EWM26709.1, cds3908 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|585108797|gb|EWM26709.1| (Peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
Query: 1 MSSSARGFFESLVRRQTRHPHATIIRPSTRTCCKQLLMVLAGMLAMSQSFMLKSPLHAVLDGSVAVSARLAPGGIRVVMSMSCPDRRGLLEGWASVFLAVGLPHVAQPTQRAHAVKDDEYDVAFDAKQPLGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAPQTQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDATGVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
MSSSARGFFESLVRRQTRHPHATIIRPSTRTCCKQLLMVLAGMLAMSQSFMLKSPLHAVLDGSVAVSARLAPGGIRVVMSMSCPDRRGLLEGWASVFLAVGLPHVAQPTQRAHAVKDDEYDVAFDAKQPLGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAPQTQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDATGVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR
Sbjct: 1 MSSSARGFFESLVRRQTRHPHATIIRPSTRTCCKQLLMVLAGMLAMSQSFMLKSPLHAVLDGSVAVSARLAPGGIRVVMSMSCPDRRGLLEGWASVFLAVGLPHVAQPTQRAHAVKDDEYDVAFDAKQPLGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAPQTQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDATGVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|922858289|gb|KOO26442.1| (fk506 binding-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 175.637 bits (444), Expect = 1.080e-47 Identity = 106/262 (40.46%), Postives = 148/262 (56.49%), Query Frame = 0
Query: 118 DEYDVAFDAKQPLGLALEDF-------GQNGKYRTYVSKTLRGSQATSKG-IRIPALVVAVNGKNVEGLPRKMV-VQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAPQ--TQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDATGVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIP 368
DEY + FD+ +PLGL L+D + G R V+ + G QA S G ++I +VVAV+G NVE K V +L+R EGR + VT +D F E L++ A I+T++AP Q L++++ V C A+ GDL+EI+Y RL DGT D G+ GR GD +L FVLG+Q AG P WD+ LVG CVGE+R + P VL FGAKGL ++ +PP+A ++YDVE++ IN + P
Sbjct: 138 DEYSLEFDSSRPLGLELKDLRVGFEYGTREGSSRVLVANVVAGGQAASTGKVQIDDIVVAVDGVNVERESAKEVSARLVRAKAEGR-------PVQVTLKDALAFNERLNDLPKDREEAMAPIATRVAPGGGPLGEPEQVLSIRRLEVQSRCTRNAQSGDLVEIRYTGRLADGTVFD--GMELAGRFGDDSLQFVLGKQPAGQFPPAWDVGLVGMCVGERRLLDVPPVLGFGAKGLPKRNVPPNARLLYDVELLAINALSTP 390
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|1210531476|dbj|GAX09832.1| (FK506-binding protein 14 [Fistulifera solaris]) HSP 1 Score: 159.458 bits (402), Expect = 4.776e-42 Identity = 100/263 (38.02%), Postives = 139/263 (52.85%), Query Frame = 0
Query: 130 LGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAP---QTQ--------------AREAQTLTVKKTYVPEICQTGAKYGDLLEIKY-ATRLEDGTFLDATGVST-----PGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
LGL L D R YV GS A+ GI+ +VV +NG++ E + V L+ +A + E + FRDPA F L + ++TQ+AP TQ A++ Q +TV + P++C GA+ DLLEI Y T +E G D + V PGRG D +L+FVLG+Q G P GWD+ LVG CVGE+RR+ P LA+G+KGL R+GIPPDAT+ YDV ++ +NG + P+
Sbjct: 97 LGLELADLDFKTNLRVYVKSVQMGSLASEVGIQQNWVVVGLNGQSTERTNAEGVAVLLSEALNDKRDYVE-----LRFRDPAVFRNKLQNLNV-----NESVTTQVAPAGDTTQRNQDGSVQKGRTVTAQDDQKVTVSQLMPPKMCTRGAQVDDLLEISYIGTVVETGAIFDGSAVKINGQGIPGRGDDVSLFFVLGKQPFGQFPPGWDVGLVGCCVGERRRLLIPPALAYGSKGLPRRGIPPDATLQYDVTLVSLNGLSTPQ 349
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|299473040|emb|CBN77433.1| (FK506-binding protein 2 precursor [Ectocarpus siliculosus]) HSP 1 Score: 159.073 bits (401), Expect = 8.084e-42 Identity = 101/293 (34.47%), Postives = 154/293 (52.56%), Query Frame = 0
Query: 98 LAVGLPHVAQPTQRAHAVKDDEYDVAFDAKQPLGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPA--LVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKS-------------TPGGGEGAEISTQLAPQTQAREAQT---LTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDATGVSTPGR-----GGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNI 367
L +G+ + A++ DE++ FD +G+ LED G R V + + GS A ++ RI A ++V+ NG ++E ++I+ + L + RD + F +LL T GG E IST+++P+ RE Q L K+ C GA+ GDLLEI+Y +LEDG D + + GR GD+TL+FVLG+Q G P GWDL L+G CVGE R I P +L +GA+G+ ++G+P +AT++YDV++IG+NG N+
Sbjct: 72 LGIGIVSTLLEPDASRALESDEFEEVFD-DDAIGIELEDVKYKGSSRVLVKRVVPGS-AAARHPRIKADLVLVSANGVDLERQSATAAKKIIKTSSR---------PLTLVLRDNSLFQQLLKPAPPTSPDNEATGVAVTNGGFE--PISTKVSPEGNGREEQVVKLLNSDKSAECNSCGQGARRGDLLEIEYTAKLEDGKVFDGSSIKVNGREVVGRAGDTTLFFVLGKQPKGQFPPGWDLLLIGMCVGETRLISVPPLLGYGAQGMPKRGVPANATLLYDVKLIGVNGVNM 351
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|1210526705|dbj|GAX14353.1| (FK506-binding protein 14 [Fistulifera solaris]) HSP 1 Score: 155.992 bits (393), Expect = 9.861e-41 Identity = 94/263 (35.74%), Postives = 137/263 (52.09%), Query Frame = 0
Query: 130 LGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAP-----------------QTQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKY-ATRLEDGTFLDATGVST-----PGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
+GL L D R YV GS A+ GI+ +V+ +NG++ E + V ++ A + G + + FRDPA F L S ++TQ+AP + +++ Q +TV + P++C GA+ DLLEI Y T +E G D + V PGRG D +L+FVLG+Q G P GWD+ LVG CVGE+RR+ P LA+G+ GL R+GIPPDAT+ YDV ++ +NG + P+
Sbjct: 98 IGLELADLDFKTNLRVYVKSIQMGSLASEVGIQQNWVVIGLNGQSTERTNAEGVAMMLSQALNDK-----GDYVELRFRDPAVFRNKLQNLS-----PDESVTTQVAPAGDTTQRNQDGSVQKGRKVTSQDDQKVTVSQLIPPKMCTRGAQVDDLLEISYIGTVVETGAIFDGSAVKINGQGIPGRGDDVSLFFVLGKQPFGQFPPGWDVGLVGCCVGERRRLLIPPALAYGSTGLPRRGIPPDATLQYDVTLVSLNGLSTPQ 350
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|397622139|gb|EJK66587.1| (hypothetical protein THAOC_12486 [Thalassiosira oceanica]) HSP 1 Score: 136.732 bits (343), Expect = 5.143e-33 Identity = 92/267 (34.46%), Postives = 135/267 (50.56%), Query Frame = 0
Query: 130 LGLALEDFGQNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRK-MVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKF---MELLSEKSTPGGGEGAEISTQLAP---QTQAREA--------------QTLTVKKTYVPEICQTGAKYGDLLEIKYATRL-EDGTFLDATGVST-----PGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
+GL L + +R + S A GI+ +VV++ G N E + + ++ + + ++L +TFRDPAKF +E K T GE +ST++AP TQ E Q +TV + P++C A DL+EI Y ++ E G D + V PGRG D ++YFVLG+Q G P GWD+ L G CVGE+RR+ P VL FGA+G R+ IPP+AT+ YDV ++ +NG P+
Sbjct: 138 IGLELGEVSFRTNFRVIIKSVAPNSLAQKLGIQPNWVVVSIGGANGERTNAAGAAIYFSQAVKKVLSSPDDSTTLSITFRDPAKFRDELESFPSKDT-SSGELPTVSTKVAPAGDTTQRFEDGSLRRGATVREQGDQVVTVTQLVPPQMCNRRATTDDLVEISYLGQIVETGEIFDGSAVKINGNGIPGRGNDISVYFVLGKQPFGQFPPGWDVGLNGMCVGERRRLIIPPVLGFGAEGNPRRRIPPNATLQYDVTLVSLNGLATPQ 403
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|219111141|ref|XP_002177322.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411857|gb|EEC51785.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 127.487 bits (319), Expect = 2.994e-32 Identity = 60/135 (44.44%), Postives = 88/135 (65.19%), Query Frame = 0
Query: 241 AREAQTLTVKKTYVPEICQTGAKYGDLLEIKY------ATRLEDGTFLDATGVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
++ Q +TV + P++C+ GA DLLEI Y ++ DG+ + G PGRG D +LYFVLG+Q G P GWD+ +VG CVGE+RR+ P LA+G+KG+ R+GIPPDAT+ YD+ ++ +NG + P+
Sbjct: 3 SQAEQQITVSQLIPPKLCKRGATTDDLLEISYRGSVVETGQVFDGSAIKIDGGGIPGRGDDVSLYFVLGKQPFGQFPPGWDVGMVGQCVGERRRLIIPPALAYGSKGVPRRGIPPDATLQYDITLVSLNGFSTPQ 137
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|551634261|ref|XP_005819976.1| (hypothetical protein GUITHDRAFT_120829 [Guillardia theta CCMP2712] >gi|428163950|gb|EKX32996.1| hypothetical protein GUITHDRAFT_120829 [Guillardia theta CCMP2712]) HSP 1 Score: 131.339 bits (329), Expect = 2.483e-31 Identity = 95/272 (34.93%), Postives = 145/272 (53.31%), Query Frame = 0
Query: 117 DDEYDVAFDAKQPLGLALED--FGQ-----NGKYRTYVSKTLRGSQATSKG----IRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFME-LLSEKSTPGGGEGAEISTQLAPQTQAREAQTLTVKKTYVPEIC-QTGAKYGDLLEIKYATRLEDG-TFLDATGVSTPGRG-GDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGI------PPDATIVYDVEVIGINGNNI 367
DDE+ + F + PLG+ L + F Q R V G QA + G +R LVV++NGKN+EG+ ++L+R +E + +L + FRDP F E LL+ K EG +STQ+ Q+ ++ L VK +PE C A+ GD+LE+KY L D D + ++ G GD +LYFVL Q P+ W++ L+G C+GE+RR+ P L +G +G+ + I PP+A ++YDV+++GING N+
Sbjct: 60 DDEFSIDF-GQGPLGMDLIEVRFPQGVPREKQSSRIIVDAVKAGGQAETLGKAKRLRPQVLVVSINGKNIEGMRASDALKLLR--EEKKKSDENNQALQIVFRDPLIFKEKLLNIK------EGGAVSTQVGVQS----SEELVVKTLKMPEDCGAVRAQQGDVLEVKYTGYLADTMEVFDGSSINQNGNFFGDQSLYFVL-NQGQRQAPRAWEVGLLGMCIGEERRLVVPPSLGYGREGVPKGKIVPKLPVPPNAKLIYDVKLVGINGINV 317
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|873230429|emb|CEM11063.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 129.798 bits (325), Expect = 1.210e-30 Identity = 88/239 (36.82%), Postives = 130/239 (54.39%), Query Frame = 0
Query: 129 PLGLALEDFGQNGKYRTYVSKTLRGSQATSK-GIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAPQTQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDAT---GVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGIN 363
PLG+ LE+ + K + V+ GS+A + IR L+ +VNG++V+GL V LIR +E GEG+ L + FR S +G + A RE Q + + + +PE+C AK GDLLE++Y RLEDG +D++ G S PG+G S++Y +LG++ + + + L C GEKRRI P AFG++GL K IPPDAT++YDVE++ I
Sbjct: 151 PLGIELEETAEGIKVKQLVA----GSEAANNPDIRPGLLLESVNGQSVQGLRLSDVKSLIRMRREMGEKEGEGT-LRLAFRGEGGGRGERDAVS-----QGVADTIDKA----KREGQVI-IDRRKIPEVCSLKAKRGDLLELRYVGRLEDGKLIDSSRLDGRSVPGKGAGSSIYLLLGDKPPRKLIRKFQSGLYSMCEGEKRRITIPPSAAFGSEGLPEKAIPPDATLIYDVELVKIT 374
BLAST of EWM26709.1 vs. NCBI_GenBank
Match: gi|1072231776|gb|OEU16508.1| (peptidyl-prolyl cis-trans isomerase, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 119.013 bits (297), Expect = 4.110e-29 Identity = 59/134 (44.03%), Postives = 83/134 (61.94%), Query Frame = 0
Query: 242 REAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRL-EDGTFLDAT-----GVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369
++ Q ++V + P++C+ G+ DL+EI Y R+ E G D + G PGRG D ++ FVLG+Q G P GWD+ L CVGE+RRI P VLA+G KGL R+GIP AT+ YDV ++ +NG +PR
Sbjct: 3 QDDQRISVSQLIPPKMCKRGSTLDDLMEISYIGRVVETGNIFDGSAIMVDGEGIPGRGNDVSISFVLGKQPFGQFPPGWDVGLTDMCVGERRRILVPPVLAYGEKGLPRRGIPSQATLQYDVTLVSLNGLAMPR 136 The following BLAST results are available for this feature:
BLAST of EWM26709.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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