EWM26722.1, cds3966 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|585108810|gb|EWM26722.1| (hypothetical protein Naga_100001g144 [Nannochloropsis gaditana]) HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
Query: 1 MRRHATSVVPAAVNNFSSASLPKAKISLSRLCKDLILRMATMLPVSDRKEIMAQWMAQESSIYTDIATVENQLLRMRLEVETAKASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFEG 364
MRRHATSVVPAAVNNFSSASLPKAKISLSRLCKDLILRMATMLPVSDRKEIMAQWMAQESSIYTDIATVENQLLRMRLEVETAKASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFEG
Sbjct: 1 MRRHATSVVPAAVNNFSSASLPKAKISLSRLCKDLILRMATMLPVSDRKEIMAQWMAQESSIYTDIATVENQLLRMRLEVETAKASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFEG 364
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|585110428|gb|EWM28085.1| (hypothetical protein Naga_100120g24 [Nannochloropsis gaditana]) HSP 1 Score: 228.024 bits (580), Expect = 2.847e-68 Identity = 110/253 (43.48%), Postives = 169/253 (66.80%), Query Frame = 0
Query: 114 HPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIARE---KMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFE 363
HPV G+L+ D+ YKK+YC ++ +LA +PIWE+QRI R ERA+ +A + K+++ + LPG +T+Y++ + + LLDGQHRL ALK+L DSG++ + + L+EVF ++ + + + LF EIN+A PV +ID+PD A K II + L +F FK S+N +LPHVNID +RD LF+ ++V R G +A +LL+W++ N+ L+ + D W R +KGR P +EKAV KA+ F+LG++ W+ E
Sbjct: 107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLPGSLTVYEMGE-EIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDM-ADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLRAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMDVE 357
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|1072224731|gb|OEU09480.1| (hypothetical protein FRACYDRAFT_248332 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 197.978 bits (502), Expect = 9.032e-56 Identity = 105/253 (41.50%), Postives = 160/253 (63.24%), Query Frame = 0
Query: 114 HPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNF--CLLEVFTLEK----ESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWL 360
HP+LG+ I+++GYK+++ A++ LA +P+WEKQRI R R + +A +KM+ + + LPGII +++ D ++DGQHR+ LK+L ++ + S D +F L+EV+ K E+ A+ LFLE+N A PVKL+DLP G D K II+ D L FP F S + PH+NIDN+RDALFQ +I+ +HGHK++ + W+ + N+ L K+ + R LV E A+ KA++ FYLGL++ WL
Sbjct: 199 HPILGKCISELGYKRIHLASLKNLATIPVWEKQRIFRLARTKKMATDKMK-TLHLGLPGIIGIFENIDGSLNIVDGQHRVGMLKVL-ETKVTSDDFDFDNILVEVYPALKDEHEETHAKDLFLEVNKAEPVKLVDLPGVGNASD-KKIINEVADRLQDSFPEMFSDSQRCRAPHLNIDNLRDALFQSNIIRKHGHKTSKAVEDWILEQNDLLEVKYQVEENR------ELVKETALKKAEQFRFYLGLESYWL 442
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|1210515730|dbj|GAX25253.1| (hypothetical protein FisN_5Lh335 [Fistulifera solaris]) HSP 1 Score: 193.741 bits (491), Expect = 2.980e-54 Identity = 109/284 (38.38%), Postives = 166/284 (58.45%), Query Frame = 0
Query: 79 EVETAKASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFT---LEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRW 359
EV AK S V +ER+ ++ Q + + E HPVLG A +GYK V+ + LAD+P+WEKQRI R +RA+S+A++KM+ + + +PG+ITLY+ D + ++DGQHR+ + +L + + D + L+EV+ E A+ +FLEIN A PVKL+D+P G A + II+ L+ +FP+ F S ++P++NIDN+RDALF ++++RH SA L WL + N + K+ D + V A+ KAK FYLGLD+ W
Sbjct: 158 EVGKAKTSSV-----MERVADKDATQEETQSE-QEHPVLGMAYASLGYKSVHLVSAKDLADIPVWEKQRIYRHDRAKSMAQDKMK-TMKLGMPGVITLYEDRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDSVLVEVYKELPEYGEDHAKDIFLEINKAEPVKLLDMP-GVATAKDRTIINRGAQLLMERFPSMFSPSQKCRVPNLNIDNLRDALFAANVIKRHSLTSAPALEAWLLEQNAKMEVKYQSDEAK------KTVSVAALTKAKTHSFYLGLDSSW 427
