EWM26804.1, cds3881 (CDS) Nannochloropsis gaditana

Overview
NameEWM26804.1
Unique Namecds3881
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:335311..335480 -
Alignment locationCM002462.1:335195..335267 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26804.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100018g12.2784.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:335311..335480 -
CM002462.1supercontigCM002462.1:335195..335267 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26804.1 vs. NCBI_GenBank
Match: gi|585108895|gb|EWM26804.1| (hypothetical protein Naga_100018g12 [Nannochloropsis gaditana])

HSP 1 Score: 170.629 bits (431), Expect = 6.181e-54
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 MTKARSGAMNRSWFVVLVHLYGWMECCLKLSTTNPIMYLHLLDACCKLPRTIQFFPAGKKQTGTDGMMSWVEDERGMMVM 80
            MTKARSGAMNRSWFVVLVHLYGWMECCLKLSTTNPIMYLHLLDACCKLPRTIQFFPAGKKQTGTDGMMSWVEDERGMMVM
Sbjct:    1 MTKARSGAMNRSWFVVLVHLYGWMECCLKLSTTNPIMYLHLLDACCKLPRTIQFFPAGKKQTGTDGMMSWVEDERGMMVM 80
The following BLAST results are available for this feature:
BLAST of EWM26804.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108895|gb|EWM26804.1|6.181e-54100.00hypothetical protein Naga_100018g12 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3890rna3890Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications