EWM26690.1, cds3924 (CDS) Nannochloropsis gaditana

Overview
NameEWM26690.1
Unique Namecds3924
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:447806..448570 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26690.1
ProductArchease domain protein
Orig transcript idgnl|cribi|Naga_100001g190.8201.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:447806..448570 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002804Archease
IPR023572Archease_dom
Homology
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|585108778|gb|EWM26690.1| (Archease domain protein [Nannochloropsis gaditana])

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query:    1 MEEEWKPLPRRGTKKRRRVRPENGGEGAPCQDTQEGHVKATCLGESGQPPQKPLDTSQMQQVTAAVRRRAAEHRPERGEDMGNDGVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            MEEEWKPLPRRGTKKRRRVRPENGGEGAPCQDTQEGHVKATCLGESGQPPQKPLDTSQMQQVTAAVRRRAAEHRPERGEDMGNDGVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI
Sbjct:    1 MEEEWKPLPRRGTKKRRRVRPENGGEGAPCQDTQEGHVKATCLGESGQPPQKPLDTSQMQQVTAAVRRRAAEHRPERGEDMGNDGVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|167518672|ref|XP_001743676.1| (hypothetical protein, partial [Monosiga brevicollis MX1] >gi|163777638|gb|EDQ91254.1| predicted protein, partial [Monosiga brevicollis MX1])

HSP 1 Score: 156.762 bits (395), Expect = 5.367e-45
Identity = 80/162 (49.38%), Postives = 99/162 (61.11%), Query Frame = 0
Query:   94 LDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSE-AFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            LDHTAD+Q+HAWG+ L  +FE  V  M  YMT+L  +++D SQT  F VEGHDL SLL+A LDEFLFRFS+E   VC+E +I+EF                             + I V+ +GE F L KHPQGTE+KAITYS MQIH      D+YVI+DI
Sbjct:    1 LDHTADIQVHAWGQTLKDSFEQTVVAMFGYMTELDAIEIDDSQTSEFSVEGHDLMSLLYALLDEFLFRFSAEDNLVCREVEIVEF-------------------------DTDNFKITVRGKGEVFDLAKHPQGTEIKAITYSNMQIHTERATHDVYVILDI 137          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|939252617|ref|XP_014245949.1| (PREDICTED: protein archease isoform X1 [Cimex lectularius])

HSP 1 Score: 155.221 bits (391), Expect = 3.435e-44
Identity = 87/165 (52.73%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   91 YEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSE-AFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            YEYLDHTADVQLHAWGKDL  AFE     M  Y+TDL  V+   ++TQT E EG DLSSLLF +LDEFLF FS+E  F+ +   I EF R                          ++ IK    GETFT+ KHPQG +VKAITYS MQIHENE + +L+VIIDI
Sbjct:   14 YEYLDHTADVQLHAWGKDLKEAFEQCAVAMFGYITDLEYVEF--AETQTIEAEGEDLSSLLFHFLDEFLFMFSAEPFFIPRVVMITEFNRE-------------------------EFKIKAVGFGETFTIGKHPQGADVKAITYSNMQIHENEDKVELFVIIDI 151          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|676384705|ref|XP_009035631.1| (hypothetical protein AURANDRAFT_16246, partial [Aureococcus anophagefferens] >gi|323453706|gb|EGB09577.1| hypothetical protein AURANDRAFT_16246, partial [Aureococcus anophagefferens])

HSP 1 Score: 152.91 bits (385), Expect = 2.120e-43
Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = 0
Query:   91 YEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            +E+LDHTADVQ HAWG D+  A  N+  C  +Y+T+L  +DVDP   Q FEV G D+   +F +LDE L+RF+++   C+   +    RP  + +                   G +   V   GE F L KHPQGTEVKAITYSAMQIHEN+ +A+L+VI+DI
Sbjct:    1 WEHLDHTADVQFHAWGADMDAALANLGMCFFDYVTELGAIDVDPDCAQAFEVTGVDMHKFVFRFLDELLYRFAADGVACRSVAVRLTQRPAADGS-------------------GHFVASVTTAGEKFDLAKHPQGTEVKAITYSAMQIHENDDKAELFVIVDI 145          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|1009600171|ref|XP_015928388.1| (protein archease-like [Parasteatoda tepidariorum])

HSP 1 Score: 152.91 bits (385), Expect = 5.528e-43
Identity = 79/165 (47.88%), Postives = 101/165 (61.21%), Query Frame = 0
Query:   91 YEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSE-AFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            YEYLDH ADVQLH+WG  +  AFE I   M  YMT++  VD+  + +Q  E EGHD+ SLLF +LDEFL+ FS+E  F+ ++ KIL F R                           + ++ +  GE F L KHPQGTEVKAITYS MQ+HENEG+ +L+VIIDI
Sbjct:   35 YEYLDHPADVQLHSWGSTIEEAFEQIAVSMFGYMTEIETVDI--TMSQDIEAEGHDMLSLLFHFLDEFLYIFSAEPYFIARKVKILSFDR-------------------------ANFKVRARGYGEIFDLDKHPQGTEVKAITYSNMQVHENEGKTELFVIIDI 172          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|291223652|ref|XP_002731823.1| (PREDICTED: protein archease-like [Saccoglossus kowalevskii])

HSP 1 Score: 150.984 bits (380), Expect = 2.783e-42
Identity = 85/172 (49.42%), Postives = 103/172 (59.88%), Query Frame = 0
Query:   84 DGVAGEFYEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAF-VCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            + + G  YEYLDHTADVQLH+WG  L  + E +V  M  YMTD++ V++  + TQ  E EGHD+ SLL+  LDEFLF FS+E F + KE KI+EF R  EN                       + I  +  GETF L KHPQGTEVKAITYS MQ+HE     D YVIIDI
Sbjct:   21 ENIVGAGYEYLDHTADVQLHSWGSTLEESLEMVVQSMFGYMTDINTVEM--TDTQRIEAEGHDMISLLYQLLDEFLFVFSAEPFFIAKEVKIIEFDR--EN-----------------------FKIVAEGYGETFDLDKHPQGTEVKAITYSNMQVHEEVPTNDCYVIIDI 165          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|551644390|ref|XP_005824986.1| (hypothetical protein GUITHDRAFT_51463, partial [Guillardia theta CCMP2712] >gi|428169069|gb|EKX38006.1| hypothetical protein GUITHDRAFT_51463, partial [Guillardia theta CCMP2712])

HSP 1 Score: 147.902 bits (372), Expect = 2.328e-41
Identity = 80/165 (48.48%), Postives = 97/165 (58.79%), Query Frame = 0
Query:   91 YEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFT-LTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            YEYLDHTADVQ H+WGK    AFE  V CM +Y+TDL  V++  S T    V G DL SLL+A++DEFLF+FS +  V ++ KILEF                          +  + IK +  GE F   TKHPQGTEVKAITYSAMQI     R D+YVI+DI
Sbjct:    2 YEYLDHTADVQFHSWGKTKEEAFEQAVVCMFSYITDLPTVELRASNTVEVRVTGRDLQSLLYAFMDEFLFQFSVDGHVARQVKILEF-------------------------DETNFRIKAEGYGEKFQPRTKHPQGTEVKAITYSAMQIKIENDRTDIYVIVDI 141          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|552830373|ref|XP_005847888.1| (hypothetical protein CHLNCDRAFT_14100, partial [Chlorella variabilis] >gi|307107544|gb|EFN55786.1| hypothetical protein CHLNCDRAFT_14100, partial [Chlorella variabilis])

HSP 1 Score: 145.976 bits (367), Expect = 8.248e-41
Identity = 78/161 (48.45%), Postives = 98/161 (60.87%), Query Frame = 0
Query:   94 LDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAFVCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            LDHTADVQLHAWG  LT AFEN+  CM NYMT L  + +DP+ T+ +E EGHD+ SLLF +LDE LF FS+E FV  + +I  F                        +RQ  + IK +  GE F   +H  GTEVKAITYSAMQI+E    A+++VI+DI
Sbjct:    1 LDHTADVQLHAWGATLTEAFENVALCMFNYMTPLKGIAIDPALTRRYEAEGHDMQSLLFNFLDELLFSFSTEFFVPSQLRITSF------------------------DRQ-TWQIKAEGHGEKFDRQRHVCGTEVKAITYSAMQINETPEDAEVFVIVDI 136          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|514699457|ref|XP_004997297.1| (archease [Salpingoeca rosetta] >gi|326435166|gb|EGD80736.1| archease [Salpingoeca rosetta])

HSP 1 Score: 146.362 bits (368), Expect = 2.076e-40
Identity = 85/165 (51.52%), Postives = 106/165 (64.24%), Query Frame = 0
Query:   91 YEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAF-VCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHENEGRADLYVIIDI 254
            YEYLDHTAD+Q+HAWG  L  +FE  V  M  YMT+L KVD+D  +T   EV G DL SLLFA LDEFLFRFS+E F VCK  +I+EF       +T++                  + I+V+  GE F L KHPQGTE+KAITYS MQIH+++   D+YVI+DI
Sbjct:   28 YEYLDHTADIQVHAWGDSLKESFEQCVVAMFGYMTELDKVDIDTEKTSELEVSGTDLLSLLFALLDEFLFRFSAEDFLVCKRVEIVEF-------DTTN------------------WKIRVRGYGEPFDLAKHPQGTEIKAITYSNMQIHDDQPTHDVYVILDI 167          
BLAST of EWM26690.1 vs. NCBI_GenBank
Match: gi|817082414|ref|XP_012263767.1| (protein archease-like [Athalia rosae])

HSP 1 Score: 145.591 bits (366), Expect = 2.733e-40
Identity = 86/167 (51.50%), Postives = 102/167 (61.08%), Query Frame = 0
Query:   91 YEYLDHTADVQLHAWGKDLTHAFENIVPCMLNYMTDLSKVDVDPSQTQTFEVEGHDLSSLLFAWLDEFLFRFSSEAF-VCKEAKILEFVRPLENANTSSKSTGGAVGKLNEGERQGKYTIKVQAEGETFTLTKHPQGTEVKAITYSAMQIHE--NEGRADLYVIIDI 254
            YEYLDHTADVQLHAWG+ L  AFE     M  YMTDL KV++   +    E EGHDL SLLF +LDE LF FS+E F V ++ KI EF   +EN                       + IK  A GE FTL KHPQGTEVKAITYSAMQI++  +  R +++VIIDI
Sbjct:   16 YEYLDHTADVQLHAWGETLEEAFEQCAMAMFGYMTDLDKVEM--KEIHHLEAEGHDLQSLLFHFLDELLFMFSAEHFLVARKVKITEF--DVEN-----------------------FKIKAMALGEEFTLGKHPQGTEVKAITYSAMQIYDRPDNERPEVFVIIDI 155          
The following BLAST results are available for this feature:
BLAST of EWM26690.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108778|gb|EWM26690.1|0.000e+0100.00Archease domain protein [Nannochloropsis gaditana][more]
gi|167518672|ref|XP_001743676.1|5.367e-4549.38hypothetical protein, partial [Monosiga brevicolli... [more]
gi|939252617|ref|XP_014245949.1|3.435e-4452.73PREDICTED: protein archease isoform X1 [Cimex lect... [more]
gi|676384705|ref|XP_009035631.1|2.120e-4344.51hypothetical protein AURANDRAFT_16246, partial [Au... [more]
gi|1009600171|ref|XP_015928388.1|5.528e-4347.88protein archease-like [Parasteatoda tepidariorum][more]
gi|291223652|ref|XP_002731823.1|2.783e-4249.42PREDICTED: protein archease-like [Saccoglossus kow... [more]
gi|551644390|ref|XP_005824986.1|2.328e-4148.48hypothetical protein GUITHDRAFT_51463, partial [Gu... [more]
gi|552830373|ref|XP_005847888.1|8.248e-4148.45hypothetical protein CHLNCDRAFT_14100, partial [Ch... [more]
gi|514699457|ref|XP_004997297.1|2.076e-4051.52archease [Salpingoeca rosetta] >gi|326435166|gb|EG... [more]
gi|817082414|ref|XP_012263767.1|2.733e-4051.50protein archease-like [Athalia rosae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3933rna3933Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications