EWM26650.1, cds4042 (CDS) Nannochloropsis gaditana

Overview
NameEWM26650.1
Unique Namecds4042
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:715448..715978 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26650.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g61.8161.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:715448..715978 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26650.1 vs. NCBI_GenBank
Match: gi|585108738|gb|EWM26650.1| (hypothetical protein Naga_100001g61 [Nannochloropsis gaditana])

HSP 1 Score: 363.999 bits (933), Expect = 1.828e-127
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 
Query:    1 MVIDSIQYDIISSWESYACSSSTITAEAKSSRNRTIAPTRTRVCKSAISMSHMMNVLAHNKTFCVPCLNSSRAFRASQRGLERAMSAPATLYRLHDIPIASSWSLGLRDDFLKLSDRPQRQSQKANCCRSRREIDPDCIACGATRFCVESTSVDTQEHAYHQMQQTTRCFADVGRC 176
            MVIDSIQYDIISSWESYACSSSTITAEAKSSRNRTIAPTRTRVCKSAISMSHMMNVLAHNKTFCVPCLNSSRAFRASQRGLERAMSAPATLYRLHDIPIASSWSLGLRDDFLKLSDRPQRQSQKANCCRSRREIDPDCIACGATRFCVESTSVDTQEHAYHQMQQTTRCFADVGRC
Sbjct:    1 MVIDSIQYDIISSWESYACSSSTITAEAKSSRNRTIAPTRTRVCKSAISMSHMMNVLAHNKTFCVPCLNSSRAFRASQRGLERAMSAPATLYRLHDIPIASSWSLGLRDDFLKLSDRPQRQSQKANCCRSRREIDPDCIACGATRFCVESTSVDTQEHAYHQMQQTTRCFADVGRC 176
The following BLAST results are available for this feature:
BLAST of EWM26650.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108738|gb|EWM26650.1|1.828e-127100.00hypothetical protein Naga_100001g61 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4052rna4052Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications