EWM26658.1, cds4023 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|553186582|ref|XP_005854446.1| (triosephosphate isomerase (TIM) [Nannochloropsis gaditana CCMP526] >gi|422294612|gb|EKU21912.1| triosephosphate isomerase (TIM) [Nannochloropsis gaditana CCMP526] >gi|585108746|gb|EWM26658.1| triosephosphate isomerase [Nannochloropsis gaditana]) HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MSTSKAWAEYLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKSP 272 MSTSKAWAEYLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKSP Sbjct: 1 MSTSKAWAEYLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKSP 272
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|298712036|emb|CBJ32973.1| (Triosephosphate isomerase [Ectocarpus siliculosus]) HSP 1 Score: 302.368 bits (773), Expect = 3.536e-100 Identity = 149/253 (58.89%), Postives = 184/253 (72.73%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVL-SQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVK 270 +++LIGGNWK NGT A +V++LN+GG P AEVV+APP+ L VKD +RPD+ VS QN +PGA+TGEL A ++KDFG+ WVI GHSERR GFG GES +++A K+KVA+D GL+V+ C+GE L REA +T E+VL + A L DWS+VV+AYEPVWAIGTG A+P QAQEVH +IRA+V EKV A LRIIYGGSVK S+A L PDIDGFLVGGASL DFV II+AV+ Sbjct: 3 RKFLIGGNWKCNGTRENVAALVEVLNEGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVRPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCAGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLEEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVGEKVSPAVAESLRIIYGGSVKSSNAAELATCPDIDGFLVGGASLKPDFVDIIKAVE 255
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|873228794|emb|CEM14871.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 301.212 bits (770), Expect = 7.159e-99 Identity = 148/263 (56.27%), Postives = 189/263 (71.86%), Query Frame = 0 Query: 10 YLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKSP 272 ++A VP IGGNWK NGT A +VK+LN+GG P + EVV+APPA +GYV+D++R D++VS QN L GA+TGEL ++KDFG+NW I GHSERREGFG GES E+VA KTK A++ GL V+ CVGEK E+REAGKT +V+ Q+ A+ ++L+ DWS VV+AYEPVWAIGTG ATP+QAQ+ IR ++ + + + AA RIIYGGSVK +A L +PDIDGFLVGGASLTSDF+ II A +P Sbjct: 56 WMADRVP-----FIGGNWKCNGTKKSVADLVKLLNEGGNFPDKVEVVVAPPALHVGYVQDSIRKDISVSTQNVGLPKAYGAYTGELSGNMIKDFGVNWCITGHSERREGFGMAGESSELVAKKTKAALEQGLKVIPCVGEKKEEREAGKTMDVISEQMKALVAELSPSDWSNVVVAYEPVWAIGTGLTATPQQAQDTQADIRKWMADNISPEVAASTRIIYGGSVKAGNAAELFAEPDIDGFLVGGASLTSDFIAIINASTTP 313
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|219122872|ref|XP_002181761.1| (isomerase triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407037|gb|EEC46975.1| isomerase triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 280.796 bits (717), Expect = 1.398e-91 Identity = 134/250 (53.60%), Postives = 173/250 (69.20%), Query Frame = 0 Query: 18 QKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIR 267 +++YL+ GNWK NGTLA +VK N+ G IP EV I P+ L + +LR D+ + AQ+ + K GAFTGE+ A +KD G +WVIIGHSERREGF PGE+ ++ A KT+VA+DAGL VM C+GEK EQRE G T +V SQL +A+ L DWS + IAYEPVWAIGTG ATPE AQE H SIR ++ + V A A +RI YGGS+KG++A L+ +PDIDG L+GGASLT+DF ++ Sbjct: 15 ERKYLVAGNWKCNGTLASNEELVKTFNEAGPIPSNVEVAICCPSVYLPQLLSSLRDDIQIGAQDCGVNDKNGAFTGEIGAFQIKDIGCDWVIIGHSERREGFEMPGETPDLCAKKTRVAIDAGLKVMFCIGEKKEQREDGTTMDVCASQLEPLAAVLTESDWSSIAIAYEPVWAIGTGLTATPEMAQETHASIRDWISQNVSADVAGKVRIQYGGSMKGANAKDLLEQPDIDGGLIGGASLTADFFNVVN 264
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|224011591|ref|XP_002295570.1| (triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335] >gi|209583601|gb|ACI64287.1| triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 280.411 bits (716), Expect = 2.698e-91 Identity = 144/264 (54.55%), Postives = 180/264 (68.18%), Query Frame = 0 Query: 12 ARGVPP---QKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKSP 272 ++G P +++YLIGGNWK NGT+A I+ N G IP AEVVI PA + +LR D+ ++AQN +LT GA+TGE+ A LKD G+ WVI+GHSERREGFG GE E+VA KTK A++ GL VM C+GEK E+REAG T +V SQL A L++EDW+ V IAYEPVWAIGTG ATPE AQE H +IRA+V E VG A +RI YGGS+KG++A L+ + DIDG L+GGASLT DF + V SP Sbjct: 14 SKGTPAPEGERKYLIGGNWKCNGTIASLEKIISEFNAAGPIPANAEVVIGCPAMHIPIALMSLRDDIEIAAQNCSLT-GCGAYTGEIAASQLKDMGVTWVILGHSERREGFGMAGEDSELVAKKTKKAIEEGLKVMFCIGEKKEEREAGTTMDVCASQLKPAADILSKEDWANVSIAYEPVWAIGTGLTATPEMAQETHANIRAWVAENVGQDVADAVRIQYGGSMKGANAADLLAQADIDGGLIGGASLTMDFFNCVNGVPSP 276
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|1210511487|dbj|GAX29301.1| (triosephosphate isomerase [Fistulifera solaris]) HSP 1 Score: 275.789 bits (704), Expect = 1.382e-89 Identity = 140/252 (55.56%), Postives = 169/252 (67.06%), Query Frame = 0 Query: 18 QKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAV 269 Q+ YLIGGNWK NGTLA+ ++ N+ G IP EV I L + LR D+AV AQ+ A+ KPGA+TGE+ A LKD G WVIIGHSERREGFG GE E+ A K KVAVDAGL VM +GEK E+REAG T V SQL +A L DW + IAYEPVWAIGTG ATPE AQE HE+IR +V + VGA A +RI YGGS+KG++A L+ +PDIDG L+GGASL +DF ++ V Sbjct: 17 QRTYLIGGNWKCNGTLAENEALINTFNEAGPIPDNVEVAICCTYVHLPQLLATLREDIAVGAQDCAVYEKPGAYTGEVSAAQLKDLGCVWVIIGHSERREGFGMAGEPAELCAKKCKVAVDAGLKVMFAIGEKKEEREAGTTMAVCASQLEPLAKVLTAADWDNIAIAYEPVWAIGTGLTATPEMAQETHEAIRKWVADNVGADIAKKVRIQYGGSMKGANAQELLAQPDIDGGLIGGASLQADFFNVVNGV 268
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|1210531882|dbj|GAX09569.1| (triosephosphate isomerase [Fistulifera solaris]) HSP 1 Score: 275.789 bits (704), Expect = 2.338e-89 Identity = 140/252 (55.56%), Postives = 169/252 (67.06%), Query Frame = 0 Query: 18 QKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAV 269 ++ YLIGGNWK NGTLA+ ++ N+ G IP EV I L + LR D+AV AQ+ A+ KPGA+TGE+ A LKD G WVIIGHSERREGFG GE E+ A K KVAVDAGL VM +GEK E+REAG T V SQL +A L DW + IAYEPVWAIGTG ATPE AQE HE+IR +V + VGA A LRI YGGS+KG++A L+ +PDIDG L+GGASL +DF ++ V Sbjct: 28 ERTYLIGGNWKCNGTLAENEALISTFNEAGPIPDNVEVAICCTYVHLPQLLATLREDIAVGAQDCAVYEKPGAYTGEVSAAQLKDLGCVWVIIGHSERREGFGMAGEPAELCAKKCKVAVDAGLKVMFAIGEKKEEREAGTTMAVCASQLEPLAKVLTAADWDNIAIAYEPVWAIGTGLTATPEMAQETHEAIRKWVADNVGADIAKKLRIQYGGSMKGANAQELLAQPDIDGGLIGGASLQADFFNVVNGV 279
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|732855179|gb|KHJ85713.1| (triose-phosphate isomerase [Oesophagostomum dentatum]) HSP 1 Score: 273.478 bits (698), Expect = 5.649e-89 Identity = 142/252 (56.35%), Postives = 175/252 (69.44%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVK 270 +++ +GGNWK NG+ + GI LNQ +P + EVV+APPA L YVKD L+ V VSAQN K GAFTGE+ +LKD G++WVIIGHSERR FG ESD++VA K A++ ++V+ C+GEK+E+REAGKT EV Q+ A+ K + DW+ +VIAYEPVWAIGTGK ATPEQAQEVH IR F+KEKV A A RIIYGGSV + L KPDIDGFLVGGASL DF+ I+ A K Sbjct: 3 RKFFVGGNWKMNGSKSSIDGICVFLNQSAGVP-DVEVVVAPPAPYLTYVKDQLKNSVKVSAQNCYKVPK-GAFTGEISPEMLKDLGIDWVIIGHSERRHIFG---ESDQLVAEKVVHALECKVNVIFCIGEKIEEREAGKTKEVNFRQMQALIDK--KVDWTNIVIAYEPVWAIGTGKTATPEQAQEVHNWIREFLKEKVSADVAQKTRIIYGGSVTAENCVELGKKPDIDGFLVGGASLKPDFIKIVNARK 247
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|510860523|gb|EPB75980.1| (triose-phosphate isomerase [Ancylostoma ceylanicum]) HSP 1 Score: 271.166 bits (692), Expect = 7.559e-88 Identity = 141/252 (55.95%), Postives = 176/252 (69.84%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVK 270 +++ +GGNWK NG + GI LNQ +P + +V++APPA L YVKD+L+ V VSAQN K GAFTGE+ +LKD G+ WVI+GHSERR FG ESD+++A KT A++ ++V+ CVGEKLE+REAGKT EV QL A+ K + DW+ +VIAYEPVWAIGTGK ATP+QAQEVH IR F+K+KV A AA RIIYGGSV + L KPDIDGFLVGGASL DF+ I+ A K Sbjct: 20 RKFFVGGNWKMNGDKSSIDGICVFLNQSAGVP-DVDVIVAPPAPYLTYVKDHLKNSVKVSAQNCYKVPK-GAFTGEVSPSMLKDLGIEWVILGHSERRHIFG---ESDQLIAEKTVHALENKINVIFCVGEKLEEREAGKTKEVNFRQLQALVDK--KVDWTNIVIAYEPVWAIGTGKTATPDQAQEVHLWIREFLKDKVSADVAAKTRIIYGGSVTAENCVELGKKPDIDGFLVGGASLKPDFIKIVNARK 264
BLAST of EWM26658.1 vs. NCBI_GenBank
Match: gi|762143735|ref|XP_011455124.1| (PREDICTED: triosephosphate isomerase [Crassostrea gigas]) HSP 1 Score: 268.855 bits (686), Expect = 4.404e-87 Identity = 134/251 (53.39%), Postives = 168/251 (66.93%), Query Frame = 0 Query: 18 QKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRA 268 +++ +GGNWK NG GI L G P EVV++PPA LGY + + P + V+AQN GAFTG++ A ++KD G WVI+GHSERR FG ESD+++ KTK A+ G+ V+AC+GEKLE+REAGKT EVV Q AI + + W VV+AYEPVWAIGTGK ATPEQAQEVHE +RA++ E+V + AA +RIIYGGSV + L KPDIDGFLVGGASL DFV I+ A Sbjct: 3 NRKFFVGGNWKMNGNKQSIDGIADFLKTGPLDP-NTEVVVSPPACYLGYTRQKVDPKIGVAAQN-CYKVSSGAFTGDISADMIKDLGCEWVILGHSERRNVFG---ESDQLIGEKTKYALSKGMKVIACIGEKLEEREAGKTEEVVFRQTQAIIENITADQWPNVVLAYEPVWAIGTGKTATPEQAQEVHEKLRAWLAERVSKEVAASVRIIYGGSVNAGNCKDLGAKPDIDGFLVGGASLKPDFVQIVNA 248 The following BLAST results are available for this feature:
BLAST of EWM26658.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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