EWM26587.1, cds4039 (CDS) Nannochloropsis gaditana

Overview
NameEWM26587.1
Unique Namecds4039
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:709202..709304 +
Alignment locationCM002462.1:709581..710623 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26587.1
ProductUAA transporter
Orig transcript idgnl|cribi|Naga_100001g64.8098.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:709202..709304 +
CM002462.1supercontigCM002462.1:709581..710623 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0015780nucleotide-sugar transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005794Golgi apparatus
Vocabulary: INTERPRO
TermDefinition
IPR029663GONST4
IPR013657UAA
Homology
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|585108675|gb|EWM26587.1| (UAA transporter [Nannochloropsis gaditana])

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
Query:    1 MDFLPAHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAEVEREANAKITELDTVPLIVSTEGKKLAFFGHQADDRQAPAGAV 381
            MDFLPAHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAEVEREANAKITELDTVPLIVSTEGKKLAFFGHQADDRQAPAGAV
Sbjct:    1 MDFLPAHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAEVEREANAKITELDTVPLIVSTEGKKLAFFGHQADDRQAPAGAV 381          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|223998396|ref|XP_002288871.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975979|gb|EED94307.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 300.442 bits (768), Expect = 2.181e-96
Identity = 157/348 (45.11%), Postives = 221/348 (63.51%), Query Frame = 0
Query:    1 MDFLPAHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPT--DRSLNSIEFFAMGTELEKDELAEVEREANAK 346
            ++F P   +  LAVA+YS CSG+++L NKL +H +P PSLV   QL + +  I       V+  DP++   +KPYL YT+AF LGVYCNM++L+ SNVETVI+FR+  PL V++ D +FLGRE PS RS +AL  IA+GAYGY  TD  F+  GL AY W   Y + I FEM YGKKI S +   +  GP  YTN L   PM    Y+ G++  F      R  +   L  ++T+ VV++++  ++GT IGY+ W CRS VSA ++TL+GV+NK +T+L+N+ IWD+HA+  GI +L LCL+GG+FY QAPMR T  D + +  +  A   E  + E+  + R  N +
Sbjct:    3 LNFSP-KTQTALAVAAYSFCSGSLVLVNKLILHQLPYPSLVITFQLWATLFFIQIGDAFHVLDVDPIKWKCIKPYLAYTVAFSLGVYCNMKSLSMSNVETVIVFRALAPLLVSVLDAMFLGREWPSARSWVALSVIAVGAYGYALTDEAFQTQGLIAYLWPTAYLIVISFEMAYGKKIISAVELKTRTGPVLYTNMLGWPPMLGFAYMGGEYGRFYNDLTDRAVRDEPL--FSTSAVVLMLLGCIVGTGIGYSGWWCRSKVSAASYTLIGVLNKCLTVLVNLMIWDQHAAVEGIASLSLCLVGGAFYAQAPMRKTSHDHAESGGKTPAKDEE-RQQEMGPLLRRGNGE 346          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|929770970|ref|XP_014160418.1| (hypothetical protein SARC_01346 [Sphaeroforma arctica JP610] >gi|906958333|gb|KNC86516.1| hypothetical protein SARC_01346 [Sphaeroforma arctica JP610])

HSP 1 Score: 294.664 bits (753), Expect = 1.015e-94
Identity = 143/309 (46.28%), Postives = 213/309 (68.93%), Query Frame = 0
Query:    5 PAHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMR 313
            P    +  A+ +YS+CSGT+LL NK+ +H++P+P+L+T+ QL+ A+ I+  ++ +++   +  +  K+ PY  YTIAFV G+Y NMRAL   NVETVI+FR+ TPLAV+  D+  LGRE PS RS +++++I +GA  YV  D +F ++G AAYTW I+YF+ IC EMTYGKK+ S +   ++ G   YTN L++ P FL  +L       S +E +  +  A +  W   G V+LV S ++G  IGY+ W+CR  VSAT+FT++GVINKF+T++LN+ IWDKHAS + +  L++CL+ GSFY+QAP+R
Sbjct:    5 PTKNEIVFAIVAYSLCSGTLLLLNKVVLHFIPLPALITLCQLVMAICIVYGIKTLKLAEVNEFDLEKLVPYAYYTIAFVSGIYANMRALQTCNVETVIVFRALTPLAVSFLDFACLGRESPSARSMISMISIVIGAAVYVSDDMEFAVEGTAAYTWVIIYFLAICAEMTYGKKLVSDVDL-TLSGSVLYTNTLAILP-FLFLFL-------STSELSVLTTQAPVESWPFLGWVVLVASGVVGAGIGYSGWNCRHKVSATSFTIIGVINKFLTVMLNIIIWDKHASTISLCGLIICLVAGSFYRQAPLR 304          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|1072235811|gb|OEU20539.1| (hypothetical protein FRACYDRAFT_274221 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 290.426 bits (742), Expect = 1.819e-92
Identity = 149/348 (42.82%), Postives = 212/348 (60.92%), Query Frame = 0
Query:   13 AVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAEVEREANAKITELDTVPLIVSTE 360
            +V +YS CSGT++L NKL +H++P PSLV   QLL+ ++++   ++  +I  DP++   VKPYLLY + F  GVYCNMR+L  SNVETVI+FR+ +P+ VA  D +FLGRE PS RS   L+T+ +GAYGY   D QF+  G  AY+W   Y + I  EM YGKKI   +   +  GP  YTN +   PM LL  + G++  F        +Q     +     +++LV+ S++GT IGY+ W CR +VSAT+FTL+GV+NK +T+LLN  IWD+HA P GI  L LC+ GG  YKQAPMR + + +  I   A   E + D   +V         + +   LI +++
Sbjct:   12 SVLAYSFCSGTLVLLNKLTLHFLPFPSLVVSFQLLACIILVYGAKFAGLINVDPIKWEYVKPYLLYILFFSTGVYCNMRSLNISNVETVIVFRALSPILVAFLDALFLGREWPSPRSWAGLITLVIGAYGYASFDEQFQTQGYGAYSWPTAYTIIIALEMAYGKKIVKSVPLATTSGPVIYTNLIGFVPMLLLANVGGEYSKFWDYFWAGDNQ-----RLPPLAILLLVLGSVVGTGIGYSGWWCRGVVSATSFTLIGVMNKCLTVLLNTLIWDQHAKPGGIFCLFLCIAGGMIYKQAPMRGSVKLVPGIT--AEDDEFKADISNDVHTTDQTTSKDEEMADLISNSD 352          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|219118261|ref|XP_002179909.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408962|gb|EEC48895.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 285.804 bits (730), Expect = 1.199e-90
Identity = 152/355 (42.82%), Postives = 213/355 (60.00%), Query Frame = 0
Query:    9 RVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAEVEREANAKITELDTVPLIVSTEGKK 363
             V L+V +YS+CSGT++L NKL +H++P PSLV   QLL+A++ I   +    +  D LE   V PYL Y + F +GV+CNM++L+ SNVETVI+FR+ +P  VA  D +FLGRE PS +S   L  IALGAYGY   D+QF+  GLAAY W  LY   I  EM YGK+I   +   ++ GP  YTN L + PM +   +  +++ F            E        V +L++    GT IGY  W CR  VSAT+FTL+GVINK +TILLNV IWD+HA P GI++L LCL+GGS Y+Q+P+R  + +L +    A+    +K+   + +  A       + V L+ + +G K
Sbjct:    6 EVFLSVVAYSLCSGTLVLLNKLTLHHLPYPSLVVSFQLLAALIFIYGAKHTGRLQVDALEWQYVLPYLFYILLFSVGVFCNMKSLSMSNVETVIVFRALSPCIVAFLDVLFLGREYPSLQSWTGLSLIALGAYGYASFDAQFQTQGLAAYAWPGLYLFIISLEMAYGKRIIQSVNLKTLSGPVLYTNLLGLPPMLMFAAMGHEYRSFVY------DHMVEQKPVGGVAVSLLLLGCAAGTGIGYAGWWCRGNVSATSFTLIGVINKCLTILLNVMIWDQHAPPKGILSLALCLVGGSIYRQSPLR--NNTLKTSSSVAVDDGDDKNGRDDSDSVATDAEDINEQVELLEAEKGMK 352          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|922859034|gb|KOO27101.1| (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 277.715 bits (709), Expect = 1.555e-87
Identity = 147/347 (42.36%), Postives = 211/347 (60.81%), Query Frame = 0
Query:    6 AHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMR----PTDRSLNSI---EFFAMGTELEKDELAEVEREANA 345
            + L +  A+  Y +CS  ML+ NKLA+H+VP+P  VT  Q  +   ++  ++   V+  D  E +KVK Y++Y ++F +G Y NM+ L+ +NVETVI+FRSCTPLAVA+ DY+F  R  PS RSC +LL I  GA  Y+ TD +F+++G AAY W ++++  + F++TYGK + SGI   S+W P  YTN LS+ P   L  + G+  +   A+    S  A  W         L  S  +G  I Y+ + C+ LVSATT+T+VGV+NK +T+++NV IWDKHAS  GI ALVLCL+GGS Y+Q+P+R     T R L  +   E     T+ + DE   V R   A
Sbjct:    7 SQLEMTTAIIFYCICSAGMLIVNKLAVHHVPMPGFVTSCQFSTCAALVYGMKLCGVLVADDFEWAKVKYYIIYVLSFSIGTYTNMKVLSMANVETVIVFRSCTPLAVAIFDYIFYNRAAPSARSCFSLLLITTGAIAYILTDREFQVNGWAAYYWVMIWWFVLVFQLTYGKFLVSGIPIASLWTPVLYTNSLSILPALGLCLVAGELDESRLAKVDLNS-AAYFW---------LGASCFIGMSISYSGFWCQQLVSATTYTVVGVMNKMLTVMVNVVIWDKHASSYGIGALVLCLVGGSLYQQSPLRDSPPETHRPLQRVREQEHMDEVTDEDGDEENSVLRPVGA 343          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|922868664|gb|KOO34987.1| (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 273.478 bits (698), Expect = 4.673e-86
Identity = 135/309 (43.69%), Postives = 198/309 (64.08%), Query Frame = 0
Query:   14 VASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQF------KMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTD 316
            VA Y  CSG ML+ NKLA+H++  P+ VTV+Q ++  V +++      +  D LE  KVK +++Y +AF  G + NM+ L  +NVET+I+FRSC P+ V++ DY+F  R LPS+RSCLA++ I LGA  YV  DS+       +    AAYTW  ++FV + F++TYGK + SG+   S+W P  YTN L++ P  L+G + GDF+  +  +            WT   + ML +S + G  I ++ + C+S+V+AT +T+VGV+NK +T+L+NV IWDKHASP GI AL +CL GGS Y+QAP+R  D
Sbjct:    9 VAFYCFCSGGMLVLNKLAVHHIHAPAFVTVVQFVATAVGVMAGWACGALELDTLEWRKVKHFVVYILAFSGGTWANMKVLMVANVETIIVFRSCAPICVSVLDYIFYNRALPSRRSCLAMVLIVLGASAYVALDSKSGQTLAERETQQAAYTWVAVWFVLLIFQLTYGKTLVSGLGLQSIWSPVLYTNALAIAPTALIGVVAGDFEALATTD------------WTLQALGMLALSCVAGIGISWSGFKCQSVVTATAYTVVGVMNKLLTVLINVLIWDKHASPGGIAALCVCLGGGSLYQQAPLRRQD 305          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|1210519178|dbj|GAX21958.1| (hypothetical protein FisN_16Hh051 [Fistulifera solaris])

HSP 1 Score: 268.085 bits (684), Expect = 4.862e-84
Identity = 154/339 (45.43%), Postives = 216/339 (63.72%), Query Frame = 0
Query:    7 HLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAE-VEREAN 344
            ++ V L+V +YS CSGT++L NKL +H +P PSLV   QL+ AV  I +      +P DPL+   V PYL Y IAF LGVYCNM++L+ SNVETV++FR+ +P  VA+ D +FLGRE PS+RS +AL  I LGA  Y   D+QF+  G +AY W   Y + ICFEM YGKKI   +   +  GP  YTN L + PM     L G++  F+AA G   SQ       + + +++L +  + GT IG++SW CR  VSAT+FTL+GV+NK +TILLN  IWD+HA+P G++ L LCL+GGS Y+Q+P+R    S ++        + E +E+ E +++  N
Sbjct:    4 NVEVTLSVLAYSACSGTLVLLNKLILHRLPYPSLVVSFQLVVAVAFIYAAHSAGRLPVDPLQWEYVVPYLYYIIAFSLGVYCNMKSLSLSNVETVVVFRALSPCLVAVLDVLFLGREYPSRRSWMALSLIVLGAVFYASFDAQFQTQGWSAYLWPTAYLLIICFEMCYGKKIIQSVDLKTKAGPVLYTNLLGLPPMLCFAALGGEYGQFAAAGGF--SQILS----SFSSMLLLFLGCVAGTGIGFSSWWCRDQVSATSFTLIGVLNKCLTILLNCLIWDQHAAPGGLLGLCLCLVGGSLYQQSPLRMKKESESA--------KPEDEEMVEFLDKNGN 328          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|922855570|gb|KOO24007.1| (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 276.559 bits (706), Expect = 2.086e-83
Identity = 137/306 (44.77%), Postives = 194/306 (63.40%), Query Frame = 0
Query:   17 YSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKIT-SGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNS 321
            +S+ S ++L+ NK+ +H +P+PS +++ Q ++A +  ++L  +  +P +P E  KVKPY +Y   FV  +YCNMRAL +SNVETVIIFR+C PL V   ++ F+GR LPS RSCLALLT+ +G  GYV TD  F+++G AAY+WA  YFV I  EM +GK I    + F S WGPT YTN +S+ PM  +G +    +   A E T          W+     +L +S L+G  I Y  +  R+LV+AT +T++GV NK  T+L+NV +WD+HAS  GI  L +CLIG S Y+QAPM   + S  S
Sbjct:   19 FSIASSSLLIVNKVCLHVLPLPSFISLAQFVTAALTSMALMALGYVPLEPWEWRKVKPYCIYVAMFVATIYCNMRALQYSNVETVIIFRACCPLVVCYLEWAFMGRALPSARSCLALLTLVIGVAGYVLTDKSFQLNGFAAYSWATAYFVIISVEMCWGKHIVGESLGFKSSWGPTLYTNTISIPPMLTIGLVT--HEPLKAYEAT----------WSLGACALLGLSCLIGVAISYLGFRARALVTATCYTVLGVANKMATVLINVLLWDQHASAAGIFFLTICLIGASTYEQAPMADHEASAGS 312          
BLAST of EWM26587.1 vs. NCBI_GenBank
Match: gi|1210514745|dbj|GAX26224.1| (hypothetical protein FisN_16Lh051 [Fistulifera solaris])

HSP 1 Score: 262.692 bits (670), Expect = 4.905e-82
Identity = 143/307 (46.58%), Postives = 201/307 (65.47%), Query Frame = 0
Query:    7 HLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMR 313
            ++ V L+V +YS CSGT++L NKL +H +P PSLV   QL+ AV  I +  +   +  DPL+   V PYL Y IAF LGVYCNM++L+ +NVETV++FR+ +P  VA+ D +FLGRE PS+RS  AL  I LGA  Y   D+QF+  G +AY W   Y + ICFEM YGKKI   +   +  GP  YTN L + PM     + G++  F++  G +        + + + +++L +  + GT IG++SW CR  VSAT+FTL+GV+NK +TILLN  IWD+HA+P G++ L LCL+GGS Y+Q+PMR
Sbjct:    4 NVEVTLSVLAYSACSGTLVLLNKLILHRLPYPSLVVSFQLVVAVAFIYAANFAGRLQVDPLQWEYVVPYLYYIIAFSLGVYCNMKSLSLANVETVVVFRAMSPCLVAVLDVLFLGREYPSRRSWGALSLIVLGAIFYASFDTQFQTQGWSAYRWPTAYLLIICFEMCYGKKIIQSVDLKTKAGPVLYTNLLGLPPMLCFAAMGGEYGQFASEGGVQ--------QISFSLMLLLFLGCVAGTGIGFSSWWCRDQVSATSFTLIGVLNKCLTILLNCLIWDQHAAPGGLLGLCLCLVGGSLYQQSPMR 302          
The following BLAST results are available for this feature:
BLAST of EWM26587.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108675|gb|EWM26587.1|0.000e+0100.00UAA transporter [Nannochloropsis gaditana][more]
gi|223998396|ref|XP_002288871.1|2.181e-9645.11predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|929770970|ref|XP_014160418.1|1.015e-9446.28hypothetical protein SARC_01346 [Sphaeroforma arct... [more]
gi|1072235811|gb|OEU20539.1|1.819e-9242.82hypothetical protein FRACYDRAFT_274221 [Fragilario... [more]
gi|219118261|ref|XP_002179909.1|1.199e-9042.82predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|922859034|gb|KOO27101.1|1.555e-8742.36drug metabolite transporter superfamily [Chrysochr... [more]
gi|922868664|gb|KOO34987.1|4.673e-8643.69drug metabolite transporter superfamily [Chrysochr... [more]
gi|1210519178|dbj|GAX21958.1|4.862e-8445.43hypothetical protein FisN_16Hh051 [Fistulifera sol... [more]
gi|922855570|gb|KOO24007.1|2.086e-8344.77drug metabolite transporter superfamily [Chrysochr... [more]
gi|1210514745|dbj|GAX26224.1|4.905e-8246.58hypothetical protein FisN_16Lh051 [Fistulifera sol... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4049rna4049Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications