EWM26786.1, cds3883 (CDS) Nannochloropsis gaditana

Overview
NameEWM26786.1
Unique Namecds3883
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:338811..338882 -
Alignment locationCM002462.1:338409..338733 -
Alignment locationCM002462.1:338162..338274 -
Alignment locationCM002462.1:337849..338034 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26786.1
ProductUDP-N-acetylglucosamine transferase
Orig transcript idgnl|cribi|Naga_100018g10.2766.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:338811..338882 -
CM002462.1supercontigCM002462.1:338409..338733 -
CM002462.1supercontigCM002462.1:338162..338274 -
CM002462.1supercontigCM002462.1:337849..338034 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016758transferase activity, transferring hexosyl groups
GO:0030246carbohydrate binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006629lipid metabolic process
GO:0005975carbohydrate metabolic process
GO:0030259lipid glycosylation
Vocabulary: INTERPRO
TermDefinition
IPR007235Glyco_trans_28_C
Homology
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|585108877|gb|EWM26786.1| (UDP-N-acetylglucosamine transferase [Nannochloropsis gaditana])

HSP 1 Score: 475.707 bits (1223), Expect = 7.203e-170
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query:    1 MGTSTARKLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGFSSPDPVGTRGRYHEK 231
            MGTSTARKLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGFSSPDPVGTRGRYHEK
Sbjct:    1 MGTSTARKLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGFSSPDPVGTRGRYHEK 231          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|1183504823|gb|ORZ28391.1| (glycosyltransferase family 1 protein [Lobosporangium transversale])

HSP 1 Score: 132.494 bits (332), Expect = 3.279e-35
Identity = 85/214 (39.72%), Postives = 113/214 (52.80%), Query Frame = 0
Query:    4 STARKLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGFS 217
            ST R  +FVTVGTTRFD L+ AIS+PD L+ +   GFT L +Q G S  PT+                            L ++        +T   I   E++ +  Y+YK SL  DM  ADLIISHAGAGS++E L L K L+VVVN  LMD+HQQEL  A+ ++GYLV       +G     D+   SL+  P+P   L    LD+ +GF+
Sbjct:    2 STHRS-IFVTVGTTRFDKLVNAISSPDLLQLMHDLGFTHLSLQHGNSIVPTL---------------------------FLPTIDNSEATTTATVTTIVKVESMQIEVYKYKASLHDDMINADLIISHAGAGSILEALRLQKKLIVVVNEDLMDNHQQELGSALHEQGYLVYCNVFRDLGKALR-DKGYESLVPFPAPNAKLFADFLDEHLGFN 186          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|953494122|emb|CEG43716.1| (udp-n-acetylglucosamine transferase [Plasmopara halstedii])

HSP 1 Score: 123.25 bits (308), Expect = 9.802e-32
Identity = 81/210 (38.57%), Postives = 105/210 (50.00%), Query Frame = 0
Query:   11 FVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGFSSPD 220
            FVTVGTT+FDALIEA+ T   L  L  +GFT + +QIG                                         + V + S SG +       +S+YR+    + D+ AADLIISHAGAGS+M+GL L K L+VVVNT LMD+HQ ELA AM    + + T   G+ G+L+  D W   L L P P     P L+D  MG +  D
Sbjct:    4 FVTVGTTKFDALIEALDTDACLSALVSRGFTSIRMQIGHG---------------------------------------KHVPRASFSGLL-------MSYYRHDPQYKRDVAAADLIISHAGAGSIMDGLALEKKLVVVVNTMLMDNHQIELAEAMADHNFCIQTTVQGLRGVLETGD-WDH-LQLYPQPDEQAFPDLVDAVMGVAKAD 165          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|671693584|emb|CDS08315.1| (hypothetical protein LRAMOSA02263 [Lichtheimia ramosa])

HSP 1 Score: 122.865 bits (307), Expect = 1.221e-31
Identity = 74/207 (35.75%), Postives = 109/207 (52.66%), Query Frame = 0
Query:   10 VFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
            VFVTVG+T FD L++ ++T   L  L   G++ +++Q G+S +          Y R V              S+L                   N+++++  Y YK S+  DM+ A LIISHAG+GS+++ L L K L+VV NT+LMD+HQ ELA AMQ+K Y   ++PNG+V  ++  D   R +   P+P       LLD  MGF
Sbjct:    3 VFVTVGSTGFDELVDVVTTASFLSALKSLGYSSIVVQYGSSEKV---------YSRNV--------------SQLP------------------NDSITMQGYTYKSSIDDDMKRASLIISHAGSGSMLQALRLHKRLIVVSNTSLMDNHQVELAQAMQQKNYCCCSDPNGLVDAIR--DASTREMAPFPNPATEAFTELLDHHMGF 166          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|402911136|ref|XP_003918197.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X9 [Papio anubis])

HSP 1 Score: 120.553 bits (301), Expect = 7.924e-31
Identity = 75/212 (35.38%), Postives = 104/212 (49.06%), Query Frame = 0
Query:    8 KLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIG---ASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
            K VFVTVGTT FD LI  +S PD+L+ +   G+  L++QIG     PEP                                                   E+ ++  YRYKDSL+ D++ ADL+ISHAGAGS +E L  GK L+VV+N  LM++HQ ELA  +QK+G+L     + + G+LQ+ D    +L   P   P    A LD+ +G 
Sbjct:    2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPF------------------------------------------------STESFTLDVYRYKDSLKEDIQKADLVISHAGAGSCLEALEKGKPLVVVINEKLMNNHQLELAKQLQKEGHLFYCTCSTLPGLLQSMD--LSTLKCYPPGQPEKFSAFLDKVVGL 163          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|544522471|ref|XP_005594452.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X8 [Macaca fascicularis] >gi|795395954|ref|XP_011754480.1| PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X9 [Macaca nemestrina] >gi|967506822|ref|XP_014983529.1| PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X6 [Macaca mulatta] >gi|355705078|gb|EHH31003.1| hypothetical protein EGK_20833 [Macaca mulatta])

HSP 1 Score: 120.168 bits (300), Expect = 1.286e-30
Identity = 75/212 (35.38%), Postives = 103/212 (48.58%), Query Frame = 0
Query:    8 KLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIG---ASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
            K VFVTVGTT FD LI  +S PD+L+ +   G+  L++QIG     PEP                                                   E+ ++  YRYKDSLR D++ ADL+ISHAGAGS +E L  GK L+VV+N  LM++HQ ELA  + K+G+L     + + G+LQ+ D    +L   P   P    A LD+ +G 
Sbjct:    2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPF------------------------------------------------STESFTLDVYRYKDSLREDIQKADLVISHAGAGSCLEALEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLFYCTCSTLPGLLQSMD--LSTLKCYPPGQPEKFSAFLDKVVGL 163          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|795157565|ref|XP_011839878.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X4 [Mandrillus leucophaeus] >gi|795401707|ref|XP_011943080.1| PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X6 [Cercocebus atys])

HSP 1 Score: 119.013 bits (297), Expect = 4.385e-30
Identity = 74/212 (34.91%), Postives = 103/212 (48.58%), Query Frame = 0
Query:    8 KLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIG---ASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
            K VFVTVGTT FD LI  +S PD+L+ +   G+  L++QIG     PEP                                                   E+ ++  YRYKDSL+ D++ ADL+ISHAGAGS +E L  GK L+VV+N  LM++HQ ELA  + K+G+L     + + G+LQ+ D    +L   P   P    A LD+ +G 
Sbjct:    2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPF------------------------------------------------STESFTLDVYRYKDSLKEDIQKADLVISHAGAGSCLEALEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLFYCTCSTLPGLLQSMD--LSTLKCYPPGQPEKFSAFLDKVVGL 163          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|1044412176|ref|XP_017357629.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X10 [Cebus capucinus imitator])

HSP 1 Score: 118.627 bits (296), Expect = 4.936e-30
Identity = 74/212 (34.91%), Postives = 104/212 (49.06%), Query Frame = 0
Query:    8 KLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIG---ASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
            K VFVTVGTT FD LI  +S PD+L+ +   G++ L++QIG     PEP                                                   E+ ++  YRYKDSL+ D++ ADL+ISHAGAGS +E L  GK L+VV+N  LM++HQ ELA  + K+G+L     + + G+LQ+ D    +L   P   P    A LD+ +G 
Sbjct:    2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYSRLILQIGRGTVVPEPF------------------------------------------------STESFTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLFYCTCSTLPGLLQSMD--LSTLKCYPPGQPEKFSAFLDKVVGL 163          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|1069881837|ref|XP_018229287.1| (hypothetical protein T551_02072 [Pneumocystis jirovecii RU7] >gi|968584775|gb|KTW29456.1| hypothetical protein T551_02072 [Pneumocystis jirovecii RU7])

HSP 1 Score: 118.627 bits (296), Expect = 5.034e-30
Identity = 67/211 (31.75%), Postives = 106/211 (50.24%), Query Frame = 0
Query:    7 RKLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIGASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGFS 217
             K VFVTVG+TRFDALI +I   +  + L   GF+ +L+Q G S              + + +N ++                               E + V+ + Y   +    + +DLIISHAG+GS++E L L K L+VVVN  LMD+HQ EL   M ++ YL+++ P  ++  ++N++  ++ L   P PT  L P +LD+ MG +
Sbjct:    4 EKTVFVTVGSTRFDALISSIQQKEVQKALIAHGFSKILVQYGNS--------------QNIFNNWESV------------------------------EGLKVNGFDYSKDIEKAFKESDLIISHAGSGSIIEALELKKQLIVVVNETLMDNHQIELTEEMSRQKYLISSTPKNLLHTIENFN--EKELKPFPFPTKSLFPIILDKHMGLN 168          
BLAST of EWM26786.1 vs. NCBI_GenBank
Match: gi|332226161|ref|XP_003262257.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X5 [Nomascus leucogenys])

HSP 1 Score: 118.627 bits (296), Expect = 5.863e-30
Identity = 74/212 (34.91%), Postives = 103/212 (48.58%), Query Frame = 0
Query:    8 KLVFVTVGTTRFDALIEAISTPDALECLAVQGFTDLLIQIG---ASPEPTVGTAAGSDYVREVHDNKDTETKKGVLESRLTSLLRRRVAKRSTSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEMGF 216
            K VFVTVGTT FD LI  +S PD+L+ +   G+  L++QIG     PEP                                                   E+ ++  YRYKDSL+ D++ ADL+ISHAGAGS +E L  GK L+VV+N  LM++HQ ELA  + K+G+L     + + G+LQ+ D    +L   P   P    A LD+ +G 
Sbjct:    2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPF------------------------------------------------STESFTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLIVVINEKLMNNHQLELAKQLHKEGHLFYCTCSTLPGLLQSMD--LSTLKCYPPGQPEKFSAFLDKVVGL 163          
The following BLAST results are available for this feature:
BLAST of EWM26786.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108877|gb|EWM26786.1|7.203e-170100.00UDP-N-acetylglucosamine transferase [Nannochlorops... [more]
gi|1183504823|gb|ORZ28391.1|3.279e-3539.72glycosyltransferase family 1 protein [Lobosporangi... [more]
gi|953494122|emb|CEG43716.1|9.802e-3238.57udp-n-acetylglucosamine transferase [Plasmopara ha... [more]
gi|671693584|emb|CDS08315.1|1.221e-3135.75hypothetical protein LRAMOSA02263 [Lichtheimia ram... [more]
gi|402911136|ref|XP_003918197.1|7.924e-3135.38PREDICTED: putative bifunctional UDP-N-acetylgluco... [more]
gi|544522471|ref|XP_005594452.1|1.286e-3035.38PREDICTED: putative bifunctional UDP-N-acetylgluco... [more]
gi|795157565|ref|XP_011839878.1|4.385e-3034.91PREDICTED: putative bifunctional UDP-N-acetylgluco... [more]
gi|1044412176|ref|XP_017357629.1|4.936e-3034.91PREDICTED: putative bifunctional UDP-N-acetylgluco... [more]
gi|1069881837|ref|XP_018229287.1|5.034e-3031.75hypothetical protein T551_02072 [Pneumocystis jiro... [more]
gi|332226161|ref|XP_003262257.1|5.863e-3034.91PREDICTED: putative bifunctional UDP-N-acetylgluco... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3892rna3892Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications