EWM26688.1, cds4063 (CDS) Nannochloropsis gaditana

Overview
NameEWM26688.1
Unique Namecds4063
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:788778..788800 +
Alignment locationCM002462.1:789032..789209 +
Alignment locationCM002462.1:789576..789619 +
Alignment locationCM002462.1:789668..789893 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26688.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g40.8199.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:788778..788800 +
CM002462.1supercontigCM002462.1:789032..789209 +
CM002462.1supercontigCM002462.1:789576..789619 +
CM002462.1supercontigCM002462.1:789668..789893 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|585108776|gb|EWM26688.1| (hypothetical protein Naga_100001g40 [Nannochloropsis gaditana])

HSP 1 Score: 320.472 bits (820), Expect = 8.087e-111
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MFGWLHFLSSCQQRMGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWRLLLSCGHVFRDCLSSRDAYTGGWHDEGVIATLSYPIRPGVAWIVRRSEGPSCMSNFCFKRGSVEEEHLGRCFC 156
            MFGWLHFLSSCQQRMGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWRLLLSCGHVFRDCLSSRDAYTGGWHDEGVIATLSYPIRPGVAWIVRRSEGPSCMSNFCFKRGSVEEEHLGRCFC
Sbjct:    1 MFGWLHFLSSCQQRMGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWRLLLSCGHVFRDCLSSRDAYTGGWHDEGVIATLSYPIRPGVAWIVRRSEGPSCMSNFCFKRGSVEEEHLGRCFC 156          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|298712011|emb|CBJ32950.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 85.5001 bits (210), Expect = 4.747e-19
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWRLLLSCGHVFRDCLS 97
            MGGGR F+FP H+W+P+GGW+ NP +W+ NT     GIG+A  +   +S+  ERRPIAPA+HIPSQ W     C H   D  S
Sbjct:    1 MGGGRHFHFPKHVWSPAGGWWVNPPHWKRNTGFAFVGIGLAFIAIARISSDRERRPIAPAFHIPSQRW-----CKHAKEDDPS 78          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1210525349|dbj|GAX15867.1| (hypothetical protein FisN_2Lu418 [Fistulifera solaris])

HSP 1 Score: 81.2629 bits (199), Expect = 1.643e-17
Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWRLLLSCGHVFRD 94
            MGGG W+Y P  +W+P+GGW+ NP NW+ NT +    +G+ A   F +S+S ERRPI P WHIPSQ W     C H   D
Sbjct:    1 MGGGGWYYVPK-VWSPAGGWWNNPANWKRNTGIAGAVVGILAVGLFQVSSSRERRPIPPPWHIPSQYW-----CKHAVED 74          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1101833938|ref|XP_019007920.1| (hypothetical protein I206_07556 [Kwoniella pini CBS 10737] >gi|1045453181|gb|OCF46701.1| hypothetical protein I206_07556 [Kwoniella pini CBS 10737])

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-15
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
            MGGG  + FP  +WTPSGGW+  P NW  NT + + GIG+A F  + LSAS E+R IAP   IPSQ W
Sbjct:    1 MGGGAHYPFPKEVWTPSGGWWSRPSNWATNTAICVFGIGIATFGVWRLSASKEQRHIAPTRAIPSQRW 68          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1102215969|ref|XP_019032531.1| (hypothetical protein L198_03298 [Tsuchiyaea wingfieldii CBS 7118] >gi|1062152839|gb|ODN99454.1| hypothetical protein L198_03298 [Tsuchiyaea wingfieldii CBS 7118])

HSP 1 Score: 74.3294 bits (181), Expect = 8.709e-15
Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
            MGGG  + +P  +WTPSGGW+  P NW+ NT   LGGI VA F  + LSA+ E R IAP   IPSQ W
Sbjct:    1 MGGGGHYPYPKEVWTPSGGWWSRPSNWKGNTAFALGGILVATFGVWRLSANREERHIAPTRPIPSQMW 68          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1214823778|gb|OWZ59727.1| (hypothetical protein C356_00738 [Cryptococcus neoformans var. grubii c45])

HSP 1 Score: 73.1738 bits (178), Expect = 2.949e-14
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
            MGGG  + +P  +WTPSGGW+  P NW++NT + + GI +A F  + LSA+ E R IAP   IPSQ W
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWTRPSNWKSNTAICIVGITIATFGVWRLSANREERHIAPTRPIPSQMW 68          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1069912879|ref|XP_018259750.1| (hypothetical protein I303_07818 [Kwoniella dejecticola CBS 10117] >gi|1039708044|gb|OBR81908.1| hypothetical protein I303_07818 [Kwoniella dejecticola CBS 10117])

HSP 1 Score: 73.1738 bits (178), Expect = 3.036e-14
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
             GGG  + FP  +WTPSGGW+  P NW  NT + + GIG+A F  + LSAS E+R IAP   IPSQ W
Sbjct:    5 QGGGAHYPFPKEVWTPSGGWWSRPSNWATNTAICVFGIGIATFGVWRLSASKEQRHIAPTRAIPSQRW 72          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1045487025|gb|OCF78662.1| (hypothetical protein I204_00604 [Kwoniella mangroviensis CBS 8886])

HSP 1 Score: 72.7886 bits (177), Expect = 3.884e-14
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0
Query:   11 CQQRMGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
            C  + GGG  + +P  +WTPSGGW+  P NW  NT + + GIG+A F  + LSAS E+R IAP   IPSQ W
Sbjct:    3 CAIQDGGGAHYPYPKEVWTPSGGWWSRPSNWATNTAICVFGIGLATFGVWRLSASKEQRHIAPTRPIPSQRW 74          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|799313430|ref|XP_012046405.1| (hypothetical protein CNAG_00715 [Cryptococcus neoformans var. grubii H99] >gi|540393032|gb|AFR92845.2| hypothetical protein CNAG_00715 [Cryptococcus neoformans var. grubii H99] >gi|1211151731|gb|OWT37912.1| hypothetical protein C362_04936 [Cryptococcus neoformans var. grubii Bt1] >gi|1214799903|gb|OWZ36632.1| hypothetical protein C347_00807 [Cryptococcus neoformans var. grubii AD2-60a] >gi|1214812031|gb|OWZ48302.1| hypothetical protein C343_00731 [Cryptococcus neoformans var. grubii C23] >gi|1214819939|gb|OWZ56010.1| hypothetical protein C353_00737 [Cryptococcus neoformans var. grubii AD1-83a] >gi|1214822024|gb|OWZ58071.1| hypothetical protein C368_01244 [Cryptococcus neoformans var. grubii 125.91] >gi|1214826287|gb|OWZ61263.1| hypothetical protein AYX15_06516 [Cryptococcus neoformans var. grubii] >gi|1214835599|gb|OWZ70111.1| hypothetical protein AYX14_04513 [Cryptococcus neoformans var. grubii] >gi|1214846745|gb|OWZ80896.1| hypothetical protein C365_00722 [Cryptococcus neoformans var. grubii Bt85])

HSP 1 Score: 72.7886 bits (177), Expect = 4.492e-14
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
            MGGG  + +P  +WTPSGGW+  P NW+ NT + + GI +A F  + LSA+ E R IAP   IPSQ W
Sbjct:    1 MGGGAQYPYPKEVWTPSGGWWTRPSNWKGNTAICIVGITIATFGVWRLSANREERHIAPTRPIPSQMW 68          
BLAST of EWM26688.1 vs. NCBI_GenBank
Match: gi|1023190455|gb|KZS88051.1| (hypothetical protein SISNIDRAFT_498197 [Sistotremastrum niveocremeum HHB9708])

HSP 1 Score: 73.559 bits (179), Expect = 7.253e-14
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    6 HFLSSCQQRMGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSW 82
            +F     + M GG  F +P  +W+PSGGW+  P NW+ANTL V  GI  A ++TF LSAS E R + P   IPS +W
Sbjct:   46 NFFLKRDRNMAGGARFPYPKQVWSPSGGWWTRPSNWKANTLFVGVGIAAATYATFRLSASHEWRYVEPIKPIPSMAW 122          
The following BLAST results are available for this feature:
BLAST of EWM26688.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108776|gb|EWM26688.1|8.087e-111100.00hypothetical protein Naga_100001g40 [Nannochlorops... [more]
gi|298712011|emb|CBJ32950.1|4.747e-1950.60conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210525349|dbj|GAX15867.1|1.643e-1748.75hypothetical protein FisN_2Lu418 [Fistulifera sola... [more]
gi|1101833938|ref|XP_019007920.1|4.706e-1554.41hypothetical protein I206_07556 [Kwoniella pini CB... [more]
gi|1102215969|ref|XP_019032531.1|8.709e-1554.41hypothetical protein L198_03298 [Tsuchiyaea wingfi... [more]
gi|1214823778|gb|OWZ59727.1|2.949e-1450.00hypothetical protein C356_00738 [Cryptococcus neof... [more]
gi|1069912879|ref|XP_018259750.1|3.036e-1452.94hypothetical protein I303_07818 [Kwoniella dejecti... [more]
gi|1045487025|gb|OCF78662.1|3.884e-1450.00hypothetical protein I204_00604 [Kwoniella mangrov... [more]
gi|799313430|ref|XP_012046405.1|4.492e-1450.00hypothetical protein CNAG_00715 [Cryptococcus neof... [more]
gi|1023190455|gb|KZS88051.1|7.253e-1446.75hypothetical protein SISNIDRAFT_498197 [Sistotrema... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4073rna4073Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications