGARILGAVRQSRCRLQSTFSQHSLSSSAMSPPSSPPSEEPEATTDPILVERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAGRDGGREGGSGPGASAARLPLRQSNDRRARNLHLYAIPPSLPSSLPFPRLPAGRCL 220
            MLFRSGARILGAVRQSRCRLQSTFSQHSLSSSAMSPPSSPPSEEPEATTDPILVERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAGRDGGREGGSGPGASAARLPLRQSNDRRARNLHLYAIPPSLPSSLPFPRLPAGRCL
Sbjct:    1 MLFRSGARILGAVRQSRCRLQSTFSQHSLSSSAMSPPSSPPSEEPEATTDPILVERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAGRDGGREGGSGPGASAARLPLRQSNDRRARNLHLYAIPPSLPSSLPFPRLPAGRCL 220          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|1055033398|ref|WP_066784223.1| (enoyl-CoA hydratase [Chloroflexus islandicus] >gi|1032074200|gb|OAN47284.1| enoyl-CoA hydratase [Chloroflexus islandicus])

HSP 1 Score: 115.161 bits (287), Expect = 1.051e-27
Identity = 59/113 (52.21%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   54 VERRALAGTKG-GYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            VE   L+   G G   +TLNRPR  NA+++  L  LQA  D + A+   R VVL  AG AFC GHDL QM  +  D+QY+E +FARCS+ ML+IQR+PQPV+A V+G+AT AG
Sbjct:    8 VEPYVLSDIDGRGIARLTLNRPRQFNALSDEMLAALQAELDAIAANPQARVVVLAAAGKAFCAGHDLKQMQ-AHPDQQYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAG 119          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|880916680|ref|WP_048675127.1| (enoyl-CoA hydratase [Candidatus Competibacter denitrificans] >gi|590102675|emb|CDI03855.1| putative enoyl-CoA hydratase [Candidatus Competibacter denitrificans Run_A_D11])

HSP 1 Score: 115.161 bits (287), Expect = 1.164e-27
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 0
Query:   55 ERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            E   L  T GG + +TLNRP+  NA++ A L  LQA  DR+ ADK VR VV+ G+G AFC GHDL +M  +  D+ +   +FA+C R ML+I R+PQPV+A V+G+AT AG
Sbjct:    9 EAFVLCQTDGGIVTLTLNRPKQYNALSQAMLAALQAELDRVAADKTVRVVVIAGSGPAFCAGHDLKEMR-AHTDQAFHHALFAQCGRVMLTINRMPQPVVARVHGIATAAG 118          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|1082711395|gb|OGA32306.1| (enoyl-CoA hydratase [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23])

HSP 1 Score: 114.39 bits (285), Expect = 1.878e-27
Identity = 56/121 (46.28%), Postives = 81/121 (66.94%), Query Frame = 0
Query:   45 PEATTDPILVERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            P A T+P+L+ + A     GG   +TLNRP   N+++ A + ELQA  DR+ AD  VR V++ GAG AFC GHDL +M  S   K + +++F +CS+ ML++ R+PQPV+A V+G+AT AG
Sbjct:    6 PAAATEPLLLRQEA-----GGVATLTLNRPAQFNSLSQALMSELQAELDRIAADAGVRVVIMAGAGKAFCAGHDLKEMR-SDATKGFQQQLFRQCSKLMLTLVRMPQPVIARVHGIATAAG 120          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|759996046|ref|WP_043679626.1| (enoyl-CoA hydratase [Castellaniella defragrans])

HSP 1 Score: 114.39 bits (285), Expect = 2.206e-27
Identity = 62/132 (46.97%), Postives = 76/132 (57.58%), Query Frame = 0
Query:   34 MSPPSSPPSEEPEATTDPILVERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            M+  S+ P + P A+ DP+L ERR       G L +TLNRP   NA++   L  LQA FD    D  +R VVL   G AFC GHDL QM    GD+ Y+  +F RC R M SI R P PV+A V+G AT AG
Sbjct:    1 MTQASNAP-DAPNASNDPVLDERR------DGVLTLTLNRPDQFNALSEDMLAALQARFDACRDDTGLRVVVLAANGRAFCAGHDLKQMRGHAGDRDYYNDLFGRCGRLMQSIARCPVPVIARVHGTATAAG 125          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|506421057|ref|WP_015940776.1| (enoyl-CoA hydratase [Chloroflexus aggregans] >gi|219543179|gb|ACL24917.1| Enoyl-CoA hydratase/isomerase [Chloroflexus aggregans DSM 9485])

HSP 1 Score: 112.849 bits (281), Expect = 8.537e-27
Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 0
Query:   54 VERRALAGTKG-GYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            VE   L  T   G   +TLNRPR  NA++   L  LQA  D +  +  VR VVL GAG AFC GHDL QM  +  D+ Y+E +FARCS+ ML+IQR+PQPV+A V+G+AT AG
Sbjct:    8 VEPYVLCETDSRGVARITLNRPRQFNALSEEMLAALQAQLDAIATNPHVRVVVLAGAGKAFCAGHDLKQML-AHPDQHYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAG 119          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|501214212|ref|WP_012257230.1| (MULTISPECIES: enoyl-CoA hydratase [Chloroflexus] >gi|163846919|ref|YP_001634963.1| enoyl-CoA hydratase/isomerase [Chloroflexus aurantiacus J-10-fl] >gi|163668208|gb|ABY34574.1| Enoyl-CoA hydratase/isomerase [Chloroflexus aurantiacus J-10-fl] >gi|222448620|gb|ACM52886.1| Enoyl-CoA hydratase/isomerase [Chloroflexus sp. Y-400-fl])

HSP 1 Score: 112.079 bits (279), Expect = 1.511e-26
Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   52 ILVERRALAGTKG-GYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            + VE   L+   G G + +TLNRPR  NA++   L+ LQ   D + A+   R VVL GAG AFC GHDL QM  +  D+ Y+E +FARC++ ML+IQR+PQPV+A V+G+AT AG
Sbjct:    6 VAVEPFVLSEIDGRGVVRLTLNRPRQFNALSEEMLEALQRELDAIAANPQARVVVLAGAGKAFCAGHDLKQMQ-AHPDQAYYEDLFARCTQMMLTIQRLPQPVIARVHGIATAAG 119          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|873927992|ref|WP_048628995.1| (enoyl-CoA hydratase [Pandoraea apista] >gi|857644283|emb|CFB63028.1| 2,3-dehydroadipyl-CoA hydratase [Pandoraea apista] >gi|961567157|gb|ALS65248.1| enoyl-CoA hydratase [Pandoraea apista])

HSP 1 Score: 112.079 bits (279), Expect = 1.627e-26
Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 0
Query:   42 SEEPEATTDPILVERRALAGTKGGYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            SE   ATT+P+++  R  AG   G + +TLNRPRH NA++ A L  LQ   D +  D   R VVL  AG AFC GHDL +M  ++    Y+  +F +C+R ML++QR+PQPV+A V+G+AT AG
Sbjct:    4 SESIAATTEPLVLVSRG-AGELAGVVTLTLNRPRHFNALSEAMLDALQHALDDIALDASARVVVLGAAGPAFCAGHDLKEMR-AEPSLDYYRTLFNQCTRVMLTMQRMPQPVVARVHGIATAAG 125          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|670512371|ref|WP_031460084.1| (enoyl-CoA hydratase [Chloroflexus sp. MS-G])

HSP 1 Score: 112.079 bits (279), Expect = 1.947e-26
Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 0
Query:   65 GYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            G + +TLNRPR  NA++   L  LQ   D + AD   R VVL GAG AFC GHDL QM  +  ++ Y+E +FARCS+ ML+IQR+PQPV+A V+G+AT AG
Sbjct:   20 GVVSLTLNRPRQFNALSEEMLAALQNELDMISADPQARVVVLAGAGKAFCAGHDLKQMQ-AHPEQSYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAG 119          
BLAST of EWM26763.1 vs. NCBI_GenBank
Match: gi|501068370|ref|WP_012119459.1| (enoyl-CoA hydratase [Roseiflexus castenholzii] >gi|156232246|gb|ABU57029.1| Enoyl-CoA hydratase/isomerase [Roseiflexus castenholzii DSM 13941])

HSP 1 Score: 111.694 bits (278), Expect = 2.119e-26
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 0
Query:   65 GYLLVTLNRPRHSNAMNNATLQELQAVFDRLPADKWVRAVVLTGAGHAFCGGHDLYQMHDSQGDKQYFERMFARCSRFMLSIQRVPQPVLAAVNGLATGAG 165
            G + +TLNRPR  NA++   L  LQA  D + AD   R V++ G G AFC GHDL QM  +   ++Y+E +FARCS+ ML+IQR+PQPV+A V+G+AT AG
Sbjct:   22 GVVRLTLNRPRQFNALSEEMLAALQAELDAVAADPQARVVIIAGQGKAFCAGHDLKQMR-ANSSQEYYEELFARCSQVMLTIQRLPQPVIARVHGIATAAG 121          
The following BLAST results are available for this feature:
BLAST of EWM26763.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108851|gb|EWM26763.1|1.628e-158100.00enoyl- hydratase isomerase [Nannochloropsis gadita... [more]
gi|1055033398|ref|WP_066784223.1|1.051e-2752.21enoyl-CoA hydratase [Chloroflexus islandicus] >gi|... [more]
gi|880916680|ref|WP_048675127.1|1.164e-2750.45enoyl-CoA hydratase [Candidatus Competibacter deni... [more]
gi|1082711395|gb|OGA32306.1|1.878e-2746.28enoyl-CoA hydratase [Betaproteobacteria bacterium ... [more]
gi|759996046|ref|WP_043679626.1|2.206e-2746.97enoyl-CoA hydratase [Castellaniella defragrans][more]
gi|506421057|ref|WP_015940776.1|8.537e-2752.21enoyl-CoA hydratase [Chloroflexus aggregans] >gi|2... [more]
gi|501214212|ref|WP_012257230.1|1.511e-2649.57MULTISPECIES: enoyl-CoA hydratase [Chloroflexus] >... [more]
gi|873927992|ref|WP_048628995.1|1.627e-2646.77enoyl-CoA hydratase [Pandoraea apista] >gi|8576442... [more]
gi|670512371|ref|WP_031460084.1|1.947e-2653.47enoyl-CoA hydratase [Chloroflexus sp. MS-G][more]
gi|501068370|ref|WP_012119459.1|2.119e-2651.49enoyl-CoA hydratase [Roseiflexus castenholzii] >gi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4074rna4074Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications