EWM26585.1, cds4026 (CDS) Nannochloropsis gaditana

Overview
NameEWM26585.1
Unique Namecds4026
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:678702..680771 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26585.1
Productviolaxanthin de-epoxidase-related protein
Orig transcript idgnl|cribi|Naga_100001g81.8096.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:678702..680771 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0009507chloroplast
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|553186596|ref|XP_005854450.1| (violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana CCMP526] >gi|422294616|gb|EKU21916.1| violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana CCMP526] >gi|585108673|gb|EWM26585.1| violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana])

HSP 1 Score: 1413.28 bits (3657), Expect = 0.000e+0
Identity = 689/689 (100.00%), Postives = 689/689 (100.00%), Query Frame = 0
Query:    1 MRGKAPNQPSSLQREASTRRKRKPTSFSLAPQLSRSGITVLTLLLCVWACTAFFYAPLPFRRSPIAASSSSSPPPSSEASSALARYEKAHAFVAAARPRTPIFWMAPLIARVWKNYANSKRAASKDCSCGGLGGCGCAGGVSKRGDRTVLSMATSAPAKRTPRGQTTGRGRRVPPRPAAGSRPVHVVAVVPGHGARGKLEAPWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEIDPMAEARFMYPGWAGARTSQADDEGRVTLAPAAVL 689
            MRGKAPNQPSSLQREASTRRKRKPTSFSLAPQLSRSGITVLTLLLCVWACTAFFYAPLPFRRSPIAASSSSSPPPSSEASSALARYEKAHAFVAAARPRTPIFWMAPLIARVWKNYANSKRAASKDCSCGGLGGCGCAGGVSKRGDRTVLSMATSAPAKRTPRGQTTGRGRRVPPRPAAGSRPVHVVAVVPGHGARGKLEAPWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEIDPMAEARFMYPGWAGARTSQADDEGRVTLAPAAVL
Sbjct:    1 MRGKAPNQPSSLQREASTRRKRKPTSFSLAPQLSRSGITVLTLLLCVWACTAFFYAPLPFRRSPIAASSSSSPPPSSEASSALARYEKAHAFVAAARPRTPIFWMAPLIARVWKNYANSKRAASKDCSCGGLGGCGCAGGVSKRGDRTVLSMATSAPAKRTPRGQTTGRGRRVPPRPAAGSRPVHVVAVVPGHGARGKLEAPWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEIDPMAEARFMYPGWAGARTSQADDEGRVTLAPAAVL 689          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|873230092|emb|CEM11601.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 390.578 bits (1002), Expect = 4.302e-124
Identity = 222/515 (43.11%), Postives = 294/515 (57.09%), Query Frame = 0
Query:  186 VVAVVPGHGARG----------KLEAPWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQV----------PHLIALDSCPELAQKSRIGPARPYG--PLAGF----------WKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEIL--KPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYR-KGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAE--PCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI----DPMAE 659
            VV +VP  G  G          K +  W +V+QHM  R+ +  P F L + TE+ +                         SSP++ PS  +A+ S   + +  L+V + +    LK  +             P L  + S     + S +   +  G  P+  F          W       + KR+L++       W+R  SDD+LY + V+I++ + DIP V   L  K +    L+CM  NC  QII+C ++PAC+ AL CL  C  NDQVC YRCIV +ES  FE F+LCILQKHNCL N A IP+ P P PL  F+G+PL++E+AE+I  G LGQ     PWSWKV+AG NPAYDFFP+QH  +YR K  A WY PVFRV T+DGR VWRRR YRV+R   PGTF++SVLDNGVTS+E+W ILD ADD SW +F+YSGAA+ AGQ Y GA++ S  G WP  +    + RI AALD+AG+K WEL+ V +DGS+GAPL +     PMAE
Sbjct:  101 VVCIVPAAGRPGHKSHFLTKPFKEQVEWPDVLQHMAERLTWSSPNFKLKIFTEDVL-------------------------SSPTA-PSNLSAALSNA-NILLTLNVHDRQALTNLKAIVTNTQMGSRTNESAPFLPTILSFGLGGRSSPVESLQRMGGTPVGSFVRKVSARVAPWSRVSRALKTKRVLDIL------WQRRSSDDLLYFMEVLIDSYVADIPLVKSQLGMKEMGSGVLKCMWTNCQDQIIECMKSPACRQALFCLTNCPLNDQVCTYRCIVTHESPAFEAFSLCILQKHNCLNNSAPIPVYPRPEPLRTFKGKPLTYESAEDIYVGWLGQ----DPWSWKVVAGKNPAYDFFPNQHQIFYRGKRSAFWYDPVFRVTTYDGRVVWRRRHYRVKRAAEPGTFWFSVLDNGVTSNEYWTILDCADDFSWAIFHYSGAASVAGQQYRGALVVSRDGAWPKIDGMETRRRIEAALDKAGVKTWELYEVVNDGSEGAPLGLPDSGAPMAE 578          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|1035906361|gb|OAY35959.1| (hypothetical protein MANES_12G144300 [Manihot esculenta])

HSP 1 Score: 383.645 bits (984), Expect = 5.299e-122
Identity = 206/478 (43.10%), Postives = 277/478 (57.95%), Query Frame = 0
Query:  183 PVHVVAVVPGHGARGKLE-APWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQK--SRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYR---KGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI 654
            PV +VAVV G+G+   L+ APW EVM H  +R+++VD  + + V T+               L  +                           D +  + V N +    ++     VP++I  DS P L  K           G L G      +P + K  L++ +TV   W R ++DD+ + +LV+INA +  +P +   L+      L CM+ NCG QI++C  +P C+ AL CL  C+P DQVC YRCI  YES   E F+LC+LQK+NCL+  A IP  P   P+  FRGE L HE AE++  G LG L     WSW+V+AG NPAYD FP Q+  +YR   KG + WY+PVF+V T +GR VWRRR YRV+RGKVPGTF++SVLDNGV S+EFW  +D +DD SW LF+YSGAA AAGQSYTGA+L SP G +P+ E  + R+++ALD+ GIKEWELF V +    G PL I
Sbjct:   78 PVKIVAVV-GNGSLSPLKSAPWEEVMLHTAKRLKWVDEGYQMIVFTDNVCQCNDKTKYLEKELSHA---------------------------DVLLIVAVSNQESVKWIQMNSQTVPNIICFDSSPNLENKLGGSYVQNEINGTLCGKIIGVSLPNKIKESLQVVKTVSEAWDRHNADDIRFCLLVIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQIVNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDARIPERPYVPPMVKFRGEELCHETAEDLFVGWLGTLD----WSWRVVAGQNPAYDQFPCQYQLFYRGKAKG-SFWYEPVFQVQTLEGRMVWRRRKYRVKRGKVPGTFHFSVLDNGVVSNEFWTTVDVSDDFSWGLFHYSGAARAAGQSYTGAVLVSPDGAYPN-EKERERMVSALDKCGIKEWELFTVDNCSCQGPPLGI 520          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|1117391631|ref|XP_019463559.1| (PREDICTED: uncharacterized protein LOC109362307 [Lupinus angustifolius] >gi|1102701208|gb|OIW00449.1| hypothetical protein TanjilG_05799 [Lupinus angustifolius])

HSP 1 Score: 379.793 bits (974), Expect = 1.094e-120
Identity = 210/490 (42.86%), Postives = 290/490 (59.18%), Query Frame = 0
Query:  173 VPPRPAAGSRPVHVVAVVPGHGARGKLEA-PWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIG----PARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYR---KGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI 654
            V P   +   PV +VAVV GH A   L++ PW +VM H  +R+++VD  + L V T+E I   G  A+          L  A                     D +  + V N +    +      + ++I  DS PEL  K+++G    P +  G + G         + K   E+ +TV   W R +SDD+ + +L++INA +  +P +   L+      L CMLGNCG Q+++C  +P C+ AL CL +C+P DQVC YRCI  YES   E F+LC+LQK+NCL+  A IP  P   P+  FR + L+ E +E++  G LG+L+    WSW+V+AG NPAYD FP Q+  +YR   KG + WY+PVF+V TF+G+ VWRRR YRV+RGK+PGTFY+SVLDNGV S+EFW I+D A+DLSW LF+Y GAA AAGQSYTGA+L SP G +P+A     +++AAL+R GIKEWELF V +     APL I
Sbjct:   61 VTPENQSPDAPVRMVAVV-GHEAVSPLKSQPWEQVMLHTAKRLKWVDEGYELLVFTDECIQSDGKKAMRL-----QEELLKA---------------------DILVIVAVTNTESTKWININGNDIENVICFDSSPEL--KNKLGGYDVPTQVRGSIFGKVLGNSQFDKTKESYEVVQTVSEAWNRHNSDDIRFCLLLLINAYIRPVPVLKN-LRAKGFSTLNCMLGNCGRQVLNCLLDPNCRKALQCLNKCSPVDQVCNYRCIASYESAYLEAFSLCVLQKNNCLELEAEIPDKPYVPPMDKFRAQDLTFELSEDLFVGWLGKLE----WSWRVVAGQNPAYDQFPCQYQLFYRGKAKG-SFWYEPVFQVKTFEGQLVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVANDLSWGLFHYHGAARAAGQSYTGAVLVSPDGTFPNARE-MTKVVAALERCGIKEWELFTVDNCSCIDAPLGI 514          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|1150143518|ref|XP_020215624.1| (uncharacterized protein LOC109799463 [Cajanus cajan])

HSP 1 Score: 378.637 bits (971), Expect = 2.518e-120
Identity = 213/489 (43.56%), Postives = 287/489 (58.69%), Query Frame = 0
Query:  174 PPRPAAGSRPVHVVAVVPGHGARGKLE-APWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIG----PARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYR---KGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI 654
            PP P     PV +VAVV GHGA   L+ A W +VM H  +R+++VD  + L V T+E I+  G      + +     L  A                     D +  + V N +    +      V ++I LDS P+   K+++G    P      + G +       E K   E+ +TV   W R +SDD+ + +LV+INA +  +P +   L+      L CML NCG Q+++C  +P C+ AL CL QC+P DQVC YRCI  YES   E F+LC+LQK+NCL+  A IP  P   P+  FRG+ +SHE AE++  G LG LQ    WSW+V+AG NPAYD FP Q+  +YR   KG + WY+PVF+V T +G+ VWRRR YRV+RGKV GTFY+SVLDNGV S+EFW I+D AD+LSW LF+Y GAA AAGQSYTGA+L SP G +PS    + ++ AALD+  IKEWEL++V +     APL I
Sbjct:   66 PPPP-----PVRMVAVV-GHGASSPLKSASWEQVMLHTAKRLKWVDEGYELLVFTDECIISNG-----QMSMRLQRELLNA---------------------DILVIVAVTNKESVEWININSKTVQNVIFLDSSPD--SKNKLGGYDVPGEVRRSIFGNFFGNSQSDEAKESYEVLQTVSEAWDRHNSDDIRFCLLVLINAYIRPVPVLKN-LRAKGFSTLNCMLRNCGRQVLNCLLDPNCRKALQCLNQCSPVDQVCNYRCIASYESGNLEAFSLCVLQKNNCLELEAEIPDKPCVPPMIKFRGQNMSHEMAEDLFVGWLGSLQ----WSWRVVAGQNPAYDQFPCQYQLFYRGKAKG-SFWYEPVFQVKTLEGQMVWRRRKYRVKRGKVAGTFYFSVLDNGVVSNEFWTIVDVADNLSWGLFHYHGAARAAGQSYTGAVLVSPDGAFPSDRE-RTKVDAALDKCEIKEWELYSVDNCSCKDAPLGI 513          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|1191679751|gb|OTG31714.1| (putative violaxanthin de-epoxidase-related protein [Helianthus annuus])

HSP 1 Score: 378.637 bits (971), Expect = 2.549e-120
Identity = 209/513 (40.74%), Postives = 290/513 (56.53%), Query Frame = 0
Query:  144 RGDRTVLSMATSAPAKRTPRGQTTGRGRRVPPRPAAGSRPVHVVAVVPGHGARGKLE-APWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQA---LWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPL 652
            R   TV  + T +   +T  G  +         P +    V +VAVV G GA   L+ A W +VM H   R++++D  + + V T+                            S+P+        S + +   +  + V   +    ++ Y   +P++I  DS P L  K   G        +  +  F   T+  +  EL ET+   W R +SDD+ + +L++INA +  +P +   L+      L CM+ NCG Q+++C  +P C+ AL CL QC+P DQVC Y+CI  YES   E+F+LC+LQKHNCL   A IP  P   P+ +FRG+ LSHE AE++  G LG L+    WSW+VIAG NPAYD FP Q+  +YR G+A    WY+PVF+V T DG+ VWRRR YRV+RGKV GTFY+SVLDNGV S+E+W I+D ++D SW LF+YSGAA  AGQSYTGA+L S  GE+P+ E  K R+ +ALDR  IKEWELF V +   +GAPL
Sbjct:   37 RHKFTVPKLRTVSSVLQTNDG-VSSDSDSCSTEPRSFRNDVRIVAVV-GEGAVSPLKSASWLDVMSHTAERLKWIDDKYEMLVFTDN------------------------ISKSNPNVQNLQKLLSTANI---LLIVSVTKQEAVEYIQRYSRNIPNIICFDSSPALENKLG-GSFVQVEQKSSIFSKFDKKTKETK--ELAETISEAWVRNNSDDIRFCLLIIINAYIKPVPVLKN-LRAQGFSTLNCMVKNCGRQVLNCLLDPNCRKALQCLNQCSPVDQVCNYQCIASYESPILEEFSLCVLQKHNCLDLDAKIPEKPYVPPMVNFRGQVLSHEIAEDLFIGWLGNLE----WSWRVIAGQNPAYDQFPCQNQLFYR-GKARGSFWYEPVFQVKTLDGKLVWRRRKYRVKRGKVAGTFYFSVLDNGVVSNEYWTIVDVSEDFSWGLFHYSGAARVAGQSYTGAVLVSRDGEYPN-EMQKDRLYSALDRCCIKEWELFEVDNCSCEGAPL 510          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|1130850884|dbj|GAV68971.1| (LOW QUALITY PROTEIN: hypothetical protein CFOL_v3_12473, partial [Cephalotus follicularis])

HSP 1 Score: 378.637 bits (971), Expect = 2.678e-120
Identity = 201/479 (41.96%), Postives = 281/479 (58.66%), Query Frame = 0
Query:  183 PVHVVAVVPGHGARGKLE-APWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAG--FWKAFPVPTERK--RLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYR--KGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI 654
            PV +VA+V G G    L+ A W +VM H  +R+++VD  + + V T+  +L      +                  +     S A        D +  + VKN    + ++     +P++I  DS P LA K  +G    +  + G  F K   +   +K    +E+ +TV G W R +SDDV + +LV+INA +  +P +   L+      L CM+ NCG QI++C  +P C+ A+ CL +C P DQVC YRCI  YES + E F+LC+LQK NCL+ +A IP  P   P+  FRG+ L HE +E++  G LG+L     WSW+V+AG NPAYD FP Q+  +YR    ++ WY+PVF+V T +G+ VWRRR YRV+RGK PGTFY+SVLDNGV S+EFW I+D +DD SW LFYYSGAA  AGQSY+GA+L SP G +P  E    +I++ALD+ GIKEWEL+ V +      PL I
Sbjct:   74 PVRIVALV-GEGTVSPLKGATWRDVMLHTAKRLKWVDEGYEMLVFTDNLVLSNDGTDV------------------NIQKELSRA--------DILVIVAVKNQNSVNWIQTNSGNIPNMICFDSSPNLANK--LG-GSVHSEIKGNIFSKIIGMSQSKKSNETMEVVQTVYGAWDRHNSDDVRFLLLVIINAYIKPVPILQN-LRSKGFSTLNCMVKNCGPQILNCLLDPNCRKAIQCLNKCNPVDQVCNYRCIASYESPKLEAFSLCVLQKKNCLEMNAKIPEKPYVPPMVKFRGKDLCHETSEDLFVGWLGRLD----WSWRVVAGQNPAYDQFPCQYQLFYRGKAKRSFWYEPVFQVKTLEGKMVWRRRKYRVKRGKTPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFYYSGAARVAGQSYSGAVLVSPDGAYPK-ESESGKIVSALDKCGIKEWELYTVDNCSCQNPPLGI 516          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|743823402|ref|XP_011021952.1| (PREDICTED: violaxanthin de-epoxidase, chloroplastic-like [Populus euphratica])

HSP 1 Score: 377.481 bits (968), Expect = 1.213e-119
Identity = 200/478 (41.84%), Postives = 282/478 (59.00%), Query Frame = 0
Query:  183 PVHVVAVVPGHGARGKLE-APWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAG--FWKAFPVPTERK--RLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYR---KGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPL 652
            PV +V +V G G+   L+ APW EVM H  +R+++VD  + + V T++                              S   +     A    D +  + V + +    ++     VP+++  DS P L   S++G +      +G  F K F +   +K    +++ +TV   WKR +SDD+ + +L++INA +  +P +   L+      L CM+ NCG QI++C  +P C+ AL CL +C+P DQVC YRCI  YES   E F+LC+LQK+NCL+  A IP  P   P++ FRGE LSHE AE++  G LG L     WSW+VIAG NPAYD FP Q+  +YR   KG + WY+PVF+V T +G+ VWRRR YRV+RGK+PGTFY+SVLDNGV S+EFW I+D +DD SW LF+Y+GAA  AGQ+YTGA+L SP G +P  +  K R+ +AL++ GIKEWELF V +      PL
Sbjct:   77 PVRIVTIV-GAGSISPLKRAPWEEVMLHTAQRLKWVDEGYDMLVFTDDLY---------------------------QSKDQTEILLKALSCADILLIVAVTDQESVKWIETESKNVPNIVCFDSSPNLV--SKLGGSYVQNETSGTLFAKTFGISLSKKASDSMDVVQTVSEAWKRHNSDDIRFCLLIIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPDCRKALQCLNKCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKIPEKPFVPPMARFRGEDLSHETAEDLFVGWLGSLD----WSWRVIAGQNPAYDQFPCQYQLFYRGKVKG-SFWYEPVFQVKTLEGKVVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFHYNGAARVAGQAYTGAVLVSPDGAYPDEKESK-RLASALEKCGIKEWELFTVDNCSCQDPPL 517          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|460383527|ref|XP_004237473.1| (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Solanum lycopersicum])

HSP 1 Score: 375.555 bits (963), Expect = 5.145e-119
Identity = 208/500 (41.60%), Postives = 287/500 (57.40%), Query Frame = 0
Query:  165 QTTGRGRRV----PPRPAAGSRPVHVVAVVPGHGARGKLEA-PWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQK--SRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQA---LWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI 654
            + TG GR V      +      PV +V +V G G+   L++ PW +VM H   R+++VD  F + V ++  +      A  H+    S+ L  A                     D +  + V      + ++     VP++I  DS  EL  K        +  G +      F    +    +E+  TV   W+R +SDD+ + +LV+INA +  +  +   L+      L CM+ NCG QI++C  +P C+ AL CL  C+P DQVC YRCI  YES+  E+F+LC+LQK+NCL+  A IP  P   P++ FRGE LS E AE++  G LG L+    WSW+V+AG NPAYD FP Q+  +YR G+A    WY+PVF+V T +G  VWRRR YRV+RGKV GTF++SVLDNGV S+EFW I+D +DDLSW LF+Y GAA  AGQSYTGA+L SP G++P AE  K R+++ALD  GIKEWELFNV +   + APL I
Sbjct:   49 KITGGGRIVGAVEMDKAEEKRGPVRIVGIV-GEGSVSPLKSTPWLDVMLHTAERLKWVDEEFEMIVFSDNFVKSEDETA-NHV----SNELDHA---------------------DILVVVAVTKEGSVNWIQSNSLNVPNIICFDSSMELRNKLGGSFVETKKRGDIFSSLLPFSQSKKLDESVEITRTVFDAWERHNSDDIRFCLLVIINAYITPVSTLKN-LRAKGFSTLNCMVTNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESKYLEEFSLCVLQKNNCLELDAKIPEKPYVTPMAEFRGEKLSSEIAEDLLVGWLGTLE----WSWRVVAGQNPAYDQFPCQYQLFYR-GKARGSFWYEPVFQVRTLEGDLVWRRRKYRVKRGKVTGTFHFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGAARVAGQSYTGAVLVSPDGQYP-AEKEKQRLISALDSCGIKEWELFNVDNCSCENAPLGI 514          
BLAST of EWM26585.1 vs. NCBI_GenBank
Match: gi|970024997|ref|XP_015073809.1| (PREDICTED: uncharacterized protein LOC107017997 [Solanum pennellii])

HSP 1 Score: 375.555 bits (963), Expect = 6.622e-119
Identity = 209/500 (41.80%), Postives = 288/500 (57.60%), Query Frame = 0
Query:  165 QTTGRGRRV----PPRPAAGSRPVHVVAVVPGHGARGKLEA-PWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQK--SRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQA---LWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSAEPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEI 654
            + TG GR V      +      PV +V +V G G+   L++ PW +VM H   R+++VD  F + V ++  +      A  H+    S+ L  A                     D +  + V+     + ++     VP++I  DS  EL  K        +  G +      F    +    +E+ +TV   W+R +SDD+ + +LV+INA +  + A+   L+      L CM+ NCG QI++C  +P C+ AL CL  C+P DQVC YRCI  YES+  E+F+LC+LQK+NCL+  A IP  P   P++ FRGE LS E AE++  G LG L+    WSW+V+AG NPAYD FP Q+  +YR G+A    WY+PVF+V T  G  VWRRR YRV+RGKV GTF++SVLDNGV S+EFW I+D  DDLSW LF+Y GAA  AGQSYTGA+L SP G++P AE  K R+++ALD  GIKEWELFNV +   + APL I
Sbjct:   52 KITGGGRIVGAVEMDKAEKKRGPVRIVGIV-GEGSVSPLKSTPWLDVMLHTAERLKWVDEEFEMIVFSDNFVKSEDETA-NHV----SNELDHA---------------------DILVVVAVRKEGSVNWIQSNSQNVPNIICFDSSMELRNKLGGSFVETKKRGDIFSSLLPFSQSKKLDESVEITQTVFDAWERHNSDDIRFCLLVIINAYITPVSALKN-LRAKGFSTLNCMVTNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESKYLEEFSLCVLQKNNCLELDAKIPEKPYVTPMAEFRGEKLSSEIAEDLFVGWLGTLE----WSWRVVAGQNPAYDQFPCQYQLFYR-GKARGSFWYEPVFQVRTLLGDLVWRRRKYRVKRGKVTGTFHFSVLDNGVVSNEFWTIVDVCDDLSWGLFHYHGAARVAGQSYTGAVLVSPDGQYP-AEKEKQRLISALDSCGIKEWELFNVDNCSCENAPLGI 517          
The following BLAST results are available for this feature:
BLAST of EWM26585.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553186596|ref|XP_005854450.1|0.000e+0100.00violaxanthin de-epoxidase-related protein [Nannoch... [more]
gi|873230092|emb|CEM11601.1|4.302e-12443.11unnamed protein product [Vitrella brassicaformis C... [more]
gi|1035906361|gb|OAY35959.1|5.299e-12243.10hypothetical protein MANES_12G144300 [Manihot escu... [more]
gi|1117391631|ref|XP_019463559.1|1.094e-12042.86PREDICTED: uncharacterized protein LOC109362307 [L... [more]
gi|1150143518|ref|XP_020215624.1|2.518e-12043.56uncharacterized protein LOC109799463 [Cajanus caja... [more]
gi|1191679751|gb|OTG31714.1|2.549e-12040.74putative violaxanthin de-epoxidase-related protein... [more]
gi|1130850884|dbj|GAV68971.1|2.678e-12041.96LOW QUALITY PROTEIN: hypothetical protein CFOL_v3_... [more]
gi|743823402|ref|XP_011021952.1|1.213e-11941.84PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
gi|460383527|ref|XP_004237473.1|5.145e-11941.60PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
gi|970024997|ref|XP_015073809.1|6.622e-11941.80PREDICTED: uncharacterized protein LOC107017997 [S... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4036rna4036Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications