EWM26820.1, cds3872 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|585108911|gb|EWM26820.1| (nucleoredoxin-like protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 337.806 bits (865), Expect = 1.944e-117 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 Query: 1 MGSTILKLLRDAELVRVGGAAPFLSSGFDALKGKTLLLYFSASWCPPCRRFTPVLKEFYEAVATKHPVEVVWVSSDDSQMEWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKWDL 164 MGSTILKLLRDAELVRVGGAAPFLSSGFDALKGKTLLLYFSASWCPPCRRFTPVLKEFYEAVATKHPVEVVWVSSDDSQMEWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKWDL Sbjct: 1 MGSTILKLLRDAELVRVGGAAPFLSSGFDALKGKTLLLYFSASWCPPCRRFTPVLKEFYEAVATKHPVEVVWVSSDDSQMEWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKWDL 164
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|1173951962|gb|OQR99727.1| (hypothetical protein ACHHYP_04626 [Achlya hypogyna]) HSP 1 Score: 112.849 bits (281), Expect = 8.086e-29 Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 0 Query: 5 ILKLLRDAELVRVGGAAPFLSSGFDALKGKTLLLYFSASWCPPCRRFTPVLKEFYEAV-ATKHPVEVVWVSSD-DSQMEWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 + L+ LV GAA LS+ KTL LYF+A WCP CR F P L EFY V + H +++V+V SD ++ + + ++ +PFE+ LR LK++ GVCA KE+ +VG+ +R GIP+L VV G ++ + G ++++ SG A L+ W Sbjct: 1 MAHFLQGTTLVTAAGAAKQLSA-------KTLALYFAADWCPDCRDFQPKLNEFYSEVNSASHQLDIVFVGSDATAEDQLAHFRDKQGSWLMIPFEDP-LRNELKRKYGVCAGKEKDAVGVVDRVGGIPSLVVVTAAGDVIDLNGADKVSASGAAALNAW 152
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|813150929|ref|XP_012201111.1| (hypothetical protein SPRG_06342 [Saprolegnia parasitica CBS 223.65] >gi|641534338|gb|KDO28291.1| hypothetical protein SPRG_06342 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 112.079 bits (279), Expect = 1.533e-28 Identity = 54/132 (40.91%), Postives = 82/132 (62.12%), Query Frame = 0 Query: 33 GKTLLLYFSASWCPPCRRFTPVLKEFYEAV-ATKHPVEVVWVSSDDSQM-EWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 KTL LYF+A WCP CR F P L EFY V AT H +++V+V SD ++ + + + + +PF + LR LK++ GVCA KE+ +VG+ +R GIP+L VV P+G ++ + G ++++ G A L W Sbjct: 22 AKTLALYFAADWCPDCRDFQPTLNEFYRQVNATSHELDIVFVGSDATEADQLAHFREKHGPWLMIPFADP-LRDELKRKYGVCAGKEKEAVGVTDRVGGIPSLVVVSPNGDVIDLHGADKVSADGAAALQAW 152
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|1173959964|gb|OQS06136.1| (hypothetical protein THRCLA_20432 [Thraustotheca clavata]) HSP 1 Score: 109.768 bits (273), Expect = 1.079e-27 Identity = 53/135 (39.26%), Postives = 85/135 (62.96%), Query Frame = 0 Query: 30 ALKGKTLLLYFSASWCPPCRRFTPVLKEFYEAVATK-HPVEVVWVSSDDSQMEWGE-YGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 +L GK LYF+A WCP CR F P L FY+ V K H ++++VSSD+++ + + Y + + +PFE+ L+ LK++ GVCA +EQ +VG+QER GIP++ +V +G L+ + G ++I G A + +W Sbjct: 10 SLSGKVHALYFAADWCPDCRDFQPTLNAFYDKVNEKEHVFDIIFVSSDETEQDQEQHYREKQRPWQVIPFES-PLKNELKRKYGVCAGREQQAVGVQERLGGIPSVVIVAANGDLIDLHGVDKIESLGAAAIQEW 143
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|695369272|ref|XP_009514012.1| (hypothetical protein PHYSODRAFT_283995 [Phytophthora sojae] >gi|348686923|gb|EGZ26737.1| hypothetical protein PHYSODRAFT_283995 [Phytophthora sojae]) HSP 1 Score: 105.145 bits (261), Expect = 9.405e-26 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0 Query: 33 GKTLLLYFSASWCPPCRRFTPVLKEFYEAVATKHPVEVVWVSSDDS-QMEWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 GK L LYF+A WCP CR F P L FY+A + ++VV+V SD S + + + ++ VPFE + RT+LK++ GVCA E + RK GIPTL V++PDG ++ + ++I R GI L KW Sbjct: 28 GKVLALYFAADWCPDCRAFQPALNSFYKA--ARDQIDVVFVGSDASAKDQRAHFEDKQGPWWMVPFEG-ETRTQLKRKFGVCAGAEVRVLSPITRKGGIPTLVVIRPDGEVVDFDAADKIERDGIKALAKW 155
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|551636667|ref|XP_005821157.1| (hypothetical protein GUITHDRAFT_119670 [Guillardia theta CCMP2712] >gi|428165175|gb|EKX34177.1| hypothetical protein GUITHDRAFT_119670 [Guillardia theta CCMP2712]) HSP 1 Score: 104.375 bits (259), Expect = 1.319e-25 Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 0 Query: 42 ASWCPPCRRFTPVLKEFYEAV--ATKHPVEVVWVSSDDSQMEWGE-YGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 A WCP CR F P LK FYE V + E+V+VSS++S+ E + K + AVP+ LR LK++ GVCA KEQA+V + R+ GIPTL V+K DG+ LTI+G EI+ SG+ W Sbjct: 11 AHWCPQCREFDPELKRFYETVNGGGEKRFEIVFVSSEESEAATNETHNKYHGDWLAVPY-GSSLRNELKRKFGVCAGKEQAAVKVNPRRSGIPTLLVLKEDGSELTIDGASEIS-SGVKAFESW 132
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|294868286|ref|XP_002765462.1| (thioredoxin, putative [Perkinsus marinus ATCC 50983] >gi|239865505|gb|EEQ98179.1| thioredoxin, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 104.76 bits (260), Expect = 1.807e-25 Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 0 Query: 31 LKGKTLLLYFSASWCPPCRRFTPVLKEFYEAVATKHP--VEVVWVSSDDSQMEWGEYGKI-MAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGI--QERKRGIPTLAVV-KPDGTLLTIEGDEEITRSGIAVLHKW 162 LK + LYF+A WCP CR FTP + +FYE V K+P +E++++SSD S+ E Y + M + VPF ++ R LK+E GVCA KE +G+ +RK GIPTL V+ K T+ + +I + G A + +W Sbjct: 28 LKKDIIALYFAAHWCPDCRAFTPTVNKFYEDVKAKNPDKLEIIFISSDKSENEQVAYHQNDMPDWLRVPFNDKRTRAVLKKEYGVCAKKEMEDIGMSDSQRKAGIPTLVVLSKNRRTVKVFDAGADIEKYGDAAVDRW 165
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|294945532|ref|XP_002784727.1| (thioredoxin, putative [Perkinsus marinus ATCC 50983] >gi|239897912|gb|EER16523.1| thioredoxin, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 104.375 bits (259), Expect = 2.342e-25 Identity = 58/138 (42.03%), Postives = 82/138 (59.42%), Query Frame = 0 Query: 31 LKGKTLLLYFSASWCPPCRRFTPVLKEFYEAVATKHP--VEVVWVSSDDSQMEWGEYGKI-MAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGI--QERKRGIPTLAVV-KPDGTLLTIEGDEEITRSGIAVLHKW 162 LK + LYF+A WCP C FTP +K+FYE V K+P +E+++VSSD S+ E Y + M + VPF ++ R LK+E GVCA KE +GI +RK GIPTL V+ K T+ + +I + G A + +W Sbjct: 28 LKKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQIAYHRNDMPDWLRVPFNDKRTRATLKKEYGVCAKKEMEDIGISDSQRKAGIPTLVVLSKNRRTVKVFDAGADIEKYGEAAVDRW 165
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|698793508|ref|XP_009829786.1| (hypothetical protein H257_06299 [Aphanomyces astaci] >gi|574115353|gb|ETV80839.1| hypothetical protein H257_06299 [Aphanomyces astaci]) HSP 1 Score: 103.605 bits (257), Expect = 3.280e-25 Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 0 Query: 33 GKTLLLYFSASWCPPCRRFTPVLKEFYEAV-ATKHPVEVVWVSSD---DSQMEWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 KTL LYF+A WCP CR F P L +FY V A H +++V+VSSD D Q+ + + A+PF + LR LK++ VCA KE +VG+ +R GIPT+ +V G ++ I+ +I SG+ L W Sbjct: 22 AKTLALYFAADWCPDCRDFQPKLNDFYSKVNAQTHQLDIVFVSSDATEDDQL--AHFRDKQGPWLAIPFHDT-LRDELKRKYQVCAKKEMETVGVTDRVGGIPTVVIVNSSGDVVDIDAASKIESSGVDALAAW 152
BLAST of EWM26820.1 vs. NCBI_GenBank
Match: gi|695369269|ref|XP_009514011.1| (hypothetical protein PHYSODRAFT_553125 [Phytophthora sojae] >gi|348686922|gb|EGZ26736.1| hypothetical protein PHYSODRAFT_553125 [Phytophthora sojae]) HSP 1 Score: 103.219 bits (256), Expect = 5.683e-25 Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 0 Query: 8 LLRDAELVRVGGAAPFLSSGFDALKGKTLLLYFSASWCPPCRRFTPVLKEFY-EAVATKHPVEVVWVSSDDSQM-EWGEYGKIMAAYYAVPFENRDLRTRLKQEVGVCASKEQASVGIQERKRGIPTLAVVKPDGTLLTIEGDEEITRSGIAVLHKW 162 LL +LV G G D + L LYF+A+WCP CR F P L +FY +A A+K ++VV++SSD S+ + + ++ VP + ++R L+++ G+ K+ A VG+ R GIP L +++PDG +L +G +++ GI L W Sbjct: 5 LLHGTKLVNAKGETI---DGADVGQSGLLALYFAANWCPDCRAFQPKLNDFYAQANASKQQLDVVFLSSDMSEEDQQAHFSTKHGDWWMVP-RDAEIRNELRRKYGIRNGKDDAEVGVTHRNSGIPALVIIRPDGEVLDFQGAQQVENDGIKALANW 157 The following BLAST results are available for this feature:
BLAST of EWM26820.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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