EWM26626.1, cds3942 (CDS) Nannochloropsis gaditana

Overview
NameEWM26626.1
Unique Namecds3942
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:493442..493858 -
Alignment locationCM002462.1:493056..493214 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26626.1
Productoxidoreductase
Orig transcript idgnl|cribi|Naga_100001g171.8137.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:493442..493858 -
CM002462.1supercontigCM002462.1:493056..493214 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0018580nitronate monooxygenase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR0041362Npropane_dOase
IPR013785Aldolase_TIM
Homology
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|585108714|gb|EWM26626.1| (oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 392.889 bits (1008), Expect = 2.473e-138
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query:    1 MPDLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQQMNFFRERK 191
            MPDLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQQMNFFRERK
Sbjct:    1 MPDLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQQMNFFRERK 191          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|224010501|ref|XP_002294208.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970225|gb|EED88563.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 190.66 bits (483), Expect = 2.626e-56
Identity = 95/182 (52.20%), Postives = 132/182 (72.53%), Query Frame = 0
Query:    2 PDLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLI-EALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQ 182
            P++P+VAAGGF DGRGL AA+SLGADAVAMG+RFA TKES L + +K  IS  E+TE+DTVY KN DGI ARVLK+  + +   +RP PL V+I  A   A++  +   K++PG   + +K+Y++AQFG AT     AT+ G+ E+G+QF+GQ QGL+ D+PTV+ELV+R+++EA  +  R 
Sbjct:  168 PEVPIVAAGGFADGRGLAAAISLGADAVAMGSRFAITKESALAQRMKEIISGSERTESDTVYGKNFDGIPARVLKSDESLRLN-ARPAPLMVVIYRAFNAARKMNIPLYKVIPGLITQWEKMYIVAQFGAATESLMKATIDGNYEEGVQFIGQSQGLIGDIPTVNELVQRIINEATDVSSRS 348          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|1024689832|gb|KZZ48953.1| (enoyl-ACP reductase [Thalassolituus sp. HI0120])

HSP 1 Score: 183.726 bits (465), Expect = 7.631e-54
Identity = 93/185 (50.27%), Postives = 128/185 (69.19%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQQMNFF 187
            D+P++A GGF DGRGLLAALSLGADA+AMG+RFA T++SPL++  K A+ +  K+E +T+YSKN DGI ARV++TP + +      N +   IEA+K AK       KI+ G     DK+ +LA FG +  +   AT+ GDL+KG+QFVGQ QGL+ D+PTV ++V R+L EA  +H RQQ N +
Sbjct:  162 DIPVIATGGFADGRGLLAALSLGADAIAMGSRFATTQDSPLNQTTKDAVVT--KSEQETIYSKNFDGIPARVMRTPRSIKETRRPMNFILASIEAMKAAKIVKQPIWKIMIGMLAMVDKVKLLAYFGASVPRLRAATIDGDLDKGVQFVGQTQGLIEDIPTVEQVVDRILQEAQDIH-RQQKNLW 343          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|397609505|gb|EJK60397.1| (hypothetical protein THAOC_19260 [Thalassiosira oceanica])

HSP 1 Score: 180.259 bits (456), Expect = 8.357e-54
Identity = 93/179 (51.96%), Postives = 126/179 (70.39%), Query Frame = 0
Query:    2 PDLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPE----KTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLI-EALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEA 175
            PD PL+AAGG G GRGL AA++LGADAVAMG+R A T+ES L E +K  +S+P+     TE+DTVY KN DG+ ARVLK+  + +   +RP P  V+   AL+ A+   +   +I+PG   + DKIY +AQFG AT K   AT+ GD E G+QF+GQ QGL++D+P+V EL++RV+SEA
Sbjct:   35 PDTPLIAAGGIGCGRGLSAAITLGADAVAMGSRLAVTEESSLAETIKKIVSNPDLEGGSTESDTVYGKNFDGLYARVLKSNESVRLN-ARPAPFPVVFYRALQAARTMDIPLWQIIPGLLTQFDKIYTIAQFGAATEKLMKATIDGDFEDGVQFIGQSQGLISDIPSVDELIQRVVSEA 212          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|494077124|ref|WP_007019178.1| (nitronate monooxygenase [Bermanella marisrubri] >gi|94426580|gb|EAT11567.1| hypothetical protein RED65_02814 [Oceanobacter sp. RED65])

HSP 1 Score: 181.8 bits (460), Expect = 5.491e-53
Identity = 94/186 (50.54%), Postives = 130/186 (69.89%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRP-NPLRVLIEALKQAKQFGVNPVK-ILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQQMNF 186
             +P++A GGF DGRGL+AALSLGADA+AMG+RFA +KESPLH+N K A+   E+ EN T+Y  N DG+ ARV+KTP  A+ A+ +P   ++  + ++K AK     PV+ IL G   + DK+ +L+ FG AT K + ATV GDL+KG+QF+GQ QGL+ D P+V E+V RVL++A  +HE  Q   
Sbjct:  162 SIPVIATGGFADGRGLMAALSLGADAIAMGSRFATSKESPLHQNTKDAVV--ERDENQTIYGNNFDGLYARVMKTP-TAKKAMKKPVGFIKAALLSVKAAK-IAKMPVRTILAGLIVQFDKVKLLSLFGAATEKIQAATVDGDLQKGVQFIGQTQGLIEDQPSVQEIVDRVLNQAKTIHEGNQQKL 343          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|518272074|ref|WP_019442282.1| (nitronate monooxygenase [Moritella marina])

HSP 1 Score: 180.259 bits (456), Expect = 1.660e-52
Identity = 93/174 (53.45%), Postives = 126/174 (72.41%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRP-NPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEA 175
            D+P++A GGF DGRGL AAL+LGAD VAMG+RFA ++ES LH +VK  I++  K+ENDT+YSKN DG+ ARVLKTP A+  A  +P N    L +++K AK   +   K++ G F + DKI  L+ FG AT K E AT+ GDL  G+QF+GQ QGL+NDVP+V  +V+R+++EA
Sbjct:  162 DIPVIATGGFADGRGLTAALALGADGVAMGSRFATSQESALHNDVKQVITT--KSENDTIYSKNFDGLYARVLKTP-ASIKATKKPMNFALALFKSVKAAKMVDLPFWKLIAGVFVQFDKIKQLSYFGAATEKLEAATITGDLTTGVQFIGQSQGLINDVPSVAVIVERIMAEA 332          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|492902949|ref|WP_006033355.1| (nitronate monooxygenase [Moritella sp. PE36] >gi|149805866|gb|EDM65854.1| hypothetical protein PE36_22720 [Moritella sp. PE36])

HSP 1 Score: 180.259 bits (456), Expect = 1.881e-52
Identity = 93/174 (53.45%), Postives = 127/174 (72.99%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRP-NPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEA 175
            D+P++A GGF DGRGL+AAL+LGAD VAMG+RFA ++ES LH +VK  I++  K+ENDT+YSKN DG+ ARVLKTP A+  A  +P N    L +++K AK   +   K++ G F + DKI  L+ FG AT K E AT+ G+L  G+QF+GQ QGL+NDVP+V  +V+R++SEA
Sbjct:  162 DIPVIATGGFADGRGLVAALALGADGVAMGSRFATSEESALHNDVKQVITT--KSENDTIYSKNFDGLYARVLKTP-ASIKATKKPMNFALALFKSVKAAKMVDLPFWKLVAGVFVQFDKIKQLSYFGAATEKLEAATIAGNLTTGVQFIGQSQGLINDVPSVAVIVERIMSEA 332          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|1055378334|ref|WP_067041517.1| (nitronate monooxygenase [Moritella sp. JT01])

HSP 1 Score: 179.874 bits (455), Expect = 2.773e-52
Identity = 93/174 (53.45%), Postives = 126/174 (72.41%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRP-NPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEA 175
            D+P++A GGF DGRGL+AALSLGA+ VAMG+RFA ++ES LH +VK  I+   K+ENDT+YSKN DG+ ARVLKTP A+  A  +P N    L +++K AK   +   K++ G F + DKI  L+ FG AT K E AT+ GDL  G+QF+GQ QGL+NDVP+V  +V+R+++EA
Sbjct:  162 DIPVIATGGFADGRGLIAALSLGAEGVAMGSRFATSQESALHNDVKQVITG--KSENDTIYSKNFDGLYARVLKTP-ASIKATKKPMNFALALFKSVKAAKMVDLPFWKLVAGVFVQFDKIKQLSYFGAATEKLEAATINGDLTTGVQFIGQSQGLINDVPSVAIIVERIMTEA 332          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|769993347|ref|WP_045108954.1| (nitronate monooxygenase [Moritella viscosa] >gi|692309670|emb|CED58531.1| putative 2-nitropropane dioxygenase [Moritella viscosa] >gi|1108357861|emb|SGY82600.1| Putative uncharacterized protein [Moritella viscosa] >gi|1108362684|emb|SGY82565.1| Putative uncharacterized protein [Moritella viscosa] >gi|1108367663|emb|SGY82934.1| Putative uncharacterized protein [Moritella viscosa] >gi|1108379693|emb|SGY82298.1| Putative uncharacterized protein [Moritella viscosa] >gi|1108384903|emb|SGY82778.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111432979|emb|SHN96734.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111437933|emb|SHN97280.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111442675|emb|SHO19484.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111447707|emb|SHN96669.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111452507|emb|SHO24180.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111457387|emb|SHN96961.1| Putative uncharacterized protein [Moritella viscosa] >gi|1111462348|emb|SHN96693.1| Putative uncharacterized protein [Moritella viscosa])

