EWM26674.1, cds4003 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|585108762|gb|EWM26674.1| (Cobalamin (vitamin B12) biosynthesis CobW [Nannochloropsis gaditana]) HSP 1 Score: 909.442 bits (2349), Expect = 0.000e+0 Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query: 1 MTSSQDDLLTEQGEDDEEPPKLVLLSSQVVSQPSSRPGEGDADLSETKSGSSNPIPIDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEEDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQTPGGGGAARGCSGGRG 448
MTSSQDDLLTEQGEDDEEPPKLVLLSSQVVSQPSSRPGEGDADLSETKSGSSNPIPIDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEEDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQTPGGGGAARGCSGGRG
Sbjct: 1 MTSSQDDLLTEQGEDDEEPPKLVLLSSQVVSQPSSRPGEGDADLSETKSGSSNPIPIDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEEDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQTPGGGGAARGCSGGRG 448
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|669171675|ref|XP_008621186.1| (hypothetical protein SDRG_16747 [Saprolegnia diclina VS20] >gi|530727142|gb|EQC25384.1| hypothetical protein SDRG_16747 [Saprolegnia diclina VS20]) HSP 1 Score: 268.47 bits (685), Expect = 3.646e-83 Identity = 155/375 (41.33%), Postives = 210/375 (56.00%), Query Frame = 0
Query: 59 KIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPE-EDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQ 432
K VPVT++TGFLG+GKTTLLN+ILTQ HGKRIAVIENEFG+ +G+ES IA+DGADG + F+EL NGCICC+V++DL++TLE L+ R+ +FDYV++ET+G+ADPG +AS WVD ELE ++ LDGIVTVVDAK ++ H+ G + GQ R+EA QI ADRI++NK DLVP D +LE +L G+N +A + T S +DLD +L ++ +S + D FL+ + S ++V+T I V A++RWL LLW + S YR+KG +SV D ILQ V + FEL S+
Sbjct: 3 KQVPVTVLTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGADGETFADFYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIVTVVDAKNVALHLD-GDEHGQ-----------------------------------------RQEALSQIAYADRILINKADLVPSMTDRDALEAQLHGINAIAPLIWTERSQIDLDAILNVQAFSSERALDVERFLAATNQTV-----SSDHARQVSTYCIRSDASVTIAAMERWLGSLLWESEES---------------------------SHYYRIKGIVSVVDDDRKFILQGVQDLFELTPSE 303
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|813140780|ref|XP_012198894.1| (hypothetical protein SPRG_04990 [Saprolegnia parasitica CBS 223.65] >gi|641536307|gb|KDO30196.1| hypothetical protein SPRG_04990 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 264.618 bits (675), Expect = 1.252e-81 Identity = 153/377 (40.58%), Postives = 211/377 (55.97%), Query Frame = 0
Query: 57 IDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPE-EDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQ 432
+ K VPVT++TGFLG+GKTTLLN+ILTQ HGKRIAVIENEFG+ +G+ES IA+DGADG + F+EL NGCICC+V++DL++TLE L+ R+ +FDYV++ET+G+ADPG +AS WVD ELE ++ LDGI+TVVDAK ++ H+ G + GQ R+EA QI ADRI++NK DLVP D +LE +L G+N +A + T S +DLD +L ++ +S + D FL+ + S ++V+T I V A++RWL LLW + S YR+KG +SV + ILQ V + FEL S+
Sbjct: 1 MTKQVPVTVLTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGADGETFADFYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIITVVDAKNVALHLD-GDEHGQ-----------------------------------------RQEALSQIAYADRILINKADLVPSTTDREALEAQLHGINAIAPLIWTERSQIDLDAILNVQAFSSERALDVERFLAATNQTV-----SSDHARQVSTYCIRSDAPVTIAAMERWLGHLLWESEES---------------------------SHYYRIKGIVSVVDDERKFILQGVQDLFELTPSE 303
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|1173934370|gb|OQR85746.1| (cobalamin synthesis protein [Achlya hypogyna]) HSP 1 Score: 261.536 bits (667), Expect = 2.010e-80 Identity = 151/380 (39.74%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 57 IDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPE-EDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQTPG 435
+ K VPVT++TGFLG+GKTTLLN+ILTQ HGKRIAVIENEFG+ +G+ES IA+DGADG + F+EL NGCICC+V++DL++TLE L+ R+ +FDYV++ET+G+ADPG +AS WVD ELE ++ LDGIVTVVDAK + H++ G + Q R+EA QI ADRI++NK DL+P ED +LE +L +N +A T S +DLD +L ++ +S + D +L+ ++ + ++V+T + + AV+RWL LLW + EG+ YR+KG ++VA ILQ V + FEL S+ G
Sbjct: 1 MTKQVPVTVLTGFLGAGKTTLLNYILTQDHGKRIAVIENEFGEEIGVESLIARDGADGETFADFYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIVTVVDAKNVMHHLN-GSETSQ-----------------------------------------RQEALSQIAYADRILINKADLMPALEDRAALEAQLHSINAIAPCLWTERSVIDLDTILNVQAFSSERAMDVEQYLTATNQSVAADH-----AQQVSTTCVRSRTPISVAAVERWLGTLLW-----EAPEGD-------------------DASYFYRIKGVVAVADDHRKFILQGVQDLFELTPSEPWG 309
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|298710215|emb|CBJ26290.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 258.455 bits (659), Expect = 1.341e-77 Identity = 182/497 (36.62%), Postives = 243/497 (48.89%), Query Frame = 0
Query: 15 DDEEPPKLVLLSSQV-VSQPSSRPGEGDADLSETKSGSSNPIPIDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSL-EGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEEDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGK-------TKEDPLPFLSCGERN--------------------GDGERHSH-----GGVKE-------------------------------VTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQTPGGG---GAARGC 443
DD+ PP LV + +S + P + +D++E P VPVTI+TGFLG+GKTTLLN+ILTQ HG+RIAVIENE G + IES IAKDGADGS L + FEL NGCICC+VK+DL+ TLE+L+QR+++FDYVIIET+GLA+PGPVAS W+DE LES LRLD IVT+VDAK R + R EG + + K + EA Q+ ADR+++NK+DLV E + +R +N +A ++ T S VDL ++L EC+S + + P L ++N GD HSH GG E VTT A+ P +D ++RWL LLW D P G E +YR+KG +SV G D ++Q V + FE+ ++ G G AR C
Sbjct: 4 DDDCPPDLVPAQGLLALSSNDTLPEDTSSDVAEVVVEVERPPTAPGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIAKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGEGAEAGAEGEEQSGKRP---------------------------KNEAAMQVAYADRVLINKSDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPRALLGTAQQNEGGRGSSAADRGIARTGSGPGDAHVHSHDVEPSGGHTESVHHHADGEACDECAAAEGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLW-DPPPGGTE-------------------------VYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRC 447
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|698808410|ref|XP_009837234.1| (hypothetical protein H257_11868 [Aphanomyces astaci] >gi|574107849|gb|ETV73359.1| hypothetical protein H257_11868 [Aphanomyces astaci]) HSP 1 Score: 249.595 bits (636), Expect = 6.100e-76 Identity = 145/373 (38.87%), Postives = 205/373 (54.96%), Query Frame = 0
Query: 61 VPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPE-EDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQ 432
VPVTI+TGFLG+GKTTLLN+ILTQ HGKRIAVIENEFG+ +G+ES IA+DGA+G + F+EL+NGCICCSV++DL++TLE L+ R+ +FDYV++ET+G+ADPG +AS WVD ELE ++ LDGIVT+VDAK I+ H+ E QT E QI ADRI++NK DL+P+ +D LE +L +N +A T S++DLD +L + +S E N + +H T ++ V P+ V G ++ W+ LLW D D ++I+R+KG +++ D ILQ V + F++ S+
Sbjct: 9 VPVTILTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGAEGDAFADFYELSNGCICCSVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDSELEGRITLDGIVTLVDAKNIAWHL-----EQQT-----------------------------------------NEVLSQIAYADRILVNKADLMPDADDRRRLEGQLNAMNALAPCIWTERSNIDLDAILNINAFSSDR-----AIAVMNEHNATEKPFTHTANVTSTCVSRVLPLSVRG--LEYWIGSLLWEDATDD--------------------------RRIFRIKGVVAIENDDRKFILQGVQDLFDVSPSE 302
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|673024086|ref|XP_008866004.1| (hypothetical protein H310_03788 [Aphanomyces invadans] >gi|574477570|gb|ETW04566.1| hypothetical protein H310_03788 [Aphanomyces invadans]) HSP 1 Score: 248.825 bits (634), Expect = 1.384e-75 Identity = 149/373 (39.95%), Postives = 206/373 (55.23%), Query Frame = 0
Query: 61 VPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPE-EDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFELEASQ 432
VPVTI+TGFLG+GKTTLLN+ILTQ HGKRIAVIENEFG+ +G+ES IA+DGA+G + F+EL+NGCICCSV++DL++TLE L+ R+ +FDYV++ET+G+ADPG +AS WVD ELE ++ LDGIVT+VDAK I+ HLE+ N E QI ADRI++NK D +P+ ED LE +L N +A T SHVDLD +L ++ +SG L N + V++ I + + A++ W+ LLW + +DG +I+R+KG +SVAG +ILQ V + F++ AS+
Sbjct: 9 VPVTILTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGAEGEAFADFYELSNGCICCSVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASMFWVDNELEGRITLDGIVTLVDAKNIAW----------------HLEQKTN------------------------------EVMSQIAYADRILINKADQMPQDEDRRRLEQQLGVTNALAPCYWTERSHVDLDAILNIQAFSGDRAMAVL--------NEQSVEKAFPHTNSVSSTCIRRELPLTVRALEHWIGTLLWEPE-TDGT-------------------------RIFRIKGIVSVAGDACKYILQGVQDLFDVTASE 301
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|330843629|ref|XP_003293752.1| (hypothetical protein DICPUDRAFT_58645 [Dictyostelium purpureum] >gi|325075889|gb|EGC29726.1| hypothetical protein DICPUDRAFT_58645 [Dictyostelium purpureum]) HSP 1 Score: 248.054 bits (632), Expect = 1.383e-74 Identity = 142/385 (36.88%), Postives = 217/385 (56.36%), Query Frame = 0
Query: 61 VPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVP----EEDTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGG-------------VKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFEL 428
VP+T+ITGFLGSGKTT LN+IL + HGK+IAVI+NE+G+ +GIE+A+ D ++G ++ + E NGCICC+VK+D L ++E L++R +FDY++IE++G+ DPG ++S LWVDEELES + LDGI+T+VDAK++ +HI K++ +E+++ + SN N +++ YY E RQI AD I+LNK DL+ E++ S+E ++R +N MA+I T S V LD VL + Y+ P L N ++H H K + T+ I + +VD + RW+ +LLW DE ++ I+R+KG +S+ +ILQ V+ TFE+
Sbjct: 21 VPITLITGFLGSGKTTFLNYILNENHGKKIAVIQNEYGQSIGIETAMIVD-SNGEKVQEWLEFPNGCICCTVKDDFLQSIEDLLKRSDKFDYILIESTGMGDPGQISSSLWVDEELESPIYLDGIITLVDAKHVEKHIE------------------KSKASEKLSMNNSNNTHN--SGESNDSKYYSTEVERQIAFADIILLNKIDLLDQNNLEKEIASVESKIRSINPMAKIITTERSKVPLDQVLNVNAYT------PNIDLLKDYINNSEKQHHHDNKNDEKSCDQCSNHSKHINTICITQDFDVDLDEFTRWVGNLLW-----------------DE-----------KKDSIFRIKGLISIKDDKEKYILQGVYSTFEV 350
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|1009154052|ref|XP_015894962.1| (PREDICTED: COBW domain-containing protein 1 isoform X4 [Ziziphus jujuba]) HSP 1 Score: 234.572 bits (597), Expect = 1.267e-69 Identity = 153/420 (36.43%), Postives = 215/420 (51.19%), Query Frame = 0
Query: 13 GEDDEEPPKLVLLSSQVVSQPSSRPGEGDADLSETKSGSSNPIPIDKIVPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEE----DTISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFEL 428
G+++E+PP L+ Q+ QP+S + D D V VT+ITG+LG+GK+TL+NHIL HGKRIAVI NEFG+ +G+E A+ +G G+ +E + ELANGCICC+VK+ L+ LE LVQRK + D++++ET+GLA+P P+AS LW+D++LES ++LD I+TVVDAK + FQ D H R +S + EA+ QI AD ++LNK DLV E D LE ++ +N +A I RT + VDL +L Y L + H G V TL I E +VD + V+ WL ++LW D K G +YR KG L+V S+ +H LQAV E +E+
Sbjct: 2 GDEEEDPP----LAVQI-DQPTSTAPQDD----------------DVSVGVTVITGYLGAGKSTLVNHILNSHHGKRIAVILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCNVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLR------------FQLDEH----------RSSSSFA-------------------EAYHQIAFADVVILNKVDLVSPEGSGGDLEELEKDIHSINALANIIRTTHCQVDLSKILDCRAYDATHITRLEALLEESHSLSTQKLHDSG----VRTLCICETRQVDVDKVRSWLEEILW-----DKKYG----------------------MDVYRCKGVLNVNNSNQLHTLQAVREIYEI 328
BLAST of EWM26674.1 vs. NCBI_GenBank
Match: gi|1137201351|gb|OMO71963.1| (hypothetical protein COLO4_27903 [Corchorus olitorius]) HSP 1 Score: 241.121 bits (614), Expect = 7.521e-69 Identity = 153/419 (36.52%), Postives = 218/419 (52.03%), Query Frame = 0
Query: 15 DDEEPPKLVLLSSQVVSQPSSRPGEGDADLSETKSGSSNPIPIDKI-VPVTIITGFLGSGKTTLLNHILTQPHGKRIAVIENEFGKGLGIESAIAKDGADGSSLEGFFELANGCICCSVKNDLLATLEVLVQRKSQFDYVIIETSGLADPGPVASCLWVDEELESQLRLDGIVTVVDAKYISRHIHRGGQEGQTFQGDSHLERVKNRGAERVTSDVSNICENLRCPVASEEVYYREEAFRQICVADRIVLNKTDLVPEEDT----ISLEDELRGLNGMARIQRTVYSHVDLDFVLGLECYSGKTKEDPLPFLSCGERNGDGERHSHGGVKEVTTLAIVEPVEVDGEAVKRWLADLLWRDDPSDGKEGEREDVGRDEGIQDSIRESRCQRQQIYRMKGTLSVAGSDMVHILQAVHETFEL 428
D+EE P L + Q V +PS +S S P P D + V VT+ITG+LG+GK+TL+N+IL HGKRIAVI NEFG+ +G+E A+ +G G+ +E + ELANGC+CC+VK+ L+ LE LVQ K + D++++ET+GLA+P P+AS LW+D++LES ++LD IVTVVDAK + FQ ++H C++ + P EAF QI AD +VLNK DLV E + LE E+R +N +A I R+V VDL +L + Y L + + H G V TL I + VD V+ W+ ++LW ++ D+ +YR KG LS+ SD +H LQAV E +E+
Sbjct: 3 DEEEEPPLAIQIDQTVGEPS-------------QSSSEQP-PYDNVSVGVTVITGYLGAGKSTLVNYILNAQHGKRIAVILNEFGEEIGVERAMINEGESGALVEEWVELANGCVCCTVKHSLVQALEQLVQMKKRLDHILLETTGLANPAPLASVLWLDDQLESSVKLDSIVTVVDAKNLR------------FQLNTH-------------------CDSTKFP----------EAFLQIAFADVVVLNKVDLVSSEGSEGAVEDLEKEIRSINSLANIIRSVRCQVDLSLLLNRQAYDATHASHLEALLEESKSIPSKDLHDSG----VRTLCINQTEAVDLNKVRLWIEEILWE---------KKYDID------------------VYRCKGVLSIQNSDNLHTLQAVREIYEI 335 The following BLAST results are available for this feature:
BLAST of EWM26674.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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