EWM26601.1, cds4014 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|585108689|gb|EWM26601.1| (protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 729.939 bits (1883), Expect = 0.000e+0 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0
Query: 1 MRGSSTFLVKTGDPSLGEQSYIIYNSSFKFNNDTIRCPGSQSNLARRPHSPPNPSFNLPHDLSPFPGAYLTGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
MRGSSTFLVKTGDPSLGEQSYIIYNSSFKFNNDTIRCPGSQSNLARRPHSPPNPSFNLPHDLSPFPGAYLTGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL
Sbjct: 1 MRGSSTFLVKTGDPSLGEQSYIIYNSSFKFNNDTIRCPGSQSNLARRPHSPPNPSFNLPHDLSPFPGAYLTGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|553190033|ref|XP_005855116.1| (hypothetical protein NGA_2097720, partial [Nannochloropsis gaditana CCMP526] >gi|553190691|ref|XP_005855241.1| hypothetical protein NGA_2097710, partial [Nannochloropsis gaditana CCMP526] >gi|422293819|gb|EKU21119.1| hypothetical protein NGA_2097710, partial [Nannochloropsis gaditana CCMP526] >gi|422293944|gb|EKU21244.1| hypothetical protein NGA_2097720, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 281/284 (98.94%), Postives = 282/284 (99.30%), Query Frame = 0
Query: 71 TGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLITATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
TGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLI ATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNT FPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCH+IEL
Sbjct: 1 TGMARGRSCLLLFSALISVSNFLHSHAKKSATAVIPLFILPSARDISPQTLIAATRLQRRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTQFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHEIEL 284
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|299470735|emb|CBN79781.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 259.61 bits (662), Expect = 2.871e-81 Identity = 124/231 (53.68%), Postives = 167/231 (72.29%), Query Frame = 0
Query: 129 RRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGS-DTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKA----PTGELSNCHQIEL 354
R GP DA P Y RP D +L FR+KL +++GG D + GL+++I+ LN FP+ K TQ+A++ +L+SLFPSWLPA+FAVMFSKPFPAFS+R+NA +T + + WLMG S++ D+++D G+VGVG GLLV+RCR+LE AGCAS+C+NTCK+PT+ FF +DMGL L MTP+Y+DFSC F+F TP DEA RVACF QCP+ A ++ CHQI++
Sbjct: 85 RAGPTDATPTYD-DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRK--TQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDI 312
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|159489146|ref|XP_001702558.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158280580|gb|EDP06337.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 256.144 bits (653), Expect = 1.867e-80 Identity = 122/229 (53.28%), Postives = 165/229 (72.05%), Query Frame = 0
Query: 127 LQRRGPIDAPPEYG-MQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
L++ GP+DA P+Y + +P + ++ A FR K+V+ LG SD+ + +I+L RKLNT F + + TQ+A + IL +LFPSWLP AF VMFS+P P FS R+NA+ T +T WLMG ++ DV++DGG VG G G+LV+RCRYLE+AGCAS+C+N+CK+PTQ+FF +DMGLPLTMTP+YDDFSC F+FG TP PV D A CF+QCP+ ++ T C IEL
Sbjct: 48 LRQAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALG-SDSKLSGYDAIIDLTRKLNTKFRTAAE--TQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRSRT---PVCGGIEL 270
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|926779412|ref|XP_013898180.1| (hypothetical protein MNEG_8803 [Monoraphidium neglectum] >gi|761967781|gb|KIY99160.1| hypothetical protein MNEG_8803 [Monoraphidium neglectum]) HSP 1 Score: 247.669 bits (631), Expect = 6.164e-77 Identity = 121/229 (52.84%), Postives = 157/229 (68.56%), Query Frame = 0
Query: 113 ARDISPQTLITATRLQRRGPIDAPPEYG-MQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAK 340
AR P AT+L++ GP P Y + +P + ++ A FR K+V+ +G SD+ + + +I+L R+LN + + TQ A + IL SLFPSWLP AF VMFS P PAFS R+NA+ T LT WLMG ++ DV++D G VG G G+LV+RCRYLEEAGCASIC+N+CK+PTQ FF +DMGLPLTMTP+Y+DFSC FAFG TP P DEA CF+QCP+ K
Sbjct: 48 ARAAGPLDGAAATQLRQAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIG-SDSQLQGYPAIIDLTRRLNRQYQTARD--TQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSKK 273
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|219109820|ref|XP_002176663.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411198|gb|EEC51126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 237.654 bits (605), Expect = 1.530e-72 Identity = 115/197 (58.38%), Postives = 140/197 (71.07%), Query Frame = 0
Query: 144 RPFDGLLYAFFRAKLVQQLGGSDTASK--DFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPT 338
R D L FR KL +GG+D++ DF G+I+L +N F + GK+ AAQ +LR LFPSW+P ++AV+FSKPFPAFS+RMNA T + WLMGE EI DV VDGG VG GQGLLVKRCR+LEE+GCASICVN+CKIPTQNFF QDMGLPLTM P+Y+ F C F+FG TP + +A C S+CPT
Sbjct: 101 RWMDLLFLRVFRRKLAGHVGGADSSRNVTDFMGIIDLAAAMNRRF-SQGKI--HSAAQQVLRELFPSWMPGSYAVLFSKPFPAFSSRMNAWATKVAGTWLMGECEINDVVVDGGEVGEGQGLLVKRCRFLEESGCASICVNSCKIPTQNFFAQDMGLPLTMEPNYETFECQFSFGRTPDSSTELDAKSTPCLSRCPT 294
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|545364979|ref|XP_005647503.1| (hypothetical protein COCSUDRAFT_15824 [Coccomyxa subellipsoidea C-169] >gi|384249478|gb|EIE22959.1| hypothetical protein COCSUDRAFT_15824 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 229.565 bits (584), Expect = 9.141e-71 Identity = 110/218 (50.46%), Postives = 148/218 (67.89%), Query Frame = 0
Query: 129 RRGPIDAPPEY-GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGE 345
+ GP P Y + +P + + + FR K+V +G ++ + + +++L R LN+ +S TQ + IL SLFPSWLP AF VMFSKP P S ++NA +T LT WLMG ++ DV++DGG +G GQG+LV+RCRYLEE GCAS+C+N+CKIPTQ FF +DMGLPLTMTP+Y+DFSC F+FGLTP P DEA CFSQCP+ + G+
Sbjct: 7 KAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIG-KNSDKEGYDAIVDLTRLLNSK--SSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSKQRHRGD 221
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|552828611|ref|XP_005847526.1| (hypothetical protein CHLNCDRAFT_134573 [Chlorella variabilis] >gi|307107180|gb|EFN55424.1| hypothetical protein CHLNCDRAFT_134573 [Chlorella variabilis]) HSP 1 Score: 224.557 bits (571), Expect = 1.671e-68 Identity = 111/220 (50.45%), Postives = 143/220 (65.00%), Query Frame = 0
Query: 144 RPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAP---------TGELSNCHQIEL 354
+P + +Y+ FR ++VQ +G SD+ + +A +I+L R+LN S GTQ+A ILRSLFP WLP AFAVMFSKP P GL+ WLMGE E+ DV++DGG +G G G+LVKRCRYLEEA CAS+C+N+CK+PTQ FF + MGLPL M P+Y+DFSC F+FG TPPP D A CF +CPTA+ E CH+I+L
Sbjct: 47 QPLNRAVYSLFRGRMVQAIG-SDSQQEGYAAIIDLTRRLNAQH--SSPRGTQEATVGILRSLFPGWLPPAFAVMFSKPMP-----------GLSCQWLMGECEVNDVEIDGGRMGAGHGVLVKRCRYLEEAACASVCINSCKVPTQEFFQRHMGLPLEMKPNYEDFSCQFSFGKTPPPEAQDAAFSTPCFQKCPTAQRAAAALAADEGVEEGQRCHKIQL 252
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|1210531106|dbj|GAX10207.1| (hypothetical protein FisN_3Lh404 [Fistulifera solaris]) HSP 1 Score: 219.55 bits (558), Expect = 2.691e-66 Identity = 112/217 (51.61%), Postives = 138/217 (63.59%), Query Frame = 0
Query: 129 RRGPIDAPPEY----GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKA 341
R P++ P+Y G R D FR KL + +G T +A +I+L KLN + S + Q+ AQ L LFPSWLP ++AV+FSKP P FSARMNA T WLMGE EI D+ DGG G QGLLVKRCR+LEEAGCAS+CVN+CKIPTQNFF Q+MGLPLTM P+Y+ F C F+FG TP P + +A+ C +CPTA A
Sbjct: 39 RGPPMETKPDYEAIVGPLGRAVDNFFLDLFRQKLEENVGFG-TNETGYAAIIDLTSKLNARY--SDRKEIQRRAQKTLIDLFPSWLPGSYAVLFSKPLPKFSARMNAWATWWAGTWLMGECEINDITADGGEPGPAQGLLVKRCRFLEEAGCASVCVNSCKIPTQNFFLQEMGLPLTMEPNYETFECQFSFGKTPTPETELDAIGTPCLMRCPTAGA 252
BLAST of EWM26601.1 vs. NCBI_GenBank
Match: gi|1210524924|dbj|GAX16116.1| (hypothetical protein FisN_3Hh404 [Fistulifera solaris]) HSP 1 Score: 219.164 bits (557), Expect = 4.102e-66 Identity = 110/214 (51.40%), Postives = 138/214 (64.49%), Query Frame = 0
Query: 132 PIDAPPEY----GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKA 341
P++ P+Y G R D L FR KL + +G T +A +I+L KLN + S + ++ AQ L LFPSWLP ++A++FSKPFP FSARMNA T WLMGE EI D+ DG G QGLLVKRCR+LEEAGCAS+CVN+CKIPTQNFF Q+MGLPLTM P+Y+ F C F+FG TP P + +A+ C +CPTA A
Sbjct: 42 PMETKPDYDAIVGPLGRAVDNLFLDLFRQKLEENVG-FQTNETGYAAIIDLTSKLNARY--SDREEIRRRAQKTLSDLFPSWLPGSYAILFSKPFPRFSARMNAWATWWAGTWLMGECEINDITADGREPGPAQGLLVKRCRFLEEAGCASVCVNSCKIPTQNFFLQEMGLPLTMEPNYETFECQFSFGKTPTPETELDAVGTPCLMRCPTAGA 252 The following BLAST results are available for this feature:
BLAST of EWM26601.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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