EWM26644.1, cds3946 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26644.1 vs. NCBI_GenBank
Match: gi|585108732|gb|EWM26644.1| (hypothetical protein Naga_100001g165 [Nannochloropsis gaditana]) HSP 1 Score: 233.802 bits (595), Expect = 6.544e-78 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 Query: 1 MSTQVSSCGAKDGESGSPRISSRKEAVPVRSLLQQEVNFQRGDASGLGATTVHERLSHFMFVAFNNRARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD 113 MSTQVSSCGAKDGESGSPRISSRKEAVPVRSLLQQEVNFQRGDASGLGATTVHERLSHFMFVAFNNRARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD Sbjct: 1 MSTQVSSCGAKDGESGSPRISSRKEAVPVRSLLQQEVNFQRGDASGLGATTVHERLSHFMFVAFNNRARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD 113
BLAST of EWM26644.1 vs. NCBI_GenBank
Match: gi|299469780|emb|CBN76634.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.855 bits (159), Expect = 9.824e-12 Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0 Query: 30 RSLLQQEVNFQRGDASGLGATTVHERLSHFMFVAFNNRARSVDVDHVIESIFSTTGD-ARLPQPVPLSQMIDLLVDFWEADGLYD 113 R LL+ E + A G G R RAR++DVD VI+ +FS G LPQ VPL QMIDLLVD WEA+GL+D Sbjct: 26 RGLLRWERERKAWLAGGTGGPVGRRR----------ARARTMDVDEVIDDLFSGRGGTGNLPQSVPLPQMIDLLVDLWEAEGLFD 100
BLAST of EWM26644.1 vs. NCBI_GenBank
Match: gi|219116655|ref|XP_002179122.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409013|gb|EEC48945.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 56.9954 bits (136), Expect = 1.716e-7 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0 Query: 68 ARSVDVDHVIESIFS-------TTGDARLPQPVPLSQMIDLLVDFWEADGL 111 A+ ++VD +I++IF+ TTG R P PVPL QMID+L D WEA+GL Sbjct: 151 AKPLEVDEIIDAIFAAPRQWRETTGPTRFPTPVPLPQMIDILQDLWEAEGL 201 The following BLAST results are available for this feature:
BLAST of EWM26644.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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