EWM26727.1, cds3964 (CDS) Nannochloropsis gaditana

Overview
NameEWM26727.1
Unique Namecds3964
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:538987..539043 -
Alignment locationCM002462.1:538877..538939 -
Alignment locationCM002462.1:538356..538781 -
Alignment locationCM002462.1:538168..538296 -

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Properties
Property NameValue
Protein idEWM26727.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g146.8238.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:538987..539043 -
CM002462.1supercontigCM002462.1:538877..538939 -
CM002462.1supercontigCM002462.1:538356..538781 -
CM002462.1supercontigCM002462.1:538168..538296 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26727.1 vs. NCBI_GenBank
Match: gi|585108815|gb|EWM26727.1| (hypothetical protein Naga_100001g146 [Nannochloropsis gaditana])

HSP 1 Score: 455.677 bits (1171), Expect = 3.490e-162
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 
Query:    1 MSGPHISERVVFFMGRVRGATRELPGEGSLLGYAAFCVLEPREIPRYVKEILFPFCRAAIIVPCLYLSRRRKNGISRDTRFLVGQFGREARSGRPTPCCLWMAKTRRGHTVTTSGSLSFLMGLRMARHNLSWFNLNVRTQQLCDRLLVARRVRQQNGDYSRFWPLPLFRVAPPLLFGLLVWRVCSKILANEADGVHTIVFIGTISQLLCCRDICKDILSMFRTR 224
            MSGPHISERVVFFMGRVRGATRELPGEGSLLGYAAFCVLEPREIPRYVKEILFPFCRAAIIVPCLYLSRRRKNGISRDTRFLVGQFGREARSGRPTPCCLWMAKTRRGHTVTTSGSLSFLMGLRMARHNLSWFNLNVRTQQLCDRLLVARRVRQQNGDYSRFWPLPLFRVAPPLLFGLLVWRVCSKILANEADGVHTIVFIGTISQLLCCRDICKDILSMFRTR
Sbjct:    1 MSGPHISERVVFFMGRVRGATRELPGEGSLLGYAAFCVLEPREIPRYVKEILFPFCRAAIIVPCLYLSRRRKNGISRDTRFLVGQFGREARSGRPTPCCLWMAKTRRGHTVTTSGSLSFLMGLRMARHNLSWFNLNVRTQQLCDRLLVARRVRQQNGDYSRFWPLPLFRVAPPLLFGLLVWRVCSKILANEADGVHTIVFIGTISQLLCCRDICKDILSMFRTR 224
The following BLAST results are available for this feature:
BLAST of EWM26727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108815|gb|EWM26727.1|3.490e-162100.00hypothetical protein Naga_100001g146 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3974rna3974Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications