EWM26601.1, cds4014 (CDS) Nannochloropsis gaditana

Overview
NameEWM26601.1
Unique Namecds4014
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:651292..652356 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26601.1
Productprotein of unknown function DUF4033
Orig transcript idgnl|cribi|Naga_100001g93.8112.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:651292..652356 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR025114DUF4033
Homology
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|585108689|gb|EWM26601.1| (protein of unknown function DUF4033 [Nannochloropsis gaditana])

HSP 1 Score: 729.939 bits (1883), Expect = 0.000e+0
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0
Query:    1 MRGSSTFLVKTGDPSLGEQSYIIYNSSFKFNNDTIRCPGSQSNLARRPHSPPNPSFNLPHDLSPFPGAYLTGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
            MRGSSTFLVKTGDPSLGEQSYIIYNSSFKFNNDTIRCPGSQSNLARRPHSPPNPSFNLPHDLSPFPGAYLTGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL
Sbjct:    1 MRGSSTFLVKTGDPSLGEQSYIIYNSSFKFNNDTIRCPGSQSNLARRPHSPPNPSFNLPHDLSPFPGAYLTGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|553190033|ref|XP_005855116.1| (hypothetical protein NGA_2097720, partial [Nannochloropsis gaditana CCMP526] >gi|553190691|ref|XP_005855241.1| hypothetical protein NGA_2097710, partial [Nannochloropsis gaditana CCMP526] >gi|422293819|gb|EKU21119.1| hypothetical protein NGA_2097710, partial [Nannochloropsis gaditana CCMP526] >gi|422293944|gb|EKU21244.1| hypothetical protein NGA_2097720, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 281/284 (98.94%), Postives = 282/284 (99.30%), Query Frame = 0
Query:   71 TGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
            TGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLI ATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNT FPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCH+IEL
Sbjct:    1 TGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLIAATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTQFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHEIEL 284          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|299470735|emb|CBN79781.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 259.61 bits (662), Expect = 2.871e-81
Identity = 124/231 (53.68%), Postives = 167/231 (72.29%), Query Frame = 0
Query:  129 RRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGS-DTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKA----PTGELSNCHQIEL 354
            R GP DA P Y    RP D +L   FR+KL +++GG  D     + GL+++I+ LN  FP+  K  TQ+A++ +L+SLFPSWLPA+FAVMFSKPFPAFS+R+NA +T + + WLMG S++ D+++D G+VGVG GLLV+RCR+LE AGCAS+C+NTCK+PT+ FF +DMGL L MTP+Y+DFSC F+F  TP     DEA RVACF QCP+  A        ++ CHQI++
Sbjct:   85 RAGPTDATPTYD-DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRK--TQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDI 312          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|159489146|ref|XP_001702558.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158280580|gb|EDP06337.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 256.144 bits (653), Expect = 1.867e-80
Identity = 122/229 (53.28%), Postives = 165/229 (72.05%), Query Frame = 0
Query:  127 LQRRGPIDAPPEYG-MQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
            L++ GP+DA P+Y  +  +P + ++ A FR K+V+ LG SD+    +  +I+L RKLNT F  + +  TQ+A + IL +LFPSWLP AF VMFS+P P FS R+NA+ T +T  WLMG  ++ DV++DGG VG G G+LV+RCRYLE+AGCAS+C+N+CK+PTQ+FF +DMGLPLTMTP+YDDFSC F+FG TP PV  D A    CF+QCP+ ++ T     C  IEL
Sbjct:   48 LRQAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALG-SDSKLSGYDAIIDLTRKLNTKFRTAAE--TQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRSRT---PVCGGIEL 270          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|926779412|ref|XP_013898180.1| (hypothetical protein MNEG_8803 [Monoraphidium neglectum] >gi|761967781|gb|KIY99160.1| hypothetical protein MNEG_8803 [Monoraphidium neglectum])

HSP 1 Score: 247.669 bits (631), Expect = 6.164e-77
Identity = 121/229 (52.84%), Postives = 157/229 (68.56%), Query Frame = 0
Query:  113 ARDISPQTLITATRLQRRGPIDAPPEYG-MQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAK 340
            AR   P     AT+L++ GP    P Y  +  +P + ++ A FR K+V+ +G SD+  + +  +I+L R+LN  +  +    TQ A + IL SLFPSWLP AF VMFS P PAFS R+NA+ T LT  WLMG  ++ DV++D G VG G G+LV+RCRYLEEAGCASIC+N+CK+PTQ FF +DMGLPLTMTP+Y+DFSC FAFG TP P   DEA    CF+QCP+ K
Sbjct:   48 ARAAGPLDGAAATQLRQAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIG-SDSQLQGYPAIIDLTRRLNRQYQTARD--TQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSKK 273          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|219109820|ref|XP_002176663.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411198|gb|EEC51126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 237.654 bits (605), Expect = 1.530e-72
Identity = 115/197 (58.38%), Postives = 140/197 (71.07%), Query Frame = 0
Query:  144 RPFDGLLYAFFRAKLVQQLGGSDTASK--DFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPT 338
            R  D L    FR KL   +GG+D++    DF G+I+L   +N  F + GK+    AAQ +LR LFPSW+P ++AV+FSKPFPAFS+RMNA  T +   WLMGE EI DV VDGG VG GQGLLVKRCR+LEE+GCASICVN+CKIPTQNFF QDMGLPLTM P+Y+ F C F+FG TP    + +A    C S+CPT
Sbjct:  101 RWMDLLFLRVFRRKLAGHVGGADSSRNVTDFMGIIDLAAAMNRRF-SQGKI--HSAAQQVLRELFPSWMPGSYAVLFSKPFPAFSSRMNAWATKVAGTWLMGECEINDVVVDGGEVGEGQGLLVKRCRFLEESGCASICVNSCKIPTQNFFAQDMGLPLTMEPNYETFECQFSFGRTPDSSTELDAKSTPCLSRCPT 294          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|545364979|ref|XP_005647503.1| (hypothetical protein COCSUDRAFT_15824 [Coccomyxa subellipsoidea C-169] >gi|384249478|gb|EIE22959.1| hypothetical protein COCSUDRAFT_15824 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 229.565 bits (584), Expect = 9.141e-71
Identity = 110/218 (50.46%), Postives = 148/218 (67.89%), Query Frame = 0
Query:  129 RRGPIDAPPEY-GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGE 345
            + GP    P Y  +  +P +  + + FR K+V  +G  ++  + +  +++L R LN+   +S    TQ   + IL SLFPSWLP AF VMFSKP P  S ++NA +T LT  WLMG  ++ DV++DGG +G GQG+LV+RCRYLEE GCAS+C+N+CKIPTQ FF +DMGLPLTMTP+Y+DFSC F+FGLTP P   DEA    CFSQCP+ +   G+
Sbjct:    7 KAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIG-KNSDKEGYDAIVDLTRLLNSK--SSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSKQRHRGD 221          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|552828611|ref|XP_005847526.1| (hypothetical protein CHLNCDRAFT_134573 [Chlorella variabilis] >gi|307107180|gb|EFN55424.1| hypothetical protein CHLNCDRAFT_134573 [Chlorella variabilis])

HSP 1 Score: 224.557 bits (571), Expect = 1.671e-68
Identity = 111/220 (50.45%), Postives = 143/220 (65.00%), Query Frame = 0
Query:  144 RPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAP---------TGELSNCHQIEL 354
            +P +  +Y+ FR ++VQ +G SD+  + +A +I+L R+LN     S   GTQ+A   ILRSLFP WLP AFAVMFSKP P           GL+  WLMGE E+ DV++DGG +G G G+LVKRCRYLEEA CAS+C+N+CK+PTQ FF + MGLPL M P+Y+DFSC F+FG TPPP   D A    CF +CPTA+             E   CH+I+L
Sbjct:   47 QPLNRAVYSLFRGRMVQAIG-SDSQQEGYAAIIDLTRRLNAQH--SSPRGTQEATVGILRSLFPGWLPPAFAVMFSKPMP-----------GLSCQWLMGECEVNDVEIDGGRMGAGHGVLVKRCRYLEEAACASVCINSCKVPTQEFFQRHMGLPLEMKPNYEDFSCQFSFGKTPPPEAQDAAFSTPCFQKCPTAQRAAAALAADEGVEEGQRCHKIQL 252          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|1210531106|dbj|GAX10207.1| (hypothetical protein FisN_3Lh404 [Fistulifera solaris])

HSP 1 Score: 219.55 bits (558), Expect = 2.691e-66
Identity = 112/217 (51.61%), Postives = 138/217 (63.59%), Query Frame = 0
Query:  129 RRGPIDAPPEY----GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKA 341
            R  P++  P+Y    G   R  D      FR KL + +G   T    +A +I+L  KLN  +  S +   Q+ AQ  L  LFPSWLP ++AV+FSKP P FSARMNA  T     WLMGE EI D+  DGG  G  QGLLVKRCR+LEEAGCAS+CVN+CKIPTQNFF Q+MGLPLTM P+Y+ F C F+FG TP P  + +A+   C  +CPTA A
Sbjct:   39 RGPPMETKPDYEAIVGPLGRAVDNFFLDLFRQKLEENVGFG-TNETGYAAIIDLTSKLNARY--SDRKEIQRRAQKTLIDLFPSWLPGSYAVLFSKPLPKFSARMNAWATWWAGTWLMGECEINDITADGGEPGPAQGLLVKRCRFLEEAGCASVCVNSCKIPTQNFFLQEMGLPLTMEPNYETFECQFSFGKTPTPETELDAIGTPCLMRCPTAGA 252          
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|1210524924|dbj|GAX16116.1| (hypothetical protein FisN_3Hh404 [Fistulifera solaris])

HSP 1 Score: 219.164 bits (557), Expect = 4.102e-66
Identity = 110/214 (51.40%), Postives = 138/214 (64.49%), Query Frame = 0
Query:  132 PIDAPPEY----GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKA 341
            P++  P+Y    G   R  D L    FR KL + +G   T    +A +I+L  KLN  +  S +   ++ AQ  L  LFPSWLP ++A++FSKPFP FSARMNA  T     WLMGE EI D+  DG   G  QGLLVKRCR+LEEAGCAS+CVN+CKIPTQNFF Q+MGLPLTM P+Y+ F C F+FG TP P  + +A+   C  +CPTA A
Sbjct:   42 PMETKPDYDAIVGPLGRAVDNLFLDLFRQKLEENVG-FQTNETGYAAIIDLTSKLNARY--SDREEIRRRAQKTLSDLFPSWLPGSYAILFSKPFPRFSARMNAWATWWAGTWLMGECEINDITADGREPGPAQGLLVKRCRFLEEAGCASVCVNSCKIPTQNFFLQEMGLPLTMEPNYETFECQFSFGKTPTPETELDAVGTPCLMRCPTAGA 252          
The following BLAST results are available for this feature:
BLAST of EWM26601.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108689|gb|EWM26601.1|0.000e+0100.00protein of unknown function DUF4033 [Nannochlorops... [more]
gi|553190033|ref|XP_005855116.1|0.000e+098.94hypothetical protein NGA_2097720, partial [Nannoch... [more]
gi|299470735|emb|CBN79781.1|2.871e-8153.68conserved unknown protein [Ectocarpus siliculosus][more]
gi|159489146|ref|XP_001702558.1|1.867e-8053.28predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|926779412|ref|XP_013898180.1|6.164e-7752.84hypothetical protein MNEG_8803 [Monoraphidium negl... [more]
gi|219109820|ref|XP_002176663.1|1.530e-7258.38predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|545364979|ref|XP_005647503.1|9.141e-7150.46hypothetical protein COCSUDRAFT_15824 [Coccomyxa s... [more]
gi|552828611|ref|XP_005847526.1|1.671e-6850.45hypothetical protein CHLNCDRAFT_134573 [Chlorella ... [more]
gi|1210531106|dbj|GAX10207.1|2.691e-6651.61hypothetical protein FisN_3Lh404 [Fistulifera sola... [more]
gi|1210524924|dbj|GAX16116.1|4.102e-6651.40hypothetical protein FisN_3Hh404 [Fistulifera sola... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4024rna4024Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications