EWM26699.1, cds3990 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|585108787|gb|EWM26699.1| (hypothetical protein Naga_100001g118 [Nannochloropsis gaditana]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 Query: 1 MDFSSLLESLRVSPVLALALFVLLLLIASVQLSTRVTHFYPSTLELCSLYGKLLVSPLYKTWRWKSKLRRDMRLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTRKGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQAAREERQ 368 MDFSSLLESLRVSPVLALALFVLLLLIASVQLSTRVTHFYPSTLELCSLYGKLLVSPLYKTWRWKSKLRRDMRLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTRKGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQAAREERQ Sbjct: 1 MDFSSLLESLRVSPVLALALFVLLLLIASVQLSTRVTHFYPSTLELCSLYGKLLVSPLYKTWRWKSKLRRDMRLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTRKGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQAAREERQ 368
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|929769232|ref|XP_014159549.1| (hypothetical protein SARC_02168 [Sphaeroforma arctica JP610] >gi|906957266|gb|KNC85647.1| hypothetical protein SARC_02168 [Sphaeroforma arctica JP610]) HSP 1 Score: 119.013 bits (297), Expect = 3.480e-27 Identity = 92/314 (29.30%), Postives = 148/314 (47.13%), Query Frame = 0 Query: 19 ALFVLLLLIASVQLSTRVTHFYPSTLELCSLYGKLLVSPLYKTWRWKSKLR-RDMRLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAE--DLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWE-PLKMQQKYEGLLKVQETVKFTRKGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNP--PQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVK 326 +LF+ ++ IA V ++ P + YGK ++ + K WK K++ D +L + + + D N+ Y ++ G+Q K + ++P Y + + L + Y FP+LG +HV N+ R E L++ + + KV E V+ +++G V + L++ +G W ST TVL RNP P D +I E +G VV E+ F A GR++AAV DYNPIH+ A+L GFR+AI HG+Y E ++ A+ T F RP F+ + VV+ Sbjct: 4 SLFMCIVYIALVTVAAGYIFGVPVAIRA---YGKAAIASVSKRG-WKKKVQSEDFKLSSTITNEFEWTPDAGNLAAYSKVLGVQAKCIEKFGEIPVLYPQTQMFMSLIERLCEADYPFPLLGMVHVSNFVRQERALRVDETFTSKFKVCEAVRNSKRGTIVEYQSHLVDAEGLIPWTSTMTVLHVHRNPLTPDDVKNAI--------------EVPVEGDDVV---EKPFLLAESAGRKYAAVSGDYNPIHMHGMLAKLMGFRKAIAHGLYTIGTVNAEIMNTTPAKFPIVT-----QAYFKRPAFLPSKNVVR 291
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|585106667|gb|EWM25031.1| (acyl dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 119.398 bits (298), Expect = 8.286e-27 Identity = 96/311 (30.87%), Postives = 139/311 (44.69%), Query Frame = 0 Query: 39 FYPSTLELCSLYGKLLVSPLYKTWRWKSKLRRD--MRLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAE--DLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHN-YFRWEPLKMQQKYEGLLKVQETVKFTRKGAEVTFPQVLLNEQGREVWRSTTTVLV-PCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAW-RAEG-GEATTVMEADVKFIRPCFVGN--GF-VVKIWRVEDKAAEAG 338 FYPS L KLL L K +WK ++++ D L+ +L +V +++C L + LPF Y A +YP L ++ Y FP +G +HV N PL ++++Y LLKV VK +KG EVTF L ++ G VW + +T LV R P+ E P + V + A+ GR++AAV KD NPIH +A+ FGF I HGMY A E +++G G+ +E KF+RP + + GF V I E +G Sbjct: 54 FYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPV-------------MNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSG 351
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|1130982635|ref|WP_075745413.1| (acyl dehydratase [Pseudomonas alcaliphila] >gi|1130044585|gb|APU28859.1| acyl dehydratase [Pseudomonas alcaliphila JAB1]) HSP 1 Score: 102.834 bits (255), Expect = 1.812e-21 Identity = 90/304 (29.61%), Postives = 140/304 (46.05%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTR-----KGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R PN+ + DP ++ +Y Q+C + ++ LP Y + LL+ RR+ FP+LG +H+ N R + + GL Q +V+ T KGA + L ++ G +W + +L CR D + + AE P + L D + ADTGRR+A V DYNPIHL+ +ARLFGF RAI HG++ A +L A +A +A V+E V+F +P + ++ + A RL+ G+ DT HM + Q Sbjct: 20 RAALRRKVTGRQLPNIGLRCRVEVDPQHLARYRQVCAI---ADSPYLPPVYPHVLAFSLQMKLLTDRRFPFPLLGLVHLENRIR-----VLRPLGGLGPFQISVQVTDLQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLDGQSPLRAEQSPLELTPLAD----------------WGAPADTGRRYARVAGDYNPIHLYAATARLFGFPRAIAHGLWNKA----RSLAALQAHLPQAGYVVE--VRFQKPVLLPTHVALQ---ASEPGANGQFRLI------GESDTPHMAGSWQ 281
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|516274822|ref|WP_017678785.1| (acyl dehydratase [Pseudomonas alcaliphila]) HSP 1 Score: 100.908 bits (250), Expect = 8.967e-21 Identity = 90/304 (29.61%), Postives = 137/304 (45.07%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTR-----KGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R PN+ + DP ++ +Y Q+C + ++ LP Y + LL+ RR+ FP+LG +H+ N R + + GL Q +V+ T KGA + L ++ G +W + +L CR D + AE P + L D + ADTGRR+A V DYNPIHL+ +ARLFGF RAI HG++ A +L AL A + G DV+F +P + ++ + A RL+ G+ DT HM + Q Sbjct: 20 RAALRRKVTGRQLPNIGLRCRVDVDPKHLARYRQVCAI---ADSPYLPPVYPHVLAFGLQMQLLTDRRFPFPLLGLVHLENRIR-----VLRPMGGLGPFQISVQVTDLQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLDGQAPLRAEQPPLELAPLAD----------------WAAPADTGRRYARVAGDYNPIHLYAVTARLFGFPRAIAHGLWNKARSL-AALHAHLPQAGYVV-----DVRFQKPVLLPTHIALQ---ASEPGASGQFRLI------GEGDTPHMAGSWQ 281
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|947224206|ref|WP_055984147.1| (acyl dehydratase [Pseudomonas sp. Leaf83] >gi|944793381|gb|KQO44155.1| acyl dehydratase [Pseudomonas sp. Leaf83] >gi|1086970344|emb|SDD13036.1| MaoC like domain-containing protein [Pseudomonas chengduensis]) HSP 1 Score: 100.138 bits (248), Expect = 1.557e-20 Identity = 90/304 (29.61%), Postives = 136/304 (44.74%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTR-----KGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R PN+ + P ++ Y Q+C + ++ LP Y + LL+ RR+ FP+LG +H+ N R + + GL Q +V+ T KGA + L ++ G +W + +L CR D + AE P + M L D + ADTGRR+A V DYNPIHL+ +ARLFGF RAI HG++ A +L AL A + G DV+F +P + ++ + A RL+ G+ DT HM + Q Sbjct: 20 RAALRRKVTGRQLPNIGLRCRVDVAPKHLAHYRQVCAI---ADSPYLPPVYPHVLAFGLQMQLLTDRRFPFPLLGLVHLENRIR-----VLRPMGGLGPFQISVQVTDLQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLDGQAPLRAEQPPLELMPLAD----------------WAAPADTGRRYARVAGDYNPIHLYAVTARLFGFPRAIAHGLWNKARSL-AALHAHLPQAGYVV-----DVRFQKPVLLPTHIALQ---ASEPGASGQFRLI------GEGDTPHMAGSWQ 281
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|786039930|ref|WP_045734028.1| (acyl dehydratase [Pseudomonas pseudoalcaligenes] >gi|782985000|gb|KJU76274.1| acyl dehydratase [Pseudomonas pseudoalcaligenes]) HSP 1 Score: 99.3673 bits (246), Expect = 3.017e-20 Identity = 91/304 (29.93%), Postives = 138/304 (45.39%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTR-----KGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R PN+ + DP ++ +Y Q+C + ++ LP Y + LL+ RR+ FP+LG +H+ N R + + GL Q +V+ T KGA + L ++ G +W + +L CR D + + AE P + L D + ADTGRR+A V DYNPIHL+ +ARLFGF RAI HG++ A +L AL A G A +V+F +P + V +A+E G + +G DT HM + Q Sbjct: 20 RAALRRKVTGRQLPNIGLRCRVEVDPQHLARYRQVCAI---ADSPYLPPVYPHVLAFSLQMKLLTDRRFPFPLLGLVHLENRIR-----VLRPLGGLGPFQISVQVTDLQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLDGQSPLRAEQSPLELTPLAD----------------WGAPADTGRRYARVAGDYNPIHLYAATARLFGFPRAIAHGLWNKARSL-AALQAHLPPAGYAV-----EVRFQKPVLLPT-------HVALQASEPGANGQFSLIGEG--DTPHMAGSWQ 281
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|754584741|ref|WP_041976742.1| (acyl dehydratase [Pseudomonas mendocina]) HSP 1 Score: 99.3673 bits (246), Expect = 3.471e-20 Identity = 92/304 (30.26%), Postives = 136/304 (44.74%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTR-----KGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R P+L + P ++ +Y Q+CGL E+ LP Y + LL+ RR+ FP+LG +H+ N R + + GL Q +V+ T KGA + L ++ G +W + +L CR D E P + LVD + ADTGRR+A V DYNPIHL+ +ARLFGF RAI HG++ A +L AL A G E V+F +P + ++ + +A RL+ G+ DT HM + Q Sbjct: 20 RAALRRKVTGRQLPDLGLRCRVDVAPKHLARYRQVCGL---AESAYLPPVYPHILAFPLQMQLLTDRRFPFPLLGLVHLENRIR-----VLRPLGGLGPFQVSVQVTDLQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLDGQPQPRTEQEPLSLVPLVD----------------WAAPADTGRRYARVAGDYNPIHLYALTARLFGFPRAIAHGLWNKARSL-GALQAHLPLAG-----YEVQVRFQKPVLLPTHLALQ---ASEPSASGQFRLI------GENDTPHMAGSWQ 281
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|1160945758|ref|WP_079784640.1| (acyl dehydratase [Pseudomonas sp. LPH1] >gi|1160546078|gb|AQZ35056.1| acyl dehydratase [Pseudomonas sp. LPH1]) HSP 1 Score: 98.5969 bits (244), Expect = 5.841e-20 Identity = 93/308 (30.19%), Postives = 140/308 (45.45%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFRWEPLKMQQKYEGLLKVQETVKFTR-----KGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGK----RLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R PN+ + DP ++ +Y Q+C + ++ LP Y + LL+ RR+ FP+LG +H+ N R + + GL Q +V+ T KGA + L ++ G +W + +L CR + + AE P + L D + ADTGRR+A V DYNPIHL+ +ARLFGF RAI HG++ A +L A A +A V+E V+F +P + V +A+E G RL+ G+ DT HM T Q Sbjct: 20 RAALRRKVTGRQLPNIGLRCRVEVDPRHLARYRQVCAI---ADSPYLPPVYPHVLAFGLQMKLLTDRRFPFPLLGLVHLENRVR-----VLRPLGGLGPFQISVQVTDLQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLEGQAPLRAEQPPLELTPLAD----------------WDAPADTGRRYARVAGDYNPIHLYAATARLFGFPRAIAHGLWNKA----RSLAALHAHLPQAGYVVE--VRFQKPVLLPT-------HVALQASEPGPSGQFRLI------GENDTPHMAGTWQ 281
BLAST of EWM26699.1 vs. NCBI_GenBank
Match: gi|489335438|ref|WP_003242666.1| (acyl dehydratase [Pseudomonas mendocina] >gi|400345971|gb|EJO94331.1| dehydratase [Pseudomonas mendocina DLHK]) HSP 1 Score: 98.2117 bits (243), Expect = 9.345e-20 Identity = 90/300 (30.00%), Postives = 138/300 (46.00%), Query Frame = 0 Query: 65 KSKLRRDM--RLDPNLAFKLPFAADPMNVQQYVQMCGLQGKVEAEDLPFAYVASSFLYPTVCLLSQRRYLFPVLGGIHVHNYFR-WEPLKMQQKYEGLLKVQETVKFTRKGAEVTFPQVLLNEQGREVWRSTTTVLVPCRNPPQDPSTSIGAEAVPTKRMSLVDECRSQGLKVVLVRERAFKTAADTGRRFAAVVKDYNPIHLFTWSARLFGFRRAICHGMYVGALALEEALDAWRAEGGEATTVMEADVKFIRPCFVGNGFVVKIWRVEDKAAEAGKRLVVMVAQQGKEDTVHMQATVQ 361 ++ LRR + R P+L + DP ++ +Y Q+CGL E+ LP Y + LL+ RR+ FP+LG +H+ N R PL ++ ++V + ++ KGA + L ++ G +W + +L CR + AE P L D + ADTGRR+A V DYNPIHL+ +A+LFGF RAI HG++ A +L AL A G E +V+F +P + ++ + AA RL+ G+ DT HM + Q Sbjct: 20 RAALRRKVTGRQLPDLGLRCRVDIDPQHLARYRQVCGL---AESAYLPPVYPHILAFPLQMQLLTDRRFPFPLLGLVHLENRIRVLRPLGGLGPFQVSVQVSD-LQPHDKGATFSLITRLEDQLGL-LWEGDSRIL--CRALRLEGQPQPRAEQEPLPLAPLAD----------------WAVPADTGRRYARVAGDYNPIHLYAVTAKLFGFPRAIAHGLWNKAGSL-GALQAHLPLAG-----YEVEVRFQKPVLLPTHVALQ---ASEPAASGQFRLI------GENDTPHMAGSWQ 281 The following BLAST results are available for this feature:
BLAST of EWM26699.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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