EWM26765.1, cds3993 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|585108853|gb|EWM26765.1| (hypothetical protein Naga_100001g115 [Nannochloropsis gaditana]) HSP 1 Score: 316.62 bits (810), Expect = 1.980e-109 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MSRSDEKGNVNANAAGTQTNITEGKRIAYTISVAADGPYKDGAAVLAHAIRKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYHLLSIWTWTLRFRNLWTHCSIFRT 152
MSRSDEKGNVNANAAGTQTNITEGKRIAYTISVAADGPYKDGAAVLAHAIRKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYHLLSIWTWTLRFRNLWTHCSIFRT
Sbjct: 1 MSRSDEKGNVNANAAGTQTNITEGKRIAYTISVAADGPYKDGAAVLAHAIRKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYHLLSIWTWTLRFRNLWTHCSIFRT 152
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|585109698|gb|EWM27444.1| (Glycosyl transferase, family 8, partial [Nannochloropsis gaditana]) HSP 1 Score: 83.9593 bits (206), Expect = 8.985e-17 Identity = 36/73 (49.32%), Postives = 56/73 (76.71%), Query Frame = 0
Query: 57 SHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYH 129
S Y ++ IA+VHP+VTT+ A+L + WK ++RD+P+D+ I+GT++R++ AK+GCC A EL+KL+A L YH
Sbjct: 3 SKYGVDFIAIVHPNVTTSRAALRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYH 75
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|551535057|ref|XP_005756354.1| (hypothetical protein EMIHUDRAFT_221729 [Emiliania huxleyi CCMP1516] >gi|485603193|gb|EOD03925.1| hypothetical protein EMIHUDRAFT_221729 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 80.8777 bits (198), Expect = 3.235e-15 Identity = 44/145 (30.34%), Postives = 72/145 (49.66%), Query Frame = 0
Query: 17 TQTNITEGKRIAYTISVAADGPYKDGAAVLAHAIRKA----------------------VKDSHYSMELIAMVHPSVT-TTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYHLLSIWTWTL 138
TQ ++A+ I++ DGPY DGAAVL H+IR A ++ Y L+A+ HP+V+ T A+L ++ L+R P+ + +I+G+++R+ ++GCC A EL+KL W W+L
Sbjct: 4 TQPGRRAPLQMAFVITLTMDGPYIDGAAVLGHSIRTAHSHFAKDGEPSPARAEAGEEGTLQPPTYVSSLVALTHPTVSNATRAALALVGFRVLERPTPVAIPEIRGSFLRQRIVRSGCCGATELMKL-------------WAWSL 135
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|219125352|ref|XP_002182947.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405741|gb|EEC45683.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 67.781 bits (164), Expect = 1.845e-10 Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 0
Query: 10 VNANAAGTQTNITEGKRIAYTISVAADG--PYKDGAAVLAHAI--RKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYHL 130
++A + T +T IAY ISV G P +G AVL H+I Y+ L A+ HPS + L ++ L+R+V ++V IKG ++R +NGCC ELIKL A L Y +
Sbjct: 31 IDAFKSNNSTPVT----IAYAISVTGCGSDPITEGGAVLKHSIHLNSIHGAGRYNYALFAIYHPSAVSCALPLKALGYELLEREVFVNVADIKGDFLRNKIEQNGCCGEKELIKLEAYTLTDYPI 151
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|298711578|emb|CBJ32639.1| (Putative zinc-protease albF [Ectocarpus siliculosus]) HSP 1 Score: 67.0106 bits (162), Expect = 2.088e-10 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0
Query: 41 DGAAVLAHAIRKAVKDSHYSMELIAMVHPSVTTT-HASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYH 129
D A VL +IR A K S Y E +A PSV+ L W+ +++D+P+ V+ I+ RK+ K+GCC A E IKLHA L YH
Sbjct: 92 DSAEVLIQSIRAACKLSRYRCEALAFTLPSVSQEGRQHLEGMGWRVVEKDLPVAVEDIENETYRKHVVKSGCCGANEFIKLHAYTLTQYH 181
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|397634553|gb|EJK71475.1| (hypothetical protein THAOC_07077, partial [Thalassiosira oceanica]) HSP 1 Score: 66.2402 bits (160), Expect = 4.706e-10 Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 0
Query: 42 GAAVLAHAIRKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLL 125
GA VL H+I+ A + S Y E+ A VHPS ASL +K L R+ P + IKG ++R++ CC E IKL+A L
Sbjct: 85 GAVVLRHSIKLAHESSRYGFEMYAFVHPSARECSASLNKVGYKSLIRNTPFEGDDIKGKFLREHVDGASCCGRKEYIKLYAYTL 168
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|551548787|ref|XP_005762036.1| (hypothetical protein EMIHUDRAFT_96850 [Emiliania huxleyi CCMP1516] >gi|485610914|gb|EOD09607.1| hypothetical protein EMIHUDRAFT_96850 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 65.855 bits (159), Expect = 1.055e-9 Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 0
Query: 27 IAYTISVAADGPYKDGAAVLAHAIRKAVKDSHYS---------------MELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGY-HLLSIWTWTLRFRNL 143
+A+ I + DGPY DGAAVLA A+ + + + S EL+A+V +VT + L + ++ L+R +P+ V I ++R A GCC A EL+KL A L Y +L + +L RNL
Sbjct: 66 VAFAIVLTKDGPYLDGAAVLAEAVMGSWRGPNSSSSGAPGGAASQPAVDYELVAIVARNVTASRPVLRFLGYRVLERPLPVAVADIAPGFLRDRIAARGCCGADELLKLWAYSLAEYSRVLLLDMDSLVLRNL 198
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|1210530617|dbj|GAX10568.1| (hypothetical protein FisN_14Lh067 [Fistulifera solaris]) HSP 1 Score: 64.6994 bits (156), Expect = 2.417e-9 Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 27 IAYTISVAADG---------PYKDGAAVLAHAIRKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLL 125
+AY +++ G P +GAAVL H+I++ ++Y+ ++ A+ HP +L ++ L+R+V + V+ I+G ++R + KNGCC EL+KL A L
Sbjct: 102 VAYVVTITGCGTPMRDEEPFPITEGAAVLQHSIQRQ-SSTNYNYQMYALYHPDAYACAQTLQPYGYRLLERNVLVSVEDIQGEFLRTHITKNGCCGEKELLKLEAYTL 208
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|299470207|emb|CBN79511.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 63.5438 bits (153), Expect = 6.104e-9 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 0
Query: 25 KRIAYTISVAADGPYKDGAAVLAHAIRKAVKDSHYSMELIAMVHPSVT-TTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYH 129
K +A+ IS+ +G + DGAAVLA +I A + S + +L+A +H + T L ++ + +PL + +I+ R AK GCC EL+KL A L YH
Sbjct: 61 KAVAFAISLTREGNHLDGAAVLAASIDAACETSEFLCDLVAFLHDEIGLGTENLLRRLGFRVMRPGLPLSLDEIEDPVTRGRIAKGGCCGLAELMKLFAYTLTEYH 166
BLAST of EWM26765.1 vs. NCBI_GenBank
Match: gi|397621694|gb|EJK66418.1| (hypothetical protein THAOC_12669 [Thalassiosira oceanica]) HSP 1 Score: 62.3882 bits (150), Expect = 1.441e-8 Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 0
Query: 11 NANAAGTQTNITEGKRIAYTISVAADGPYK-------DGAAVLAHAI-----RKAVKDSHYSMELIAMVHPSVTTTHASLTYASWKHLDRDVPLDVKKIKGTYMRKNSAKNGCCDALELIKLHACLLDGYHLL 131
+A G Q N T +IAY IS+ ++ D A VL H++ R S Y +L A+VH + L+ + L +D P+ + +I+G Y+RK+ K CC A E +KL+A ++G+ ++
Sbjct: 63 DAAGVGDQGNGTRPIQIAYAISLIRCSDFQSSTSGLLDAATVLRHSVHTQSVRNPASGSKYDYKLYAIVHTNAADCSNILSDLGYHVLMKDSPIQISEIRGDYLRKHVHKEWCCGADEFVKLYAYTIEGHPIV 195 The following BLAST results are available for this feature:
BLAST of EWM26765.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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