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|551643833|ref|XP_005824709.1| (hypothetical protein GUITHDRAFT_154866 [Guillardia theta CCMP2712] >gi|428168789|gb|EKX37729.1| hypothetical protein GUITHDRAFT_154866 [Guillardia theta CCMP2712]) HSP 1 Score: 185.267 bits (469), Expect = 2.447e-51 Identity = 118/297 (39.73%), Postives = 169/297 (56.90%), Query Frame = 0
Query: 85 ASHVSALQE-VERLRERIT---FQTKIKP---EDSSHPVLGQLIADMGYKKVYCATINQL-ADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADK-QYKLLDGQHRLAALKILADSGIISKDNNF--------CLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFEG 364
AS V+ L+E V L+E++T Q KP E + HP+ G+ +AD GYKKV+ A ++L PI++KQR R ERA SIAR K + S PG I++ + K Q L+DGQHRL A +LA + S++ + L+EV+ + E+ A +F EIN A P KL+DLP K IIDGA + L ++ A FK S + PH+NIDN+RD LFQ ++V R+G K+ +LL W+ N+ L+ +W+ + R +EKA+ KA FYLGL+ WL +G
Sbjct: 86 ASEVTELEEQVTSLKEKVTGADIQALEKPLNTEQADHPIFGRFLADFGYKKVFAADPSKLYTSTPIYKKQRTFRTERASSIARAKAKSSV-TGWPGTISVVEYTGKGQAVLVDGQHRLGAHTLLARQ-MKSQNPDRPLPLGMTEILVEVYPADNENMAAEVFTEINKAEPCKLVDLPQAKVPVQTKKIIDGASEKLRQRYSAMFKPSSACRTPHMNIDNLRDELFQANVVARYGFKTEEDLLNWMLAKNDELAAIPRGEWRPKRRTRAK-TLEKALEKAVAQNFYLGLEWDWLNEDG 379
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|551654516|ref|XP_005830034.1| (hypothetical protein GUITHDRAFT_111100 [Guillardia theta CCMP2712] >gi|428174156|gb|EKX43054.1| hypothetical protein GUITHDRAFT_111100 [Guillardia theta CCMP2712]) HSP 1 Score: 182.956 bits (463), Expect = 4.148e-51 Identity = 111/305 (36.39%), Postives = 171/305 (56.07%), Query Frame = 0
Query: 65 DIATVENQLLRMRLEVETAK-ASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCAT-INQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLAD-----KQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLP--DGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWL 360
+I + E +L + + E + K + + EVER + H + GQL+ D+GYKK+YCA + LA IW+KQR R+ RAESIA KM+ S PG I++ ++ D K+ ++DGQHRLAA +L+ + + ++EV+ ++ LF+EIN A P+ +D+P D GA + I+ GA + L P FK S N ++PH+NID +RD L Q +++ +G KS +LLKWL++ N+ L+ K D WK F+G + KA+ KA+K F+LGL+ +WL
Sbjct: 36 EILSAELKLAKRKYEKSSVKDTTQNQQMNEVERSNTELLKAAGHILGGKEHEIYGQLMVDLGYKKIYCANPVTLLAQAKIWKKQRAFRQHRAESIANSKMKSSVK-GWPGTISIAEIKDPENSEKECFIVDGQHRLAACMLLSSKENAPEGADKVIVEVYPDMQDQNTTDLFVEINKAEPILHVDIPIADVGASATHQAILSGAAERLQKMNPEMFKESQNCRIPHMNIDRLRDELHQAGVIDENGLKSDEDLLKWLEERNKELAQKDDHYWKE-FEGNATKM--KALEKARKHNFFLGLNWQWL 336
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|1210524228|dbj|GAX16957.1| (hypothetical protein FisN_5Hh335 [Fistulifera solaris]) HSP 1 Score: 182.956 bits (463), Expect = 2.941e-50 Identity = 104/284 (36.62%), Postives = 165/284 (58.10%), Query Frame = 0
Query: 79 EVETAKASHVSALQEVERLRERITFQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVF---TLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRW 359
EV AK S V E ++ +T+ K E HP+LG A +GYK V+ + LAD+P+WEKQRI R +RA+++A++K++ + + +PG+ITLY+ D + ++DGQHR+ + +L + + D + L+EV+ E A+ +FLEIN A PVKL+D+P G A + II+ L+ ++P+ F S ++P++NIDN+RDALF ++++RH +A L WL + N + K+ D + V A+AKA+ FYLGLD+ W
Sbjct: 154 EVGIAKTSSV---MEKSAQKDETQEETQSKQE---HPILGMAHASLGYKSVHLVSAKDLADIPVWEKQRIYRHDRAKAMAQDKLK-TMKLGMPGVITLYEDRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDNVLVEVYKELAEYGEDHAKDIFLEINKAEPVKLLDMP-GVATAKDRTIINRGAQLLMERYPSMFSPSQKCRVPNLNIDNLRDALFAANVIKRHSLTTASALEAWLLEQNAIMEAKYQSDEAK------KTVSVSALAKAETHSFYLGLDSSW 423
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|922862534|gb|KOO30123.1| (hypothetical protein Ctob_012497 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 164.851 bits (416), Expect = 3.021e-43 Identity = 95/266 (35.71%), Postives = 139/266 (52.26%), Query Frame = 0
Query: 112 SSHPVLGQLIADMGYKKVYCATINQL-ADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYK---------------LLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRI-FKGRNPLVIEKAVAKAKKGGFYLGLDNRWL 360
SHPV G+LIAD GYK++Y + L A +WE+QR R+ERA IA K + PG I + + + + L+DGQHRL A +LA G + L+EV+ +E + LF EIN A PV L+DLP+GGA I+ A + L ++PA FK S + PH+N+D +R L + ++ RH SA ELL W+ AN +L + D W + ++ + A++KA++ FYLG+ WL
Sbjct: 179 GSHPVFGELIADFGYKRLYRGSPTTLWAGTMLWERQRAFRQERANLIAAAKAKSKA-TGWPGAIAVVERSSSGSEASAPTGHGGGTAIGTLIDGQHRLGAAHLLAQRGKLDGALASILVEVYPPMEEQGVKDLFTEINRAEPVLLVDLPEGGASDQDNAILTAAAEELAQRYPAMFKPSHGCRPPHLNVDVLRAELHRAEVLSRHKLASAAELLDWVDKANRDLGARSDEQWASTGARAKSETALGNALSKARQNAFYLGMGWDWL 443
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|219116066|ref|XP_002178828.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409595|gb|EEC49526.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 166.392 bits (420), Expect = 4.394e-42 Identity = 94/266 (35.34%), Postives = 157/266 (59.02%), Query Frame = 0
Query: 104 QTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNF--CLLEVFTLEK---ESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEK----AVAKAKKGGFYLGLDNRWL 360
+ ++ E + HPVLG IAD G+K+++ + + L+ +P+W+KQRI R +RA+++A +KM+ + + +PGII L++ + + ++DGQHR+ + IL + D + L+EV+ ++ A+ LFLE+N A PVKL+D+P G A+ + II + + ++ FKSS + PH+NIDN+RDALF + ++RH K++ + W+ N++L+ + ++P EK A KAKK FYLGLD WL
Sbjct: 502 EQSVESEINVHPVLGAAIADFGHKRIHVVSAHALSTIPVWKKQRIYRHDRAKAMASDKMK-TLHLGMPGIIGLHEDLNGKLSIIDGQHRVGMMTILHEKCASHDDFDLDRVLVEVYPQNPDHVDTHAQDLFLEVNKAEPVKLVDMP-GVAKGSDRKIISEGAERIAEKYAEMFKSSQKCRPPHLNIDNLRDALFASNAIKRHNLKTSKAVEAWMLAKNQSLADLY----------KDPAEQEKVSKTAYEKAKKFEFYLGLDLSWL 755
BLAST of EWM26722.1 vs. NCBI_GenBank
Match: gi|255082358|ref|XP_002504165.1| (predicted protein [Micromonas commoda] >gi|226519433|gb|ACO65423.1| predicted protein [Micromonas commoda]) HSP 1 Score: 163.696 bits (413), Expect = 4.887e-42 Identity = 95/280 (33.93%), Postives = 152/280 (54.29%), Query Frame = 0
Query: 112 SSHPVLGQLIADMGYKKVYCATINQLA---DVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLA----------------------DKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDW--KRIFKGRNPLVIE----KAVAKAKKGGFYLGLDNRWL 360
+SH + G ++ D GYKK+Y L V I+++QR R ERA+ IA EK +++ LPG++TL + + +LDGQHR+ AL+IL G+I+ D+ L+EVF ++ A +F EIN+A P++ +D+P G A D+K +++GA + ++ A F +S K+P++N+D +R+ LF +V R G + WL+ N L+ + +++W R +GR E KA+AKAK+ GFYLG+D WL
Sbjct: 264 ASHELYGTMLRDFGYKKIYAMPAKNLVCKDKVGIYDQQRAFRAERAQVIAAEKAKEAV-FSLPGVVTLAEGTAAVRGKKTKKKSSLLFGSSSANNTGAHILDGQHRVGALEILLSQGVIAPDHT-VLVEVFENVDDARASEIFTEINAAQPIRFVDMP-GVAPADVKWMLEGAAQRIKERYRAMFSASERCKIPNINLDVLREELFSAEVVTRFGIADEDAFVAWLESENAKLAQRTEKEWLEARPKRGRGSTGSEETYLKALAKAKEHGFYLGMDFSWL 540 The following BLAST results are available for this feature:
BLAST of EWM26722.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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