EWM26707.1, cds4015 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26707.1 vs. NCBI_GenBank
Match: gi|585108795|gb|EWM26707.1| (hypothetical protein Naga_100001g92 [Nannochloropsis gaditana]) HSP 1 Score: 410.994 bits (1055), Expect = 3.996e-145 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
Query: 1 MRAHAVLLLAMATAVQAFWPSFIAVKQSFCRRKEALTLCAFKGTADRRDHIRSQVALGGLGALLLAANPPLALADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETLDNPETIKAFNQYVEDSLAAALALYGSSTRIGELPDPKSRTVEKEAEDFVKEVNAMAKGGDVKASYEGAKTALAAYLAGTKLEPLSDPVYKDMDR 202
MRAHAVLLLAMATAVQAFWPSFIAVKQSFCRRKEALTLCAFKGTADRRDHIRSQVALGGLGALLLAANPPLALADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETLDNPETIKAFNQYVEDSLAAALALYGSSTRIGELPDPKSRTVEKEAEDFVKEVNAMAKGGDVKASYEGAKTALAAYLAGTKLEPLSDPVYKDMDR
Sbjct: 1 MRAHAVLLLAMATAVQAFWPSFIAVKQSFCRRKEALTLCAFKGTADRRDHIRSQVALGGLGALLLAANPPLALADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETLDNPETIKAFNQYVEDSLAAALALYGSSTRIGELPDPKSRTVEKEAEDFVKEVNAMAKGGDVKASYEGAKTALAAYLAGTKLEPLSDPVYKDMDR 202
BLAST of EWM26707.1 vs. NCBI_GenBank
Match: gi|299115697|emb|CBN74262.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.5077 bits (223), Expect = 1.073e-18 Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 0
Query: 73 LADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETL----DNPETIKAFNQYVEDSLAAALALYGSSTRIGELPDPKSRTVEKEAEDFVKEVNAMA-----KGGDVKAS--YEGAKTALAAYLAGTKLEPLSDPVYK 198
ADSTGKYS+K TA+KRYLPR+ K V FQ L + + +P++ + F + DS+ +A+ LYGSS + GE PD KSR +++ A+DF ++ KGG+ +AS Y+ A + L YL G +L+PL VY
Sbjct: 116 FADSTGKYSSKATARKRYLPRIVKLVNAFQMLKKDIASGSASPKS-EFFVDVLADSV-SAMDLYGSSMKKGETPDSKSRALQQLAQDFGSTCTSIGKSLGKKGGEEEASKAYDKASSILVKYLEGVELDPLGSDVYN 250
BLAST of EWM26707.1 vs. NCBI_GenBank
Match: gi|873240369|emb|CEL93463.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 74.3294 bits (181), Expect = 7.418e-13 Identity = 61/176 (34.66%), Postives = 96/176 (54.55%), Query Frame = 0
Query: 32 RKEALTLCA-FKGTADRRDHIRSQVALGGLGALLLAANPPLALADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETLDNP--ETIKAFNQYVEDSLAAALALYGS-STRIGELPDPKSRTVEKEAEDFVKEVNAM---AKGGD---VKASYEGAKTALAAYLAGTKLEPLSDPVY 197
R+EA L ++ RR HI + + A+L AA+ P A+ADSTG+YS+ TAKKRYLPR+ +G+++F +L ++ + + F + AAL LY + + + GE D KS + A++F K V+ M K D +K +Y A+ L +YL+ +L P+ D Y
Sbjct: 44 RREAHVLVEDAMSSSSRRVHIGTLLIAP---AVLTAASLP-AVADSTGRYSSIATAKKRYLPRINRGISEFASLKGEVNGGGFDGVSTFLTSRAPDMVAALDLYATGALKKGEYLDKKSLGAKGAADEFTKHVDEMRSAVKAKDKEALKTAYLAAEEDLTSYLSIGELPPIGDATY 215
BLAST of EWM26707.1 vs. NCBI_GenBank
Match: gi|551658642|ref|XP_005832091.1| (hypothetical protein GUITHDRAFT_109155 [Guillardia theta CCMP2712] >gi|428176225|gb|EKX45111.1| hypothetical protein GUITHDRAFT_109155 [Guillardia theta CCMP2712]) HSP 1 Score: 70.8626 bits (172), Expect = 4.675e-12 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 0
Query: 69 PPLALADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETLDNPETIKAFNQY---VEDSLAAALALYGSSTRIGELPDPKSRTVEKEAEDFVKEVNAMAKGGD---VKASYE 174
P A ADSTGK+S+K+TAK RY+PRV+KG+ E +D E+ +A + +E + A+ LYG + + E+PD S + K+AE F + + A D VKAS++
Sbjct: 33 PTYAFADSTGKFSSKRTAKNRYVPRVKKGL-------EIMDGIESGRATIEQLLEIEPDMVNAMKLYGDAQKKSEVPDKISIRLNKDAEAFSQAIKAAGSNADIAKVKASWQ 137 The following BLAST results are available for this feature:
BLAST of EWM26707.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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