HSP 1 Score: 179.489 bits (454), Expect = 3.790e-52
Identity = 92/174 (52.87%), Postives = 127/174 (72.99%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRV-LIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEA 175
            D+P++A GGF DGRGL+AA+SLGA+ VAMG+RFA ++ES LH +VK  I+S  K+ENDT+YSKN DG+ ARVLKTP A+  A  +P    + L +++K AK   +   K++ G F + DKI  L+ FG AT K E AT+ GDL  G+QF+GQ QGL+NDVP+V  +V+R+++EA
Sbjct:  162 DIPVIATGGFADGRGLIAAISLGAEGVAMGSRFATSQESALHNDVKQIITS--KSENDTIYSKNFDGLYARVLKTP-ASIKATKKPMHFALALFKSVKAAKMVDLPFWKLVAGVFVQFDKIKQLSYFGAATEKLEAATINGDLTTGVQFIGQSQGLINDVPSVAIIVERIMTEA 332          
BLAST of EWM26626.1 vs. NCBI_GenBank
Match: gi|1024609024|gb|KZY96110.1| (enoyl-ACP reductase, partial [Oleibacter sp. HI0075])

HSP 1 Score: 177.178 bits (448), Expect = 4.091e-52
Identity = 89/184 (48.37%), Postives = 124/184 (67.39%), Query Frame = 0
Query:    3 DLPLVAAGGFGDGRGLLAALSLGADAVAMGTRFACTKESPLHENVKGAISSPEKTENDTVYSKNIDGISARVLKTPFAAQTAVSRPNPLRVLIEALKQAKQFGVNPVKILPGYFWEPDKIYMLAQFGGATRKFELATVQGDLEKGIQFVGQIQGLVNDVPTVHELVKRVLSEAARLHERQQMNF 186
            D+P++A GGF D RGL+AALSLGA+AVAMG+RFA + +SPLH +VK  +   +K+E +T+YSKN DG+ ARV+KTP + +      N +   +EA K AK       KI+ G     DKI +LA FG +  + + AT+ GDL+KG+QF+GQ QGL+ D+PTV ELV R+L++A  +HE     F
Sbjct:   94 DIPVIATGGFADARGLMAALSLGAEAVAMGSRFATSADSPLHNHVKETVV--KKSEQETIYSKNFDGLWARVMKTPRSIKETKRPMNLIMAGLEATKAAKIVKQPVWKIMLGMLVMLDKIKLLAYFGASVPRLQAATIDGDLDKGVQFIGQTQGLIEDIPTVQELVDRILADAEAMHESNNRFF 275          
The following BLAST results are available for this feature:
BLAST of EWM26626.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108714|gb|EWM26626.1|2.473e-138100.00oxidoreductase [Nannochloropsis gaditana][more]
gi|224010501|ref|XP_002294208.1|2.626e-5652.20predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1024689832|gb|KZZ48953.1|7.631e-5450.27enoyl-ACP reductase [Thalassolituus sp. HI0120][more]
gi|397609505|gb|EJK60397.1|8.357e-5451.96hypothetical protein THAOC_19260 [Thalassiosira oc... [more]
gi|494077124|ref|WP_007019178.1|5.491e-5350.54nitronate monooxygenase [Bermanella marisrubri] >g... [more]
gi|518272074|ref|WP_019442282.1|1.660e-5253.45nitronate monooxygenase [Moritella marina][more]
gi|492902949|ref|WP_006033355.1|1.881e-5253.45nitronate monooxygenase [Moritella sp. PE36] >gi|1... [more]
gi|1055378334|ref|WP_067041517.1|2.773e-5253.45nitronate monooxygenase [Moritella sp. JT01][more]
gi|769993347|ref|WP_045108954.1|3.790e-5252.87nitronate monooxygenase [Moritella viscosa] >gi|69... [more]
gi|1024609024|gb|KZY96110.1|4.091e-5248.37enoyl-ACP reductase, partial [Oleibacter sp. HI007... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3952rna3952Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications