EWM26677.1, cds3919 (CDS) Nannochloropsis gaditana

Overview
NameEWM26677.1
Unique Namecds3919
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:440401..440446 +
Alignment locationCM002462.1:440520..441076 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26677.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g196.8188.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:440401..440446 +
CM002462.1supercontigCM002462.1:440520..441076 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|585108765|gb|EWM26677.1| (hypothetical protein Naga_100001g196 [Nannochloropsis gaditana])

HSP 1 Score: 407.912 bits (1047), Expect = 5.688e-144
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDKESEDAMEETNMAE 200
            MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDKESEDAMEETNMAE
Sbjct:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDKESEDAMEETNMAE 200          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|553178015|ref|XP_005852515.1| (putative ankyrin repeat protein [Nannochloropsis gaditana CCMP526] >gi|422296019|gb|EKU23318.1| putative ankyrin repeat protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 406.371 bits (1043), Expect = 1.840e-143
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDKESEDAMEETNMAE 200
            MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVD+RDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDKESEDAMEETNMAE
Sbjct:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDMRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDKESEDAMEETNMAE 200          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|1032649427|gb|OAQ30714.1| (ankyrin [Mortierella elongata AG-77])

HSP 1 Score: 129.798 bits (325), Expect = 3.281e-34
Identity = 63/124 (50.81%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    6 LDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLP 129
            +  NIW+ ASDGDL+ VK F+++ G+ +N+ DEFGY+ LHAA+SYGH ELI +L+  G DV+++DP+GD+PL VCE V  AE LV  GAD +  N       + A EE  + VA YLR L G+P
Sbjct:    1 MSHNIWLAASDGDLAAVKAFINEKGVSINAQDEFGYSALHAAASYGHKELITYLLENGADVNIQDPEGDSPLFVCETVDIAEMLVKAGADAKHINENEMTAAENAEEEEWLEVAHYLRELTGVP 124          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|929764493|ref|XP_014157227.1| (hypothetical protein SARC_04421 [Sphaeroforma arctica JP610] >gi|906954294|gb|KNC83325.1| hypothetical protein SARC_04421 [Sphaeroforma arctica JP610])

HSP 1 Score: 124.79 bits (312), Expect = 2.129e-32
Identity = 59/135 (43.70%), Postives = 89/135 (65.93%), Query Frame = 0
Query:    7 DRNIWICASDGDLSGVKEFLDDGGLDV--NSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRA 139
            D N+W+ ASD ++  VKE ++D   D+  NS D  GYT +HAA+ +GH EL+++L+ +GGD +V D DGD+PLH  EDV  A+ LV  GAD   +N++G  P+DVA EEG + +  + R   G+ P++ E ++ A
Sbjct:   41 DSNLWVAASDNNIGRVKELIEDASSDLSPNSKDGNGYTPMHAAAGWGHKELLEYLISKGGDANVTDNDGDSPLHSTEDVIIAQILVDAGADLAIKNDEGLTPNDVASEEGLLEMCNFFREKLGMDPMTAESIRIA 175          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|1018855543|dbj|GAT60799.1| (ankyrin [Mycena chlorophos])

HSP 1 Score: 124.405 bits (311), Expect = 4.451e-32
Identity = 74/186 (39.78%), Postives = 108/186 (58.06%), Query Frame = 0
Query:    4 ATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLC--GLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKEADDK 187
            A+   N+W+ A DGDL  V+  ++   ++ N+ DEF YT +HAA+SYGH++L+++L+ +GGDV+V D DGDTPL+  E++  A  LV HGA    RN++G  P +  L E   AVA YL+ +    LPPL T         V Q S   +   +V +E  TA L    A I     EEEG++ D++
Sbjct:    2 ASKTSNVWVAAGDGDLERVRHLVEVESVNPNAPDEFTYTPMHAAASYGHLDLLEYLISKGGDVNVVDSDGDTPLYTVENIETARFLVQHGAAIDRRNSEGISPIE-HLREEFGAVANYLQSVASPSLPPLPT---------VPQPS---QREQEVVSEELTAALMASVAEIMQKA-EEEGRDPDEE 173          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|1178056394|gb|ORE11755.1| (ankyrin [Rhizopus microsporus var. microsporus])

HSP 1 Score: 122.094 bits (305), Expect = 2.195e-31
Identity = 67/151 (44.37%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCG--LPPLSTEQMQRAMVAVDQASND 149
            M A T   N+W+ A DG L  VKE ++ GG+DVNS D+FGYT +HAA SY   E++++L+ +G DV+V D D DTPL V E V  A+ L+  GADP+  N  G  P   A +EG   VA YL  +    LP    E M  A V  D    D
Sbjct:    1 MRAPTSQDNLWVAAGDGQLDRVKELIE-GGMDVNSHDQFGYTAMHAAVSYNQTEIVKYLLDKGADVNVEDFDKDTPLFVAETVEMAQILLDRGADPKKVNEDGFTPALTAFQEGWKEVAEYLANITKEVLPTEDLEDMSLAHVQHDNNDED 150          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|301119971|ref|XP_002907713.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106225|gb|EEY64277.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 120.168 bits (300), Expect = 3.503e-31
Identity = 62/115 (53.91%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    4 ATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAV 118
            A L  N+W  ASDGD+  VK FL  GG DVN+ DE GYT L AA SY H+EL+ FL+  G DV + D D DTPLH CE V  A+ L+ HGA   ARN++G+ P+DVA+E+ H A+
Sbjct:    2 AHLPPNVWTVASDGDVESVKAFLASGG-DVNAMDENGYTPLQAAVSYNHMELVVFLLASGADVKLGDNDMDTPLHRCETVECAKLLLEHGAGLNARNSEGQTPYDVAIEDEHEAL 115          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|568036450|gb|ETM34060.1| (hypothetical protein L914_18769 [Phytophthora parasitica])

HSP 1 Score: 119.783 bits (299), Expect = 3.578e-31
Identity = 59/117 (50.43%), Postives = 77/117 (65.81%), Query Frame = 0
Query:    9 NIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPL 125
            N+W  +SDGD+  VK FL  GG D N+ DE GYT L AA SY H+EL+ FL+  G DV + D D DTPLH CE V  A+ L+ HGAD  ARN++G+ P+DVA+E+ H  +    + L
Sbjct:    4 NVWTASSDGDIESVKAFLASGG-DANAKDENGYTPLQAAVSYNHMELVVFLLASGADVKLGDNDMDTPLHRCETVECAKLLLEHGADLNARNSEGQTPYDVAIEDEHAELKTLYKNL 119          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|576981834|gb|EUC54577.1| (ankyrin [Rhizoctonia solani AG-3 Rhs1AP])

HSP 1 Score: 120.939 bits (302), Expect = 5.310e-31
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADE-FGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQR 138
            M  A  ++NIWI A DGDL  VK  +++ G+  N+AD+  GYT +HAASSYGH++++ +L+ +GGDV+V D +GDTPL   E VA A+ LV +GA    RN++G  P + A+EE    VA YL+   GLP  +    +R
Sbjct:    3 MALADANKNIWIAAGDGDLERVKILVEEQGVSPNAADDVIGYTPMHAASSYGHIQILTYLISKGGDVNVTDEEGDTPLFTAETVAVAQFLVENGALVDVRNSEGISPIE-AVEEDFPDVAEYLQSRSGLPTSTQSSQER 140          
BLAST of EWM26677.1 vs. NCBI_GenBank
Match: gi|727150362|emb|CEG67309.1| (hypothetical protein RMATCC62417_03757 [Rhizopus microsporus] >gi|729698046|emb|CEJ04623.1| hypothetical protein RMCBS344292_18578 [Rhizopus microsporus])

HSP 1 Score: 120.939 bits (302), Expect = 6.111e-31
Identity = 72/183 (39.34%), Postives = 99/183 (54.10%), Query Frame = 0
Query:    1 MVAATLDRNIWICASDGDLSGVKEFLDDGGLDVNSADEFGYTCLHAASSYGHVELIQFLVGRGGDVDVRDPDGDTPLHVCEDVAAAEALVTHGADPQARNNQGKRPHDVALEEGHVAVAGYLRPLCGLPPLSTEQMQRAMVAVDQASNDVENGGDVCAENCTATLADLEAFIASSGREEEGKE 183
            M A T   N+W+ A DG L  VKE ++ GG+DVNS D+FGYT +HAA SY   E++++L+ +G DV+V D D DTPL V E V  A+ L+  GADP+  N  G  P   A +EG   VA YL  +     L TE ++   +A  Q  N+ E+     A      +  +E        EEE +E
Sbjct:    1 MRAPTSQDNLWVAAGDGQLDRVKELIE-GGMDVNSHDQFGYTAMHAAVSYNQTEIVKYLLDKGADVNVEDFDKDTPLFVAETVEMAQILLDRGADPKKVNEDGFTPALTAFQEGWKEVAEYLANITK-EVLPTEDLEDISLAHVQHDNNDEDYDPEVANKMQEIINRIEEQGGEFANEEELRE 181          
The following BLAST results are available for this feature:
BLAST of EWM26677.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108765|gb|EWM26677.1|5.688e-144100.00hypothetical protein Naga_100001g196 [Nannochlorop... [more]
gi|553178015|ref|XP_005852515.1|1.840e-14399.50putative ankyrin repeat protein [Nannochloropsis g... [more]
gi|1032649427|gb|OAQ30714.1|3.281e-3450.81ankyrin [Mortierella elongata AG-77][more]
gi|929764493|ref|XP_014157227.1|2.129e-3243.70hypothetical protein SARC_04421 [Sphaeroforma arct... [more]
gi|1018855543|dbj|GAT60799.1|4.451e-3239.78ankyrin [Mycena chlorophos][more]
gi|1178056394|gb|ORE11755.1|2.195e-3144.37ankyrin [Rhizopus microsporus var. microsporus][more]
gi|301119971|ref|XP_002907713.1|3.503e-3153.91conserved hypothetical protein [Phytophthora infes... [more]
gi|568036450|gb|ETM34060.1|3.578e-3150.43hypothetical protein L914_18769 [Phytophthora para... [more]
gi|576981834|gb|EUC54577.1|5.310e-3145.32ankyrin [Rhizoctonia solani AG-3 Rhs1AP][more]
gi|727150362|emb|CEG67309.1|6.111e-3139.34hypothetical protein RMATCC62417_03757 [Rhizopus m... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3928rna3928Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications