EWM26652.1, cds3992 (CDS) Nannochloropsis gaditana

Overview
NameEWM26652.1
Unique Namecds3992
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:605656..605790 -
Alignment locationCM002462.1:604226..605551 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26652.1
Productribosome biogenesis gtp-binding protein
Orig transcript idgnl|cribi|Naga_100001g116.8163.mrna
GenePYlqF
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:605656..605790 -
CM002462.1supercontigCM002462.1:604226..605551 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR023179GTP-bd_ortho_bundle
IPR027417P-loop_NTPase
IPR019991GTP-bd_ribosome_bgen
IPR006073GTP_binding_domain
Homology
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|585108740|gb|EWM26652.1| (ribosome biogenesis gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0
Query:    1 MSRRLLGNQQYHLRRFKGFTRPIYSAAYITIMMLFYRFSGAFINKVPICTTKLKNRPAALCTAAFTALGAGGRKSGEVQEPYFGFRPDEEDVSVSRHVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPPEMVDLEENKWAMAGEEIREEKRREKERRRELIERMDRKEILPIEAAPRERDTESNIEEKQGSERESRQQRPGEGESPKVGVGQFEGW 486
            MSRRLLGNQQYHLRRFKGFTRPIYSAAYITIMMLFYRFSGAFINKVPICTTKLKNRPAALCTAAFTALGAGGRKSGEVQEPYFGFRPDEEDVSVSRHVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPPEMVDLEENKWAMAGEEIREEKRREKERRRELIERMDRKEILPIEAAPRERDTESNIEEKQGSERESRQQRPGEGESPKVGVGQFEGW
Sbjct:    1 MSRRLLGNQQYHLRRFKGFTRPIYSAAYITIMMLFYRFSGAFINKVPICTTKLKNRPAALCTAAFTALGAGGRKSGEVQEPYFGFRPDEEDVSVSRHVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPPEMVDLEENKWAMAGEEIREEKRREKERRRELIERMDRKEILPIEAAPRERDTESNIEEKQGSERESRQQRPGEGESPKVGVGQFEGW 486          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|298714676|emb|CBJ27601.1| (PYlqF, plastid YlqF/RbgA-like GTPase [Ectocarpus siliculosus])

HSP 1 Score: 373.244 bits (957), Expect = 9.375e-121
Identity = 189/342 (55.26%), Postives = 241/342 (70.47%), Query Frame = 0
Query:   61 CTAAFTALGAGGRKSGEVQEPYFGFRPDEEDVSV-SRHVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSA--RAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPP 399
             + A  A G   ++ G   +P+     DE  ++   +HVINWYPGHIAKAER+LQD+L +VDVVVE RD RIP ATTH LV  WVG+RPLIV + R D A   A+++W  + V     RA +R G   VPV FVDS++G  +H +K  ALKAG+ VN+RR R G+ PRS+RVAVIG+PNVGKSA+IN+LIG+++AKS N PGVTK+++WVRLG      ++ E+ LELLDSPGIIPA+Q DQ  A KLA+CNDIGQASYD QVVA ++I+ L     + PGYV L  +  RY +DP   SGEEYLH +A K+Y G   SAAD+L+ DFRKGH G ++LE PP
Sbjct:  137 LSTAVMAAGWRDKEDGPAIDPF-----DEGKMNAQGQHVINWYPGHIAKAERQLQDYLNMVDVVVEVRDCRIPAATTHQLVPSWVGKRPLIVVLNRVDTASPTAVEQWKKYLVAEGGLRADNRGGN--VPVFFVDSKRGRGVHEIKKAALKAGSRVNDRRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNKPGVTKKMNWVRLGGK---DTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQVVAAKMIDQLVETAVQFPGYVSLDAVATRYGIDPRRHSGEEYLHLVAQKMYFGEKNSAADKLLGDFRKGHLGSLSLEAPP 468          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|546323848|ref|XP_005718199.1| (unnamed protein product [Chondrus crispus] >gi|507114788|emb|CDF38314.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 296.975 bits (759), Expect = 3.770e-93
Identity = 149/300 (49.67%), Postives = 199/300 (66.33%), Query Frame = 0
Query:   99 INWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIP 398
            I WYPGHIAKAER L++ +K+VDVVVE RD RIP AT HP V +W+G R  I+AM R D+AP  A  +W    V+              V F++++QG  +  LK +A+ AG+ VNE+R R GLLPR +R  VIGYPNVGKSA+IN+L+GR+ AKS N PGVT+   WVR+           + +ELLD PGIIPAK   Q +A +LA+C+DIGQA+YD QVVAG L+  L+RV     GY ++R LE+R+++    +SGEE++   A +LY+GN+   A RL+++FR G  GPV LE P
Sbjct:   93 IQWYPGHIAKAERTLKECIKMVDVVVEVRDCRIPLATAHPDVERWIGNRTRILAMNRADLAPEVARAQWRKHLVEQGEK----------VRFINAKQGRGVKELKKLAIDAGSFVNEKRTRKGLLPRPVRCLVIGYPNVGKSALINRLVGRKAAKSANKPGVTRNYQWVRI----------SDTIELLDMPGIIPAKLERQESAVRLAICDDIGQAAYDAQVVAGLLVEELKRVCEEYDGYFEMRTLEERFKVSADGVSGEEFVALAAERLYQGNIERTAVRLLTEFRAGILGPVALEKP 372          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|1200102352|ref|WP_087541765.1| (ribosome biogenesis GTPase YlqF [Nostocales cyanobacterium HT-58-2] >gi|1199830646|gb|ARV60460.1| ribosome biogenesis GTPase YlqF [Nostocales cyanobacterium HT-58-2])

HSP 1 Score: 278.87 bits (712), Expect = 2.533e-87
Identity = 139/304 (45.72%), Postives = 198/304 (65.13%), Query Frame = 0
Query:   97 HVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPPE 400
            ++I WYPGHIAKAE+ L++ LKLVDVV+E RDARIP AT HP + +WVG +  ++ + R DM      + W++++           Q  VP  F +++QG  +  +   A  AG A+NERR   G+LPR +R  VIG+PNVGKSA+IN+L+GRR+ +S   PGVT+++ WVR+           +ELELLD+PG+IPAK  DQ  A KLA+C+DIG+ASYD Q+VA  L+++L+ + A     +    L  RY+LDP + +GE YL ALA   Y+G++   A  +++DFR+G  G V LE+PPE
Sbjct:   10 NIIQWYPGHIAKAEKNLKENLKLVDVVLEVRDARIPLATHHPRISEWVGSKTRVLVLNRVDMILPQVRQVWTEWFK---------SQGEVPY-FTNAQQGQGVTAISKAAQAAGVAINERRKSRGMLPRPVRAVVIGFPNVGKSALINRLLGRRVVESAARPGVTRQLRWVRIS----------DELELLDAPGVIPAKLEDQEAALKLAICDDIGEASYDNQIVAAVLVDILKDIEANASDLLPKHPLRSRYKLDPTSFTGEAYLFALAEYRYKGDVEKTARAILTDFRQGSLGAVPLELPPE 293          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|515886507|ref|WP_017317090.1| (ribosome biogenesis GTPase YlqF [Mastigocladopsis repens])

HSP 1 Score: 278.485 bits (711), Expect = 2.761e-87
Identity = 138/304 (45.39%), Postives = 195/304 (64.14%), Query Frame = 0
Query:   97 HVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPPE 400
            ++I WYPGHIAKAE+ L++ LKLVDVV+E RDARIP AT HP + +WVG +  ++ + R DM      + W++++       +          F +++QG  +  +      AG A+NERR   G+LPR +R  VIG+PNVGKSA+IN+L+GRR+ +S   PGVT+++ WVR+           EELELLD+PG+IPAK  DQ  A KLA+C+DIG+ASYD Q+VA  L+++L+ + A  P  +    L  RY+LD  +LSGE YL ALA   Y+G++   A  L++DFRKG  G + LEIP +
Sbjct:   10 NIIQWYPGHIAKAEKNLKEQLKLVDVVLEVRDARIPLATHHPKISEWVGSKTRVLVLNRLDMILPQVRQVWTEWFKSHGEVPY----------FTNAQQGQGVTAISKATQAAGVAINERRKSRGMLPRPVRAVVIGFPNVGKSALINRLLGRRVVESAARPGVTRQLRWVRIS----------EELELLDAPGVIPAKLEDQQAALKLAMCDDIGEASYDNQMVAAALVDILKNIQANAPNLLPEHPLRSRYKLDSTSLSGEAYLFALAEYRYKGDVEKTARTLLTDFRKGLLGEIPLEIPAQ 293          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|873235534|emb|CEM00614.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 284.648 bits (727), Expect = 5.076e-87
Identity = 158/320 (49.38%), Postives = 211/320 (65.94%), Query Frame = 0
Query:   96 RHVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQP----------RVPVVFVDSRQGT-DIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDP-------CTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEI 397
            R  INWYPGHIAKA+R+L ++++LVDVV+E RDARIP AT HP+V  WVG RP I+ + R D+    A+++W  +   SA    RI              VPVV V++R+G   I R++   +K G AVN +R R GL PR++R  VIGYPNVGKSA+IN+LIGR+  KS NMPGVT++ISWVRL      +   E+++ELLD+PGIIPA Q DQ+ A++LA+CNDI QA+YDV      L++ L +   RRP YV +  L +RY +DP          +GE Y++ LA K + G++ SAA RL+SDF+KG  G VTLEI
Sbjct:  113 RKKINWYPGHIAKAQRQLLEYIRLVDVVIEVRDARIPLATGHPMVPLWVGNRPRIIVLNRCDLVAKEALQDWERYLKVSAARDSRIHNSTNGGGASPLPAVPVVPVNAREGGRGIPRIQKALVKVGEAVNAKRERKGLRPRAVRALVIGYPNVGKSALINRLIGRKKTKSYNMPGVTRQISWVRLRDRET-TGPVEKQVELLDTPGIIPANQEDQSAAWRLAMCNDISQAAYDVHEAGVALVDELLQAWKRRPSYVPVENLRRRYGVDPHYWGTDSANATGEFYMNQLAFKCFSGDINSAAGRLLSDFQKGRLGKVTLEI 431          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|1121324422|ref|WP_073634354.1| (ribosome biogenesis GTPase YlqF [Scytonema sp. HK-05] >gi|1115292097|gb|OKH55141.1| ribosome biogenesis GTPase YlqF [Scytonema sp. HK-05] >gi|1210128575|dbj|BAY47689.1| ribosome biogenesis GTP-binding protein YlqF [Scytonema sp. HK-05])

HSP 1 Score: 277.715 bits (709), Expect = 6.137e-87
Identity = 137/304 (45.07%), Postives = 196/304 (64.47%), Query Frame = 0
Query:   97 HVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPPE 400
            ++I WYPGHIAKAE+ L++ LK+VDVV+E RDARIP AT HP + +WVG +  ++ + R D+      + W+ ++       +          F +++QG  +  +   A  AG A+NERR   G+LPR++R  VIG+PNVGKSA+IN+L+GRR+ +S   PGVT+++ WVR+           EELELLD+PG+IPAK  +Q  A KLA+C+DIG+ASYD Q VA  L+++++      P ++    L  RY LDP  L+GE YLHALA   Y+G++   A  L++DFRKG  GP+ LE+PPE
Sbjct:   10 NIIQWYPGHIAKAEKNLKEHLKVVDVVLEVRDARIPLATHHPKMSEWVGSKTRVLVVNRLDIILPQVRQVWTQWFKSQGEVPY----------FTNAQQGQGVAAVSKAAQAAGVAINERRKSRGMLPRAVRAVVIGFPNVGKSALINRLLGRRVVESAARPGVTRQLRWVRIS----------EELELLDAPGVIPAKLENQEAALKLAICDDIGEASYDNQKVAAALVDIIKDGQTNDPDFLPEHPLRSRYTLDPTPLTGEAYLHALAEYRYKGDVEKTARTLLTDFRKGSLGPIPLELPPE 293          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|1208980016|ref|WP_088241149.1| (ribosome biogenesis GTPase YlqF [Calothrix rhizosoleniae])

HSP 1 Score: 275.018 bits (702), Expect = 8.094e-86
Identity = 137/302 (45.36%), Postives = 194/302 (64.24%), Query Frame = 0
Query:   97 HVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIP 398
            ++I WYPGHIAKAE++LQ+ LKLVDVV+E RDARIP AT HP V+QW+G +P ++ + R DM      + W D++ Q    A+          F +++QG  +  +      AG AVN+RR   G+LPR IR  VIG+PNVGKSA+IN+L+G+R+ +S   PGVT+++ WVR+           +ELELLD+PG+IP K  DQ  A KLA+C+DIGQASYD Q+VA   +++L  + A     +    L+ RY LD    +GE YLH LA   Y+G++   A +L++D+RKG+ G + LE+P
Sbjct:   10 NLIQWYPGHIAKAEKKLQEQLKLVDVVLEVRDARIPLATQHPQVKQWIGNKPRVLVLNRLDMITPQIQEVWKDWFKQEEEVAY----------FTNAQQGKGVAAVSKATQTAGMAVNKRRRDRGMLPRPIRAVVIGFPNVGKSALINRLVGKRVVESAARPGVTRQLRWVRIS----------KELELLDAPGVIPVKLEDQEAALKLAICDDIGQASYDNQLVAAGFVDILNYLQAVSSNLLPKEILKSRYDLDSINHTGEAYLHLLAEHRYQGDVERTARQLVTDYRKGYLGYIPLELP 291          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|1209851652|dbj|GAX44686.1| (GTP-binding protein HSR1-related protein [Tolypothrix sp. NIES-4075])

HSP 1 Score: 274.633 bits (701), Expect = 1.373e-85
Identity = 139/303 (45.87%), Postives = 200/303 (66.01%), Query Frame = 0
Query:   97 HVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIPP 399
            ++I WYPGHIAKAE++L++ LK VDVV+E RDARIP AT HP + +WVG +  ++ + R DM    A   W+D++        R G+  VP  F +++QG  ++ +   A  AG  +N+RR+  G+LPR +R  VIG+PNVGKSA+IN+L+G+R+ +S   PGVT+ + WVR+           E+LELLD+PG+IP K  DQ  A KLA+C+DIG+ASYD Q+VA  L ++L  + A     +  + LE RY+LDP T +GE YLHALA   ++G++   A +L++DFRKG  G + LE+PP
Sbjct:   10 NLIQWYPGHIAKAEKKLKEQLKRVDVVLEVRDARIPLATNHPQMTEWVGSKERVLVLNRVDMITPIARSLWTDWF-------QRQGE--VPY-FTNAQQGQGVNAVSKAAQAAGVEINKRRSDRGMLPRPVRAVVIGFPNVGKSALINRLVGKRVVESAARPGVTRSLRWVRIS----------EQLELLDAPGVIPLKLEDQEAALKLAICDDIGEASYDNQLVASALADLLLYLEAVATNVLPKKPLETRYELDPTTDTGEAYLHALAEHRFKGDVERTARQLLTDFRKGFLGTIPLELPP 292          
BLAST of EWM26652.1 vs. NCBI_GenBank
Match: gi|1210186736|dbj|BAZ05791.1| (ribosome biogenesis GTP-binding protein YlqF [Calothrix sp. NIES-3974])

HSP 1 Score: 274.248 bits (700), Expect = 1.580e-85
Identity = 139/302 (46.03%), Postives = 200/302 (66.23%), Query Frame = 0
Query:   97 HVINWYPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPLIVAMTRKDMAPSAAIKEWSDFYVQSARAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQVVAGELINMLRRVHARRPGYVDLRRLEQRYQLDPCTLSGEEYLHALAAKLYRGNLYSAADRLMSDFRKGHFGPVTLEIP 398
            ++I WYPGHIAKAE+ LQ+ LK VDVV+E RDARIP  T HP V +WVG +P I+ + R DM      + W  ++ QS           VP  F +++QG  ++ +   A +AG ++NERR   G+LPR IR  VIG+PNVGKSA+IN+L+ RR+ +S   PGVT+++ WVR+           ++L+LLD+PG+IPAK  DQ  A KLA+C+DIG+ASYD Q++A  L++++  + A  P Y+  + L  RY+L+P  L+G+EYLHALA   Y G++  AA +L++D+RKG  G + LE+P
Sbjct:   10 NLIQWYPGHIAKAEKALQENLKKVDVVLEVRDARIPITTHHPHVPEWVGNKPRILVINRFDMVLPVVRQAWEKWF-QS--------HDEVPY-FTNAQQGQGVNAVAKAAQEAGVSLNERRKSRGMLPRPIRAVVIGFPNVGKSALINRLLNRRVVESAARPGVTRQLRWVRIS----------DQLDLLDAPGVIPAKLEDQEAALKLAICDDIGEASYDKQLIAAGLVDIITYLEATNPEYLPKQPLRSRYELEPGNLTGDEYLHALADHKYNGDVERAARQLLTDYRKGMLGSIPLELP 291          
The following BLAST results are available for this feature:
BLAST of EWM26652.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108740|gb|EWM26652.1|0.000e+0100.00ribosome biogenesis gtp-binding protein [Nannochlo... [more]
gi|298714676|emb|CBJ27601.1|9.375e-12155.26PYlqF, plastid YlqF/RbgA-like GTPase [Ectocarpus s... [more]
gi|546323848|ref|XP_005718199.1|3.770e-9349.67unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|1200102352|ref|WP_087541765.1|2.533e-8745.72ribosome biogenesis GTPase YlqF [Nostocales cyanob... [more]
gi|515886507|ref|WP_017317090.1|2.761e-8745.39ribosome biogenesis GTPase YlqF [Mastigocladopsis ... [more]
gi|873235534|emb|CEM00614.1|5.076e-8749.38unnamed protein product [Vitrella brassicaformis C... [more]
gi|1121324422|ref|WP_073634354.1|6.137e-8745.07ribosome biogenesis GTPase YlqF [Scytonema sp. HK-... [more]
gi|1208980016|ref|WP_088241149.1|8.094e-8645.36ribosome biogenesis GTPase YlqF [Calothrix rhizoso... [more]
gi|1209851652|dbj|GAX44686.1|1.373e-8545.87GTP-binding protein HSR1-related protein [Tolypoth... [more]
gi|1210186736|dbj|BAZ05791.1|1.580e-8546.03ribosome biogenesis GTP-binding protein YlqF [Calo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4002rna4002Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications