EWM26613.1, cds3920 (CDS) Nannochloropsis gaditana

Overview
NameEWM26613.1
Unique Namecds3920
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:444623..445858 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26613.1
Product5-enolpyruvylshikimate-3-phosphate synthase
Orig transcript idgnl|cribi|Naga_100001g192.8124.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:444623..445858 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
GO:00038663-phosphoshikimate 1-carboxyvinyltransferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
Vocabulary: INTERPRO
TermDefinition
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b
IPR023193EPSP_synthase_CS
IPR006264EPSP_synthase
IPR001986Enolpyruvate_Tfrase_dom
Homology
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|585108700|gb|EWM26612.1| (5-enolpyruvylshikimate-3-phosphate synthase [Nannochloropsis gaditana] >gi|585108701|gb|EWM26613.1| 5-enolpyruvylshikimate-3-phosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
Query:    1 MTFKAGTASSKQRKIKRHSVLILGLSLATLSTSQAFLSPARSYSLPRASALGFRAPLAPATESLHFVTPLNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            MTFKAGTASSKQRKIKRHSVLILGLSLATLSTSQAFLSPARSYSLPRASALGFRAPLAPATESLHFVTPLNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR
Sbjct:    1 MTFKAGTASSKQRKIKRHSVLILGLSLATLSTSQAFLSPARSYSLPRASALGFRAPLAPATESLHFVTPLNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|299470684|emb|CBN78624.1| (3-Phosphoshikimate 1-Carboxyvinyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 468.003 bits (1203), Expect = 1.944e-159
Identity = 231/343 (67.35%), Postives = 272/343 (79.30%), Query Frame = 0
Query:   70 LNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWT-VQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            + A  A  +E L V PIS   GE+ELPGSKS+SNR+LLLSAL++GTT V+NLL SEDI+YM+ AL  L + ++   E +   V G    F+   P EL+LGNAGTAMRPLTA +CAG G+F +DGTPRMRERPI DLVDGL+QLGVD++CS TGCPPV I+A GL+GG  R+SGKISSQYLSALLMAAPL+ G+V IEITDELVSAPYVHMT+KLM +FGV+V NEGD  FT++ GQ Y SPG I  EGDASSASYFL GAAITGG VTVRGCG +SVQGDV FA VL +MGAT+ W   ++ V+R    PL+G+DVDCG IPDAAMTLAV+ALFAEGPTAIR
Sbjct:   76 MGATAATRLESLTVSPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQYMLGALKTLKVSVDSDLEAKTVEVVGNAGPFEVSDPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQLGVDVSCSDTGCPPVNIKAAGLNGGTTRVSGKISSQYLSALLMAAPLSSGEVVIEITDELVSAPYVHMTIKLMDKFGVKVKNEGDMRFTIKDGQKYVSPGTIAVEGDASSASYFLGGAAITGGPVTVRGCGRDSVQGDVRFAEVLEKMGATLTWEANAMTVSRDLETPLRGVDVDCGEIPDAAMTLAVIALFAEGPTAIR 418          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|1210521120|dbj|GAX19868.1| (3-phosphoshikimate 1-carboxyvinyltransferase [Fistulifera solaris])

HSP 1 Score: 439.884 bits (1130), Expect = 9.034e-149
Identity = 227/357 (63.59%), Postives = 263/357 (73.67%), Query Frame = 0
Query:   63 SLHFVTPLNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDS---DKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLAC-SPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGD----GVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            S  FV PL+A     +E L V PI + +G + LPGSKS+SNR LLL+ALS+GTT VDNLL S+DI YM+QAL  L + +EK   +  TV G+    +S   D+  EL+LGNAGTAMRPL AALC G G F LDG PRMRERPI+DL+DGLQQLG D+ C   TGCPPVTIRA+GL  G   ISGK+SSQ+LS+LLMAAP   GDV I I DEL+SAPYV +T+ LM +FGV V  +GD      FT+   + Y SPG I  EGDASSASYF+AGAAITGG VTVRGCGS+SVQGDV FA V+ +MGATV W P SI VTR P V LKG+DVDCG IPDAAMTLAV ALFAEGPT IR
Sbjct:   32 SASFV-PLSATKTDVVETLTVAPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVDNLLDSDDIRYMLQALDTLQVPVEKHSADSVTVTGQAGPINSPTPDQTCELFLGNAGTAMRPLAAALCMGQGQFILDGVPRMRERPIADLIDGLQQLGADVECVKETGCPPVTIRAKGLQAGKASISGKMSSQFLSSLLMAAPAVDGDVTISIKDELISAPYVALTIGLMKKFGVNVQIDGDIEETPSFTIASTEKYVSPGSILVEGDASSASYFIAGAAITGGTVTVRGCGSDSVQGDVAFANVMEQMGATVTWAPESITVTRDPSVRLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIR 387          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|1210525945|dbj|GAX15231.1| (3-phosphoshikimate 1-carboxyvinyltransferase [Fistulifera solaris])

HSP 1 Score: 439.499 bits (1129), Expect = 1.186e-148
Identity = 228/357 (63.87%), Postives = 262/357 (73.39%), Query Frame = 0
Query:   63 SLHFVTPLNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDS---DKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLAC-SPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEV----DNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            S  FV PL+A      E L V PI + +G + LPGSKS+SNR LLL+ALS+GTT VDNLL S+DI YM+QAL  L + +EK   +  TV G+    +S   D+  EL+LGNAGTAMRPL AALC G G F LDG PRMRERPI+DL+DGLQQLG D+ C   TGCPPVTIRA+GL GG   ISGK+SSQ+LS+LLMAAP   GDV I I DEL+SAPYV +T+ LM +FGV V    D EG   FT+   + Y SPG I  EGDASSASYF+AGAAITGG VTVRGCGS+SVQGDV FA V+ +MGATV W P SI VTR   V LKG+DVDCG IPDAAMTLAV ALFAEGPT IR
Sbjct:   32 SASFV-PLSATKTGVAETLTVAPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVDNLLDSDDIRYMLQALDTLQVPVEKHSSDSVTVTGQAGPINSPTPDQTCELFLGNAGTAMRPLAAALCMGQGQFVLDGVPRMRERPIADLIDGLQQLGADVECVKETGCPPVTIRAKGLQGGKASISGKMSSQFLSSLLMAAPAVDGDVTISIKDELISAPYVALTIGLMKKFGVNVQIDGDMEGTPSFTIASTEKYVSPGSILVEGDASSASYFIAGAAITGGTVTVRGCGSDSVQGDVAFANVMEQMGATVTWAPESITVTRDASVRLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIR 387          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|546301885|ref|XP_005711541.1| (3-phosphoshikimate 1-carboxyvinyltransferase [Chondrus crispus] >gi|507107825|emb|CDF41247.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Chondrus crispus])

HSP 1 Score: 433.721 bits (1114), Expect = 1.757e-146
Identity = 233/385 (60.52%), Postives = 277/385 (71.95%), Query Frame = 0
Query:   35 AFLSPARSYSLPR-ASALGFRA-PLAPATESLH-FVTPLNAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCA--GHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRAR--GLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVD-NEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            AFL+P    + PR  +AL  RA    P     H    PL    +  +E L + PI++  G I+LPGSKS+SNR+LLL+AL++G T + NLL S+DI YM +AL  L +  E T +  + V G   A+   +  EL+LGNAGTAMRPLTAALC   G G+F LDGTPRMRERPI+DL+D LQQLG D+ CS TGCPPV IR    GL GG+ R+SGKISSQYLSALL+AAP+A  DV I ITDELVS PYV MT+ LM +FGV+V  +EG+  F V+ GQ Y SPG+ F EGDASSASYFLAGAAITGG VTVRGCGSESVQGDV FA ++G MGA VEW   SI V+R+PG  LKG+DVDC  IPDAAM+LA  ALFAEGPTAIR
Sbjct:    2 AFLAPLPVQASPRRHTALLSRARSFPPRVARRHAHARPLRMTASTPVESLPLSPIASLRGVIDLPGSKSLSNRVLLLAALARGRTTIRNLLVSDDIRYMQEALKALSVSYETTADGAFVVDGCAGAWPV-QTAELFLGNAGTAMRPLTAALCVAKGKGEFVLDGTPRMRERPINDLIDALQQLGADVECSDTGCPPVRIRNTEAGLPGGVARVSGKISSQYLSALLIAAPMANEDVTIRITDELVSVPYVKMTINLMNKFGVDVQVDEGNTEFVVKKGQQYVSPGEYFVEGDASSASYFLAGAAITGGPVTVRGCGSESVQGDVDFARIMGLMGAKVEWEANSITVSREPGTKLKGVDVDCVDIPDAAMSLATTALFAEGPTAIR 385          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|219112561|ref|XP_002178032.1| (3-phosphoshikimate 1-carboxyvinyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410917|gb|EEC50846.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 427.172 bits (1097), Expect = 8.624e-144
Identity = 214/337 (63.50%), Postives = 252/337 (74.78%), Query Frame = 0
Query:   83 VQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDSDKP---LELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLAC-SPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGD----GVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            V+PI + +G + LPGSKS+SNR LLL+ALS+G T V+NLL S+DI YM+QAL  L + +E+  ++  TV G+    +S  P    EL+LGNAGTAMRPL AALC G G F LDG  RMRERPI+DLVDGL+QLG D++C   +GCPPVTI A GL GG   ISGK+SSQ+LS+LLMAAPL  GD+ I I DEL+SAPYV +T+ LM +FGV VD EGD      F +   + Y SP  I  EGDASSASYF+AGAAITGG VTVRGCGSESVQGDV FA V+ +MGAT+ W P SI VTR P V LKG+DVDCG IPDAAMTLAV ALFAEGPT IR
Sbjct:   50 VKPIKSLDGTVTLPGSKSLSNRCLLLAALSEGKTRVNNLLDSDDICYMLQALEQLAVPVERHSDDSVTVTGKAGPINSPTPEKVCELFLGNAGTAMRPLAAALCMGKGKFLLDGVSRMRERPIADLVDGLKQLGADVSCVEESGCPPVTINANGLQGGCASISGKMSSQFLSSLLMAAPLVDGDINISIKDELISAPYVALTIGLMKKFGVNVDIEGDMDGAPSFKIASSEKYISPKSILVEGDASSASYFVAGAAITGGTVTVRGCGSESVQGDVAFANVMEQMGATITWAPESITVTRDPSVKLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIR 386          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|223997738|ref|XP_002288542.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975650|gb|EED93978.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 426.402 bits (1095), Expect = 1.953e-143
Identity = 221/366 (60.38%), Postives = 261/366 (71.31%), Query Frame = 0
Query:   59 PATESLHFVTPLNAAGAQ---EMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTG--ENQWTVQGRGAAFDSDKP---LELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLAC-SPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGD----GVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            P++   H  + L+A       E  QL V PI+T EG + LPGSKS+SNR LLL+ALS G T V+NLL+S+DI YM++AL  L + +E+    +   TV G+    +S  P   +EL+LGNAGTAMRPL AALC G G F LDG PRMRERPISDL+DGL+QLG D++C   TGCPPVTI A GL GG   ISGK+SSQ+LS+LLMA+P   GDV I I DEL+SAPYV +T+ LM +FGV V  EGD      F +   + Y SP  I  EGDASSASYFLAGAAITGG VTVRGCGS+SVQGDV FA V+ +MGATV W P SI +TR P   LKG+DVDCG IPDAAMTLAV ALFAEGPT IR
Sbjct:   25 PSSTQCHATSSLSAMTFDVDAEKNQLTVTPIATLEGTVTLPGSKSLSNRCLLLAALSSGNTRVENLLESDDIRYMLEALDTLKVPVERDAIDKTSVTVTGQAGPINSPTPEEVVELFLGNAGTAMRPLAAALCMGEGKFVLDGVPRMRERPISDLIDGLKQLGADVSCVEETGCPPVTINASGLKGGKASISGKMSSQFLSSLLMASPAVDGDVTISIKDELISAPYVSLTIGLMKKFGVNVKIEGDMDGTPSFIIGADEKYTSPESILVEGDASSASYFLAGAAITGGTVTVRGCGSDSVQGDVAFANVMEQMGATVTWAPESITITRDPNTKLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIR 390          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|397639938|gb|EJK73845.1| (hypothetical protein THAOC_04512 [Thalassiosira oceanica])

HSP 1 Score: 427.172 bits (1097), Expect = 3.763e-143
Identity = 217/346 (62.72%), Postives = 263/346 (76.01%), Query Frame = 0
Query:   76 QEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTV--QGRGAAFDSDKP---LELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLAC-SPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEG--DGV--FTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            +E  QL V PI + +G + LPGSKS+SNR LLL+ALS+GTT V+NLL+S+DI YM++AL  L + +E+  +++ +V   G+    DS  P   +EL+LGNAGTAMRPL AALC G G F LDG PRMRERPI+DL+DGL+QLG ++ C   TGCPPVTI A GL+GG   ISGK+SSQ+LS+LLMA+P+  GDV I+I DEL+SAPYV +T+ LM +FGV V+ EG  DG   F ++G + Y SP  I  EGDASSASYFLAGAAITGG VTVRGCGSESVQGDV FA V+ +MGATV W P SI VTR P   L+G+DVDCG IPDAAMTLAV ALFAEGPT IR
Sbjct:   80 EEKNQLTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVENLLESDDIRYMLEALDTLKVPVERDEDDKTSVAVTGQSGPIDSPTPEETVELFLGNAGTAMRPLAAALCMGSGKFVLDGVPRMRERPIADLIDGLRQLGAEVTCVEETGCPPVTIDAEGLAGGTAEISGKMSSQFLSSLLMASPVVDGDVTIKIKDELISAPYVSLTIGLMKKFGVNVEIEGEMDGTPSFVIKGSEKYVSPESILVEGDASSASYFLAGAAITGGTVTVRGCGSESVQGDVAFADVMEQMGATVTWAPESITVTRDPDTRLRGVDVDCGKIPDAAMTLAVAALFAEGPTTIR 425          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|1072230402|gb|OEU15135.1| (3-phosphoshikimate 1-carboxyvinyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 421.394 bits (1082), Expect = 5.563e-142
Identity = 216/349 (61.89%), Postives = 256/349 (73.35%), Query Frame = 0
Query:   71 NAAGAQEMEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLEKTGENQWTVQGRGAAFDS---DKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLAC-SPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEG----DGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            +A  A  +E L V PI + +G + LPGSKS+SNR LLL+ALS G T VDNLL+S+DI YM+ AL  L + +E+      TV G+    +S   ++ ++L+LGNAGTAMRPL AALC G G F LDG PRMRERPI+DL+DGLQQLG D+ C   TGCPPVTI A GL GG   ISGK+SSQ+LS+LLMA+P+  GDV I+I DEL+SAPYV +T+ LM +FGV V  EG       F +   + Y+SP  I  EGDASSASYF+AGAAITGG VTVRGCGSESVQGDV FA V+ +MGATV W P SI VTR P V LKG+DVDCG IPDAAMTLAV ALFAEGPT IR
Sbjct:    3 SADAAATVETLTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSDGDTRVDNLLESDDIRYMLDALDTLKVPVERHSGESVTVTGQSGPINSPNKNEIIDLFLGNAGTAMRPLAAALCMGQGKFVLDGVPRMRERPIADLIDGLQQLGADVTCVEETGCPPVTINAEGLKGGEASISGKMSSQFLSSLLMASPVVDGDVVIKIKDELISAPYVALTIGLMKKFGVNVRIEGSMDEQPSFHIAKSEQYKSPDSILVEGDASSASYFIAGAAITGGTVTVRGCGSESVQGDVAFADVMEKMGATVTWGPESITVTRDPSVQLKGVDVDCGKIPDAAMTLAVAALFAEGPTTIR 351          
BLAST of EWM26613.1 vs. NCBI_GenBank
Match: gi|545713081|ref|XP_005708844.1| (3-phosphoshikimate 1-carboxyvinyltransferase [Galdieria sulphuraria] >gi|452825327|gb|EME32324.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Galdieria sulphuraria])

HSP 1 Score: 416.772 bits (1070), Expect = 1.231e-139
Identity = 211/335 (62.99%), Postives = 257/335 (76.72%), Query Frame = 0
Query:   78 MEQLVVQPISTFEGEIELPGSKSISNRILLLSALSQGTTVVDNLLQSEDIEYMIQALLDLGIKLE-KTGENQWTVQGRGAAFDSDKPLELYLGNAGTAMRPLTAALCAGHGDFTLDGTPRMRERPISDLVDGLQQLGVDLACSPTGCPPVTIRARGLSGGIVRISGKISSQYLSALLMAAPLARGDVRIEITDELVSAPYVHMTVKLMARFGVEVDNEGDGVFTVRGGQTYRSPGQIFTEGDASSASYFLAGAAITGGRVTVRGCGSESVQGDVYFATVLGEMGATVEWTPTSIQVTRQPGVPLKGIDVDCGAIPDAAMTLAVVALFAEGPTAIR 411
            +E + V  I+   G + LPGSKS+SNR+LLLSAL++GTT+V+NLL+SED+ YM++AL  LG+K+E ++ E +  ++G G  F +    EL+LGNAGTAMRPLTAALC G G+F LDG  RMRERPI+DLV GLQQLG  + CS TGCPPV I+A+GL GG   +SGK+SSQ+LS+LLMAAP ++ DV IEI DEL+S PYV MT++LM RFGV V NE   VF + G Q Y SPG  F EGDASSASYFLAG AITGG +TV GCGS+S+QGD+ F  VL +MGATV WTP SI V+R  G  L+GID DC  IPDAAMTLAVVALFAEG TA+R
Sbjct:   64 IETVTVPEINNLTGTLVLPGSKSLSNRVLLLSALAKGTTLVENLLESEDVSYMLEALKLLGVKVEYESKEKKARIEGCGGPFPASTG-ELFLGNAGTAMRPLTAALCLGDGEFVLDGVKRMRERPIADLVQGLQQLGAQVTCSDTGCPPVHIKAKGLRGGKTIVSGKMSSQFLSSLLMAAPYSKNDVVIEIQDELISVPYVSMTIELMRRFGVTVGNEDYRVFRIAGNQCYSSPGSYFVEGDASSASYFLAGGAITGGPITVEGCGSDSIQGDIRFVHVLEKMGATVSWTPHSITVSRGKGKVLEGIDEDCIDIPDAAMTLAVVALFAEGHTALR 397          
The following BLAST results are available for this feature:
BLAST of EWM26613.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108700|gb|EWM26612.1|0.000e+0100.005-enolpyruvylshikimate-3-phosphate synthase [Nanno... [more]
gi|299470684|emb|CBN78624.1|1.944e-15967.353-Phosphoshikimate 1-Carboxyvinyltransferase [Ecto... [more]
gi|1210521120|dbj|GAX19868.1|9.034e-14963.593-phosphoshikimate 1-carboxyvinyltransferase [Fist... [more]
gi|1210525945|dbj|GAX15231.1|1.186e-14863.873-phosphoshikimate 1-carboxyvinyltransferase [Fist... [more]
gi|546301885|ref|XP_005711541.1|1.757e-14660.523-phosphoshikimate 1-carboxyvinyltransferase [Chon... [more]
gi|219112561|ref|XP_002178032.1|8.624e-14463.503-phosphoshikimate 1-carboxyvinyltransferase [Phae... [more]
gi|223997738|ref|XP_002288542.1|1.953e-14360.38predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397639938|gb|EJK73845.1|3.763e-14362.72hypothetical protein THAOC_04512 [Thalassiosira oc... [more]
gi|1072230402|gb|OEU15135.1|5.563e-14261.893-phosphoshikimate 1-carboxyvinyltransferase [Frag... [more]
gi|545713081|ref|XP_005708844.1|1.231e-13962.993-phosphoshikimate 1-carboxyvinyltransferase [Gald... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3929rna3929Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications