EWM26835.1, cds3879 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26835.1 vs. NCBI_GenBank
Match: gi|585108926|gb|EWM26835.1| (Siva [Nannochloropsis gaditana]) HSP 1 Score: 724.931 bits (1870), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MFQPPSTWGWSRRDENAAPPPPSFAASTNVSCKFEDKTKGPRRQYPTTFANKGVSVGRKRQVLGALSSPAVSGHSEPEGNKHTEFVSARPWKQPCLQPCTQYTSNRIMSDTVIQEPLNPCGMEEDGGDDREECCIPSNLHHAASHVTPPTLAGQSRRQTAAYRKDDVLSHPSLTSPEGMSVQQQQRQNNENRWGDAPRLASDSQRCDVCLPPPRPDDPQRCFNYSLRQSRHPQEMAAIAQWAGGLHPRLGQPPPLLSWQKQESELLAEDRLERRQQEPMLVSPGRVQSVKEAATSTAGCWASVAQCRHCERGVCKTCLRHCEACQEPFCSICSTVDYGGAFERVLCIDCGH 351
MFQPPSTWGWSRRDENAAPPPPSFAASTNVSCKFEDKTKGPRRQYPTTFANKGVSVGRKRQVLGALSSPAVSGHSEPEGNKHTEFVSARPWKQPCLQPCTQYTSNRIMSDTVIQEPLNPCGMEEDGGDDREECCIPSNLHHAASHVTPPTLAGQSRRQTAAYRKDDVLSHPSLTSPEGMSVQQQQRQNNENRWGDAPRLASDSQRCDVCLPPPRPDDPQRCFNYSLRQSRHPQEMAAIAQWAGGLHPRLGQPPPLLSWQKQESELLAEDRLERRQQEPMLVSPGRVQSVKEAATSTAGCWASVAQCRHCERGVCKTCLRHCEACQEPFCSICSTVDYGGAFERVLCIDCGH
Sbjct: 1 MFQPPSTWGWSRRDENAAPPPPSFAASTNVSCKFEDKTKGPRRQYPTTFANKGVSVGRKRQVLGALSSPAVSGHSEPEGNKHTEFVSARPWKQPCLQPCTQYTSNRIMSDTVIQEPLNPCGMEEDGGDDREECCIPSNLHHAASHVTPPTLAGQSRRQTAAYRKDDVLSHPSLTSPEGMSVQQQQRQNNENRWGDAPRLASDSQRCDVCLPPPRPDDPQRCFNYSLRQSRHPQEMAAIAQWAGGLHPRLGQPPPLLSWQKQESELLAEDRLERRQQEPMLVSPGRVQSVKEAATSTAGCWASVAQCRHCERGVCKTCLRHCEACQEPFCSICSTVDYGGAFERVLCIDCGH 351
BLAST of EWM26835.1 vs. NCBI_GenBank
Match: gi|929747845|ref|XP_014148906.1| (hypothetical protein SARC_12463 [Sphaeroforma arctica JP610] >gi|906939118|gb|KNC75004.1| hypothetical protein SARC_12463 [Sphaeroforma arctica JP610]) HSP 1 Score: 59.6918 bits (143), Expect = 1.110e-7 Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0
Query: 288 SVKEAATSTAGCW-----ASVAQCRHCERGVCKTCLRHCEACQEPFCSICSTVDYGGAFERVLCIDCGH 351
S+ A S CW + A+C CER C+ C R CE C E FCS+CST +Y ++R C+DC
Sbjct: 13 SLPMATPSVHKCWVCSVMSECAECAFCERETCERCQRQCEGCLESFCSLCSTTNYDEKYDRTFCLDCNE 81
BLAST of EWM26835.1 vs. NCBI_GenBank
Match: gi|1183468038|gb|ORY91967.1| (hypothetical protein BCR43DRAFT_497566 [Syncephalastrum racemosum]) HSP 1 Score: 57.7658 bits (138), Expect = 7.756e-7 Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 302 SVAQCRHCERGVCKTCLRHCEACQEPFCSICSTVDYGGAFERVLCIDCGH 351
+V C HCE VC C+ C ACQEP+CS CS +DY + ERV+C C +
Sbjct: 78 AVYACSHCEFVVCSNCIHPCSACQEPYCSGCSIIDYSHSSERVICRTCQY 127 The following BLAST results are available for this feature:
BLAST of EWM26835.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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