EWM26745.1, cds3973 (CDS) Nannochloropsis gaditana

Overview
NameEWM26745.1
Unique Namecds3973
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:556902..558953 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26745.1
Productactivating signal cointegrator 1 complex subunit 2
Orig transcript idgnl|cribi|Naga_100001g137.8256.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:556902..558953 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like
IPR003892CUE
Homology
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|585108833|gb|EWM26745.1| (activating signal cointegrator 1 complex subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 1386.7 bits (3588), Expect = 0.000e+0
Identity = 683/683 (100.00%), Postives = 683/683 (100.00%), Query Frame = 0
Query:    1 MNPRLPGGLDTPLADMWRSAPIGELPPYLPQDNGCRLEAGLLKMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQVPSFATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSDLEGAVASGSGDGETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVGGVVAGLLALARTREGALEALFTFISELIQTTDADEEADEGGQGMGRLVRDCAGGLLSRLQAFLSAPADEQRPAPDMSGVSYLIELLRSTTGGYEAPTPRTGLFIKEPRAGRGAEGERRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKKGGEEAEEARDEEFIARQKAYLRQMEKDAEEDAYLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGESAAQGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRKSGVNL 683
            MNPRLPGGLDTPLADMWRSAPIGELPPYLPQDNGCRLEAGLLKMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQVPSFATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSDLEGAVASGSGDGETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVGGVVAGLLALARTREGALEALFTFISELIQTTDADEEADEGGQGMGRLVRDCAGGLLSRLQAFLSAPADEQRPAPDMSGVSYLIELLRSTTGGYEAPTPRTGLFIKEPRAGRGAEGERRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKKGGEEAEEARDEEFIARQKAYLRQMEKDAEEDAYLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGESAAQGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRKSGVNL
Sbjct:    1 MNPRLPGGLDTPLADMWRSAPIGELPPYLPQDNGCRLEAGLLKMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQVPSFATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSDLEGAVASGSGDGETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVGGVVAGLLALARTREGALEALFTFISELIQTTDADEEADEGGQGMGRLVRDCAGGLLSRLQAFLSAPADEQRPAPDMSGVSYLIELLRSTTGGYEAPTPRTGLFIKEPRAGRGAEGERRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKKGGEEAEEARDEEFIARQKAYLRQMEKDAEEDAYLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGESAAQGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRKSGVNL 683          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|700372541|ref|XP_009943762.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Opisthocomus hoazin])

HSP 1 Score: 131.339 bits (329), Expect = 4.972e-28
Identity = 176/729 (24.14%), Postives = 289/729 (39.64%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSDL--------EGA----------VASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVG-GVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTP------------RTGLFIKEPRAGRGAEGE-------RRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEEA-------RDEEFIARQKAYLRQMEKDAEE------DAYLL-QEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYN--NLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGESAAQGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRK 678
            K  A  L  LL +    F   ++++  L+  LD+YL YAPR ++A +D     +D           ++  LHRSV L +LR  T  E +Q    PS F  +   + + DIP+ LDLC L+G    GLL + ++  I   +    S L +   +V ++FS++        EGA          V    G+    E +D + YL D    L   +   PL           +  L   Y++ I   E+  + R    N   A  +   +    + +    ++   + L    E + E +  FI E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E + R      + P P             T   ++E  A   +E E         V+     +++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDR++       P+PL                     D  R + G+   E         D+  +A QK    Q     EE      +A L  ++Y+D++DD Y G Q   +  ++ ++  + R +    ++R + +     EG Q ++ E      +  + ++      ++P    +   +   +F      K       G+        A+G G++  T        RR+KE  K  RANHNR+V A RK
Sbjct:   60 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLCYAPRKFDALLDCHPDVND-----------MQKCLHRSVFLTFLRMSTHKESKQHFITPSVFGEIIYNNFLFDIPKILDLCVLFG-KGNGLLLQKMIENIFTQQPSYFSDLNETLPTVLQVFSNILHKCGLQCEGASAEPQKLEERVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYR-LASFYELAIPELESAVKKRHYEDNSVFADLWRRISHSRKKMIEAFHILINQVCLQPILESSCENIQPFIEEFLQIFTSVLQER--------RFLRDYDELFPVEDDISLLQQ-ASSTLDETRTAYILQAVESAWEGVDRKKAQVVKDPPPPAASNGASAMVESTAEDVEELGAAYASEDECAGAAAALTVKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSVDVSRIQKGKRTREKDTTRSLLNDKRLVAEQKERYSQYSVVVEEIPVQPGEAQLYGEDYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRPKGQ-----EGAQEEEEEDEEEEEEEAEKERTKDHFVQDPAVLRERAEARRQAFLARRGHKHDGSAVVGN--------AKGHGQNRETVQ-----ERRKKEANKSTRANHNRRVMADRK 747          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|663284911|ref|XP_008499729.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Calypte anna])

HSP 1 Score: 130.568 bits (327), Expect = 7.749e-28
Identity = 174/726 (23.97%), Postives = 284/726 (39.12%), Query Frame = 0
Query:   46 ARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSDL--------EGAVAS-------------GSGDGETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARAL-VGGVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTPRTGLFIKEPRAGRGAEGERRVQRPARS------------------VEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLR-KKGGEEAEEAR----DEEFIARQKAYLRQMEKDAEEDA-YLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINA---REKSRVRGTSGSLLSRG---ESAA-----QGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRK 678
            A  L  LL +    F   ++++  L+  LD+YL++APR ++A  D     +D           ++  LHR V L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G  +  LL +++   I   +    S L++   +V ++F+D+        EGA A                   E +D + +L D +  L   +   PL S         +  L   Y++ I   E+  + R    N   A  +   +    + + +  ++   + L    E + E +  F+ E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E   R  T G E PT  +            AE    +  P  S                  +++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +P  LD LDR++       P+PL                     D  R +KG  E +  R    D++ +A QK   RQ     EE    L Q+Y+D++DD Y G Q   +  ++ ++  + R +                       +P + R    ++       +E              F  +    RE++  R     L+ +G   ES+A     +G G++  T+       RR+KE  K  RANHNR+V A RK
Sbjct:   63 ADDLNWLLALPHEKFWCQVVFDETLQKCLDSYLHHAPRKFDALWDCHPEVND-----------MQRCLHRRVFLTFLRMSTHKESKDHFITPSGFGEIIYNNFLFDIPKILDLCVLFGKGNGPLLQKMIEN-IFTQQPSYYSDLDETLHTVLQVFNDILTKCGLQCEGASAEPQRLEERANVTPENMPCQELKDIVLFLCDTSTTLWAFLDVFPLASQTFKKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVYADLWRRISHSRKKMIEIFHILINQVCLQPILESSCENIQPFVEEFLQIFTSVLQER--------RFLRDYDELFPIEDDVSLLQQ-ASSTLDETRTAYILQAVESAWEGADRKKTQGLEDPTLASASHGASAMVESTAEDMEELGAPYASEDECAGAAAPMAKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVP-SLDKLDRAMQRQLKPDPTPLVTSRSNVFQNDEFDVFSRDSVDISRIQKGKREKDTTRSLLNDKQLVAEQKERYRQYSLVVEEVVEQLYQDYEDEYDDTYDGNQVGANDADSDDELISRRPFT----------------------VPQVLRPKGQEEGQEEEDEEEEDEEEVEKERTKDHFVQDPAVLRERAEAR-RQMHLVRKGHKQESSAVVGNVKGHGQNRETTQ-----ERRKKEANKSTRANHNRRVLADRK 737          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|663284907|ref|XP_008499727.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Calypte anna])

HSP 1 Score: 128.642 bits (322), Expect = 3.757e-27
Identity = 172/727 (23.66%), Postives = 283/727 (38.93%), Query Frame = 0
Query:   46 ARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSDL--------EGAVAS-------------GSGDGETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARAL-VGGVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTPRTGLFIKEPRAGRGAEGERRVQRPARS------------------VEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEE------ARDEEFIARQKAYLRQMEKDAEEDA-YLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINA---REKSRVRGTSGSLLSRG---ESAA-----QGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRK 678
            A  L  LL +    F   ++++  L+  LD+YL++APR ++A  D     +D           ++  LHR V L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G  +  LL +++   I   +    S L++   +V ++F+D+        EGA A                   E +D + +L D +  L   +   PL S         +  L   Y++ I   E+  + R    N   A  +   +    + + +  ++   + L    E + E +  F+ E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E   R  T G E PT  +            AE    +  P  S                  +++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +P  LD LDR++       P+PL                     D  R + G+  E+        D++ +A QK   RQ     EE    L Q+Y+D++DD Y G Q   +  ++ ++  + R +                       +P + R    ++       +E              F  +    RE++  R     L+ +G   ES+A     +G G++  T+       RR+KE  K  RANHNR+V A RK
Sbjct:   63 ADDLNWLLALPHEKFWCQVVFDETLQKCLDSYLHHAPRKFDALWDCHPEVND-----------MQRCLHRRVFLTFLRMSTHKESKDHFITPSGFGEIIYNNFLFDIPKILDLCVLFGKGNGPLLQKMIEN-IFTQQPSYYSDLDETLHTVLQVFNDILTKCGLQCEGASAEPQRLEERANVTPENMPCQELKDIVLFLCDTSTTLWAFLDVFPLASQTFKKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVYADLWRRISHSRKKMIEIFHILINQVCLQPILESSCENIQPFVEEFLQIFTSVLQE--------RRFLRDYDELFPIEDDVSLLQQ-ASSTLDETRTAYILQAVESAWEGADRKKTQGLEDPTLASASHGASAMVESTAEDMEELGAPYASEDECAGAAAPMAKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVP-SLDKLDRAMQRQLKPDPTPLVTSRSNVFQNDEFDVFSRDSVDISRIQKGKRREKDTTRSLLNDKQLVAEQKERYRQYSLVVEEVVEQLYQDYEDEYDDTYDGNQVGANDADSDDELISRRPFT----------------------VPQVLRPKGQEEGQEEEDEEEEDEEEVEKERTKDHFVQDPAVLRERAEAR-RQMHLVRKGHKQESSAVVGNVKGHGQNRETTQ-----ERRKKEANKSTRANHNRRVLADRK 738          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|695149706|ref|XP_009502470.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Phalacrocorax carbo])

HSP 1 Score: 127.487 bits (319), Expect = 8.637e-27
Identity = 171/751 (22.77%), Postives = 278/751 (37.02%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSD------------------LEGAVASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVG-GVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIELLRSTTGGYEAPTPRTGLFIKEPRAGRGAEGERRVQR-------------------------PARSV-----EAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEE------ARDEEFIARQKAYLRQMEKDAEE------DAYLLQE-YDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGES------AAQGRGED---------GATSHPMSALARRRKEKQKHLRANHNRKVKAVRK 678
            K  A  L  LL +    F   ++++  L+  LD+YL YAPR ++A +D     +D           ++  LHRSV L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G    GLL + ++  I   +    S L++   +V ++F++                  LE  V    G+    E +D + YL D    L   +   P+           +  L   Y++ I   E+  + R    N   A  +   +    + +    ++   + L    E + E +  FI E +Q  T   +E         R +RD          +S LQ   S+  DE R A           +L++  G +E    +    +K+P     + G   +                           P   V     ++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDR++       P+PL                     D  R + G+  E+        D+  IA QK   RQ     EE      +A L +E Y+D++DD Y G Q   +  ++ ++  + R +                       +P + R         +G+ +  +   +             R K         L  R E+      A +G   D         G   +  +   RR+KE  K  RANHNR+V A RK
Sbjct:   60 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLCYAPRKFDALLDCHPEVND-----------MQKRLHRSVFLTFLRMSTHKESKDHFITPSVFGEIIYNNFLFDIPKILDLCVLFG-KGNGLLLQKMIENIFTQQPSYFSDLDETLPTVLQVFNNILHKCGLRCGGASAEPQKLEEKVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPMACQTFQKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKKMIEAFHILINQVCLQPILESSCENIQPFIEEFLQIFTSVLQER--------RFLRDYDELFPVEDDVSLLQQ-ASSTLDETRTA----------YILKAVEGAWEGVDRKKAQVVKDPTPPAASNGASAIVESTTEDMEELGAAYASGDECAGAAAAPVVKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSVDLSRIQKGKRREKDTTRSLLNDKRLIAEQKERYRQYSVIVEEIPVPQGEAQLYKEDYEDEYDDTYDGNQVGANDADSDDELISRRPFT----------------------IPQVLR--------PKGQEEGEEEEEEDGEEEEEEAAEKERTKDHFVQDPAVLRERAEARRLAYLARKGHKHDSSAVVGNVKGHGQNRETVQERRKKEANKSTRANHNRRVMADRK 747          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|729731529|ref|XP_010561633.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Haliaeetus leucocephalus])

HSP 1 Score: 126.331 bits (316), Expect = 1.956e-26
Identity = 148/585 (25.30%), Postives = 232/585 (39.66%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSD------------------LEGAVASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVG-GVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTP------------RTGLFIKEPRAGRGAEGE-------RRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEE------ARDEEFIARQKAYLRQMEKDAEE------DAYLLQE-YDDDFDDQYSGEQT 537
            K  A  L  LL +    F   ++++  L+  LD+YL YAPR ++A +D            L  V  ++  LH+SV L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G    GLL + ++  I   +    S L++   +V ++F++                  LE  V    G+    E +D + YL D    L   +   PL           +  L   Y++ I   E+  + R    N   A  +   +    R +    ++   + L    E +LE +  FI E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E + R      + PTP             T   I+E  A   +E E          +     +++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDR++       P+PL                     D  R + G+  E+        D+  +A QK    Q     EE      +A L +E Y+D++DD Y G Q 
Sbjct:   94 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLRYAPRKFDALLD-----------CLPEVNDMQKCLHQSVFLTFLRMSTHKESKDHFITPSVFGEIIYNNFLFDIPKILDLCVLFG-KGNGLLLQKMIENIFTQQPSYFSDLDETLPTVLQVFNNILHKCGLQCEGASAEPQKLEEKVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKRMIEAFHILINQVCLQPILESSLENIQPFIEEFLQIFTSVLQE--------RRFLRDYDELFPVEDDVSLLQQ-ASSTLDETRTAYILQAVESAWEGVDRRKAQVVKDPTPLAASNGASAIVESTAEDIEELGAAYASEDECAGAAAAPIAKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSVDVSRIQKGKRREKDTTRSLLNDKRLVAEQKERYSQYSVIVEEIPVQQGEAQLYKEDYEDEYDDTYDGNQV 655          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|729731532|ref|XP_010561634.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Haliaeetus leucocephalus] >gi|729731534|ref|XP_010561635.1| PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Haliaeetus leucocephalus] >gi|729731536|ref|XP_010561636.1| PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Haliaeetus leucocephalus])

HSP 1 Score: 126.331 bits (316), Expect = 1.956e-26
Identity = 148/585 (25.30%), Postives = 232/585 (39.66%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSD------------------LEGAVASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVG-GVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTP------------RTGLFIKEPRAGRGAEGE-------RRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEE------ARDEEFIARQKAYLRQMEKDAEE------DAYLLQE-YDDDFDDQYSGEQT 537
            K  A  L  LL +    F   ++++  L+  LD+YL YAPR ++A +D            L  V  ++  LH+SV L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G    GLL + ++  I   +    S L++   +V ++F++                  LE  V    G+    E +D + YL D    L   +   PL           +  L   Y++ I   E+  + R    N   A  +   +    R +    ++   + L    E +LE +  FI E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E + R      + PTP             T   I+E  A   +E E          +     +++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDR++       P+PL                     D  R + G+  E+        D+  +A QK    Q     EE      +A L +E Y+D++DD Y G Q 
Sbjct:   60 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLRYAPRKFDALLD-----------CLPEVNDMQKCLHQSVFLTFLRMSTHKESKDHFITPSVFGEIIYNNFLFDIPKILDLCVLFG-KGNGLLLQKMIENIFTQQPSYFSDLDETLPTVLQVFNNILHKCGLQCEGASAEPQKLEEKVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKRMIEAFHILINQVCLQPILESSLENIQPFIEEFLQIFTSVLQER--------RFLRDYDELFPVEDDVSLLQQ-ASSTLDETRTAYILQAVESAWEGVDRRKAQVVKDPTPLAASNGASAIVESTAEDIEELGAAYASEDECAGAAAAPIAKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSVDVSRIQKGKRREKDTTRSLLNDKRLVAEQKERYSQYSVIVEEIPVQQGEAQLYKEDYEDEYDDTYDGNQV 621          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|723122894|ref|XP_010290138.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Phaethon lepturus])

HSP 1 Score: 125.946 bits (315), Expect = 2.257e-26
Identity = 146/588 (24.83%), Postives = 231/588 (39.29%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSD------------------LEGAVASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVG-GVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTP---------------RTGLFIKEPRAGRGAEGE-------RRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEE------ARDEEFIARQKAYLRQMEKDAEE------DAYLLQE-YDDDFDDQYSGEQT 537
            K  A  L  LL +    F   ++++  L+  LD+YL YAPR ++A +D     +D           ++  LHRSV L +LR  T  E       PS F  +   + + DIP+ LDLC L+G    GLL + ++  I   +    S L++   +V ++F++                  LE  V    G+    E +D + YL D    L   +   PL           +  L   Y++ I   E+  + R    N   A  +   +    + +    ++   + L    E + E +  FI E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E + R      + P P               R    ++E RA   +EGE          +     +++++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDR++       P+PL                     D  R + G+  E+        D+  +A QK    Q     EE      +A L +E Y+D++DD Y G Q 
Sbjct:   60 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLCYAPRKFDALLDCHPEVND-----------MQKCLHRSVFLTFLRMSTHKESNDHFITPSVFGEIIYNNFLFDIPKILDLCVLFG-KGNGLLLQKMIENIFTQQPSYFSDLDETLPTVLQVFNNVLHKCGLQCEGASAEPQKLEEKVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKKMIEAFHILINQVCLQPILESSCENIQPFIEEFLQIFTSVLQE--------RRFLRDYDELFPVEDDVSLLQQ-ASSTLDETRTAYILQAVESAWEGVERKKAQAVKDPAPPAASNGASAIVEQSARAAEDMEELRAAYASEGECAGAAAAPIAKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSVDVSRIQKGKRREKDTTKSLLNDKRLVAEQKERYSQYSMIVEEIPVQPGEAQLYKEDYEDEYDDTYDGNQV 624          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|1209998434|ref|XP_021392991.1| (activating signal cointegrator 1 complex subunit 2 [Lonchura striata domestica])

HSP 1 Score: 124.79 bits (312), Expect = 5.104e-26
Identity = 176/735 (23.95%), Postives = 287/735 (39.05%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSD------------------LEGAVASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARAL-VGGVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIELLRSTTGGYEAPTPRTGLFIKEPRAGRGAEG-------ERRVQRPARSVE--------------------AMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEE------ARDEEFIARQKAYLRQMEKDAEE------DAYLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYN--NLMR-KEEEEEHFWEGMQLKQPELPTIARDSEDDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGESAAQGRGEDGATSHPMSALARRRKEKQKHLRANHNRKVKAVRK 678
            K  A  L  LL +    F   ++++  L+  LD+YL  APR ++   D               V  ++  LHRSV L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G    GLL + ++G I   +    S L++   +V ++F++                  LE  ++  +G+    E +D + YL D    L   +   PL           +  L   Y++ I   E+  + R    N   A  +   +    + + V  ++   + L    E + E +  FI E +Q  T   +E         R +RD          +S LQ   SA  DE R A           +L++    +E    R G  +K+P A  GA         +R     A ++E                    +++ +V+ + P LGEGF+ ACL   GYN   V+N +LE   +P  LD LDR +       P+PL                     D  R + G+  E+        D+  +A Q+    Q     EE       A   ++Y+D++DD Y G Q   +  ++ ++  + R +    ++R K +EE    E    ++ E     R  +   +D     +  ++  Q  L+  G    +  + S V G            A+G G++  T        RR+KE  K  RANHNR+  A RK
Sbjct:   60 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLRSAPRKFDVLWD-----------CHPEVHELQKCLHRSVFLTFLRMSTHKESKDHFITPSVFGKIIYNNFLFDIPKILDLCVLFG-KGNGLLLQKMIGNIFTQQPSYFSDLDETLPTVLQVFNNILHKCGLQCEGASAEPQKLEEKISVTAGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYR-LASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKKMIEVFHILVNQVCLQPILESSCENIQPFIEEFLQIFTSVLQER--------RFLRDYDELFPVEDDVSLLQQASSA-LDETRTA----------YILQAVESAWEGVDRRKGQAVKDPAASNGASAIVESTPEDREDPGAACALEDECAGAAAAPIARVSGVELDSLISQVKDLLPDLGEGFILACLEEYGYNTEQVINNILEEKLVPN-LDKLDRRMERQLKPDPTPLVSSRCNVFQNDEFDVFSRDAVDVSRIQKGKRREKDTTRSLVNDKRLVAEQRQRYSQYSVVLEELPLQPGAAQPFEDYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRPKGQEEGQETEEEDEEEEEEAEKERTKDHFVQDPAVLRERAEARRQAFLARKG----HKHDSSAVIGN-----------AKGHGQNRETQQ-----ERRKKEANKSTRANHNRRAMADRK 741          
BLAST of EWM26745.1 vs. NCBI_GenBank
Match: gi|701366833|ref|XP_009962397.1| (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Tyto alba])

HSP 1 Score: 124.405 bits (311), Expect = 7.109e-26
Identity = 143/586 (24.40%), Postives = 229/586 (39.08%), Query Frame = 0
Query:   43 KMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQ--VPS-FATLASQSHVMDIPRALDLCNLYGFTDAGLLARLLLGAIAFVESGLLSQLEDACRSVSEIFSD------------------LEGAVASGSGD---GETQDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFEAEGETRGCSSNGERACKYAGFACGCARALVG-GVVAGLLALARTREGALEALFTFISELIQT-TDADEEADEGGQGMGRLVRDCAGGL-----LSRLQAFLSAPADEQRPAPDMSGVSYLIE-LLRSTTGGYEAPTPRTGLFIKEPR------------AGRGAEGE-------RRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSL-------PSPL-------------------GADKLRKKGGEEAEEA-------RDEEFIARQKAYLRQMEKDAEE------DAYLL-QEYDDDFDDQYSGEQT 537
            K  A  L  LL +    F   ++++  L+  LD+YL YAPR ++A +D     +D           ++  LHRSV L +LR  T  E +     PS F  +   + + DIP+ LDLC L+G    GLL + ++  I   +    S L++   +V ++F++                  LE  V+   G+    E +D + YL D    L   +   PL           +  L   Y++ I   E+  + R C  N   A  +   +    + +    ++   + L    E + E +  FI E +Q  T   +E         R +RD          +S LQ   S+  DE R A  +  V    E + R      + PTP                      A   +E E          +     +++++ +V+ + P LGEGF+ ACL   GYN   V+N +LE   +PY LD LDR++       P+PL                     D  R + G+   E         D+  +A Q+    Q     EE      +A L  ++Y+D++DD Y G Q 
Sbjct:   60 KFIADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLCYAPRKFDALLDCHPEVND-----------MQKCLHRSVFLTFLRMSTHKESKDHFITPSVFGEIIYSNFLFDIPKILDLCVLFG-KGNGLLLQKMIENIFTQQPSYFSDLDETLPTVLQVFNNILHKCGLQCEGASAEPQKLEEKVSVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYR-LASFYELAIPELESSIKKRCCEDNSVFADLWRRISHSRKKMIEAFHILINQVCLQPILESSCENIQPFIEEFLQIFTSVLQER--------RFLRDYDEQFPVEDDVSLLQQ-ASSTLDETRTAYILQAVESAWEGVDRKKAQVVKDPTPSAASNGASAAAESAAEDMEELGAAYASEDECAGAAAAPIAKVSGVELDSLISQVKDLLPDLGEGFILACLEEYGYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSVDVSRIQKGKRTREKDMTRSLLNDKRLVAEQRERYSQYSVIVEEIPVQPGEAQLYGEDYEDEYDDTYDGNQV 622          
The following BLAST results are available for this feature:
BLAST of EWM26745.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108833|gb|EWM26745.1|0.000e+0100.00activating signal cointegrator 1 complex subunit 2... [more]
gi|700372541|ref|XP_009943762.1|4.972e-2824.14PREDICTED: activating signal cointegrator 1 comple... [more]
gi|663284911|ref|XP_008499729.1|7.749e-2823.97PREDICTED: activating signal cointegrator 1 comple... [more]
gi|663284907|ref|XP_008499727.1|3.757e-2723.66PREDICTED: activating signal cointegrator 1 comple... [more]
gi|695149706|ref|XP_009502470.1|8.637e-2722.77PREDICTED: activating signal cointegrator 1 comple... [more]
gi|729731529|ref|XP_010561633.1|1.956e-2625.30PREDICTED: activating signal cointegrator 1 comple... [more]
gi|729731532|ref|XP_010561634.1|1.956e-2625.30PREDICTED: activating signal cointegrator 1 comple... [more]
gi|723122894|ref|XP_010290138.1|2.257e-2624.83PREDICTED: activating signal cointegrator 1 comple... [more]
gi|1209998434|ref|XP_021392991.1|5.104e-2623.95activating signal cointegrator 1 complex subunit 2... [more]
gi|701366833|ref|XP_009962397.1|7.109e-2624.40PREDICTED: activating signal cointegrator 1 comple... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3983rna3983Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications