EWM30302.1, cds387 (CDS) Nannochloropsis gaditana

Overview
NameEWM30302.1
Unique Namecds387
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:950522..952090 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30302.1
Producttld family protein
Orig transcript idgnl|cribi|Naga_100003g98.1819.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:950522..952090 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom
Homology
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|585112961|gb|EWM30302.1| (tld family protein [Nannochloropsis gaditana])

HSP 1 Score: 1080.47 bits (2793), Expect = 0.000e+0
Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query:    1 MSDFSPSSSPRNSTAERQADHQTPSPPPDFVVATEKTIKRWLETSALRPKLFHAPERQSDRHYYHAHNEILSPEKAHRQYMLVKDDFTKKDPEWQDDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRMSDPMERELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEVLVLMTPAHS 522
            MSDFSPSSSPRNSTAERQADHQTPSPPPDFVVATEKTIKRWLETSALRPKLFHAPERQSDRHYYHAHNEILSPEKAHRQYMLVKDDFTKKDPEWQDDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRMSDPMERELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEVLVLMTPAHS
Sbjct:    1 MSDFSPSSSPRNSTAERQADHQTPSPPPDFVVATEKTIKRWLETSALRPKLFHAPERQSDRHYYHAHNEILSPEKAHRQYMLVKDDFTKKDPEWQDDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRMSDPMERELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEVLVLMTPAHS 522          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|299471332|emb|CBN79288.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 138.272 bits (347), Expect = 5.365e-31
Identity = 101/385 (26.23%), Postives = 176/385 (45.71%), Query Frame = 0
Query:   96 DDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFK--EIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRM----SDPMERELIVKQD-IEPLRLHGTTKGADGHVS-------------------ILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPI------HPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRA 448
            +++P +G       DH ++ E  AA RR+L  + +   +++ P LLD+VP+L+ ++PE+ VY VV  +   RP +F      F A    F++ +  +FP T+  M+  GAD  + L  +  R L+P++  +HL+ + + +  +G    FR+ LAL K  + + +   +    GA WW ++ D+     F         LTH    ++  +  R ++  M     D  E E+  + D +   RL      AD                       +L +     KL+  ++P   RH+ L+++F++E HG +LD LY  CR   P ++++E   +  ++G FC D          +  + G G  FLFRL        W G +  A
Sbjct:  117 EEVPGYGGEL-RLEDHCMSAEGRAAVRRLLVTIKHMLAVEWSPSLLDVVPVLLTYMPESCVYGVVEELWGMRPLFFPHSEEEFEAWGGTFKNMVKDFFPETSKEMSKCGADEPEHLRQVLLRMLVPILPLKHLVVVWDAWFCEGSKVIFRYGLALLKMYKKRLKALKLKQGQGAQWWSKLRDWAHEPSFSFDD-----LTHKAFSLRTKSGLRPISWAMLENYHDKNEAEVKSRMDKVAGSRLDHKGVAADRADEAQPFFWPPFQLTATFPPPVLLADVPARAKLV-KWVPEILRHKRLRVVFTTEIHGYNLDLLYSHCRTVSPSLLVVEAA-NGVILGGFCSDSWQYPHAKQSQGGMYGNGQCFLFRLHPQPTTCRWQGGAVAA 493          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|813184492|ref|XP_012206418.1| (hypothetical protein SPRG_11998 [Saprolegnia parasitica CBS 223.65] >gi|641528648|gb|KDO22861.1| hypothetical protein SPRG_11998 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 129.028 bits (323), Expect = 1.182e-28
Identity = 128/459 (27.89%), Postives = 200/459 (43.57%), Query Frame = 0
Query:   72 SPEKAHRQYML-VKDDFTKKDPEWQDDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPL-LMVFLPEAVVYAVVHNM-HLHRP---FYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTH--YGTHVKRSNLDRLLA------VRMSDPMER----ELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVE 512
            SP K    Y    KD F    P      P+FG    S     L      A RR+  VL     +D C +L +L+ L L+V + EA VY ++ ++    RP   +       + LAV+   +D +   +P  A  M   GA  + +     +  L+P V     L++++ YL +G     RF++AL K  K  + A +  +GA WW  +A  T +        + TV     YG   +R N +  LA      V +S   E      L+V +   P+ L  T                   ++ ++LP  ++ + L+  + + + GR LDTLYR C N  P I++++ L  + VI A+    + P   + G  + F+  L  PAV+YA  G  TRA      F +  P   A+G+ + S    L ID  L  G SQ +  F N PL   G+E+F +  +E
Sbjct:   44 SPAKIEATYAAATKDIFGPTLPASIAAAPMFGKPTSSHVTLELVPALAVAHRRLSIVLRRLHGVDHCRVLPELMRLCLLVDISEAQVYCMMRSLLQRSRPKDEWKLPTSPAHELAVIGHLKDTVAWRYPLLATAMQRQGAWDDSYFADTIHSFLVPYVPLAVALRIVDAYLGEGPKIHCRFLMALLKLHKAPMAAEMTATGAAWWALLATRTRACSM---AEICTVAYRKWYGYLFRRQNFELRLASTPTAYVDVSTIDEYGSPLPLVVDKSAPPMLLDATRD----------------SILLTWLPATEQLKQLQRCYCAIQQGRGLDTLYRYCANIAPLIVVLQVLGCDRVIIAYLSHGVGPRDQLFGDKSCFVGSLA-PAVKYAATG--TRAK-----FVMCQPSLLAIGIDSKSSAAALEIDDGLVRGRSQATDVFGNPPL--GGTEEFDVGDIE 473          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|224003115|ref|XP_002291229.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973005|gb|EED91336.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 125.176 bits (313), Expect = 4.632e-28
Identity = 102/343 (29.74%), Postives = 158/343 (46.06%), Query Frame = 0
Query:  200 MAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEI-KWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRMSDPMERELIVKQDIE----------PLRLHGTTKGADGHVS----ILHNKRTYLKL-IASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHE--HVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEE-------RDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEVLVLM 517
            M  VGA + + L  IF R  I L+    +LQ +++++ +G    FR  L+L + I K  LKAM L     WW ++   T    F  K+ +  +   +G           L+ R S    R  I+K+ I           P+ +  T     G +S    I+  K T ++  +A +L    +   L +++S+E HGRSL  LY+ CR  +  IIL+E +  +    IG F         +  G G  FLFR+      + W  D + + ++       R+ F +A   F A+G ++D  + GL +DADL+ G S  +  F N PL G G E+F I  VEV  LM
Sbjct:    1 MNNVGALSPEGLEPIFKRFFITLLKREDVLQFMDIFVVEGCKAIFRLALSLNQLISKSDLKAMHLIDSEAWWNEIMKKTLDPSFSFKKQVDIMYPKFGK----------LSSRQSKRYPRRHILKRAISYHRKWALVNMPVYVDQTPPKPLGFISSDKPIMLAKPTSVRANLAKWLTTSLKSTKLDLIYSTEVHGRSLAALYKECRRTKHTIILVEAITGDISTTIGMFASQAWVVNPSCFGDGECFLFRVDPAPKCFNWTPDVSGSFDDNIESDAIREQFMVARNEFIAMGANSDGTN-GLRLDADLNNGESYTALGFDNEPLAGKGRERFDIGTVEVYRLM 332          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|397563417|gb|EJK43791.1| (hypothetical protein THAOC_37732 [Thalassiosira oceanica])

HSP 1 Score: 128.257 bits (321), Expect = 7.465e-28
Identity = 117/439 (26.65%), Postives = 189/439 (43.05%), Query Frame = 0
Query:  108 FHDH---PLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLL---ESGAMWWGQVADFTFS--IDFDV---------KQGLTTVLTHYGTHVKRSNLDRLLAVRMSDPMERE--LIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKL-IASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLT-RPAVRYAWVGDSTRASEERDV------------FQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEV 513
             HDH   P+  +   +  +VL     +  ++FCPLL D+  LL+ F+PE+  YA +    + R                 F D M R FP T   M  +GA T   L  I  R  +PL+  +H+L+++++Y  +G    FR    L       L A +L   +S  MWW  V  FT S    FD+         +QG   V++      +   + RL++       E E  + + Q+++P+ L       +G   I+  K +  +L ++ +LP   +   L++++SS  HGRS++  YR C      + L+E      V+G +     H   +  G G  FLFRLT  P      V  S  A E  D               +++ +F ++G+  D     L ++ DL  GS+ +   F +  L G  SE F +  VE 
Sbjct:  169 LHDHGGSPIPDKGIQSLTKVLHAARDSLGLEFCPLLPDVTCLLLSFMPESYAYATIRQSAICR-------------FAKTFSDLMARNFPQTHQAMDQIGALTAVGLDPILKRFFVPLLKRKHVLRIMDIYTSEGAHAIFRIGCTLCCLAHAHLDANVLSYCDSPRMWWEGVKRFTHSKYFHFDIFLQQQAYGSRQGSIRVMSR-PIFPRSEYVSRLISSNEEWAAENEHHIPILQEMKPIGL------VEGKCPIVLAKHSPERLSLSKWLPPALQSTRLELIYSSNYHGRSIEMFYRQCSVAIHTVTLLEVFNAGVVLGMYATQTWHNNPSGYGDGECFLFRLTPNPECFKYQVTASLTAKESLDAEEFISTIDDAGQLMISSLNFISMGVGEDGSS-ALRLNEDLTRGSTSRCINFGHADLIGDSSEVFEVGLVET 586          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|669161880|ref|XP_008616502.1| (hypothetical protein SDRG_12217 [Saprolegnia diclina VS20] >gi|530731693|gb|EQC29935.1| hypothetical protein SDRG_12217 [Saprolegnia diclina VS20])

HSP 1 Score: 125.176 bits (313), Expect = 2.551e-27
Identity = 120/457 (26.26%), Postives = 194/457 (42.45%), Query Frame = 0
Query:   72 SPEKAHRQYML-VKDDFTKKDPEWQDDLPLFGAAAPSFHDHPLTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPL-LMVFLPEAVVYAVVHNM-HLHRP---FYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLAVRMSD----PMERE------LIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVE 512
            SP K    Y    K+ F    P      P+FG  + S     L      A  R+  VL     +D C +L +L+ L L+V + EA +Y ++ ++    RP   +       + LAV+   +D +   +P  A  M   GA  + +     +   +  V     LQ+ + YL +G     RF++AL K  K  + A +  SGA WW  +A  T +     +         YG   +R N +  LA   S     P   E      L+V     P+ LH T                   +++++LP  ++ + L+  + + +HGR LDTLYR C N  P +++++ L  + VI A+    + P   + G    F+  L  PA++YA  G   +       F +  P   A+G+ + S    L ID  L  G SQ +  F+N PL   G+E+F +  +E
Sbjct:   44 SPAKIEATYAAATKEVFGPILPTSVAAAPMFGKPSSSHVTLELIPALAVAHSRLSIVLHRLHGVDHCRILPELMRLCLLVNITEAHIYCMMRSLLQRSRPKDEWKLPTSPAHELAVIGHLKDTVAWRYPLLATAMQRQGAWDDSYFADTIHNFFVLYVSLPVALQIADAYLGEGPKIHCRFLMALLKLHKVPMAAEITASGAAWWALLATRTRANSM-AEISAVAYRKWYGYLFRRQNFESRLASTPSAYVGVPTLDEYGAPLPLVVDTSAPPMLLHATRD----------------SILSTWLPATEQLKQLQRCYCAIQHGRGLDTLYRYCANISPLVVVLQVLGCDQVIVAYLSHGVGPRDQLFGDKRCFVASLA-PAMKYAATGTGAK-------FVMCQPSLLAIGIDSKSSAAALEIDEGLVRGRSQATDVFSNPPL--GGAEEFDVGDIE 473          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|397643137|gb|EJK75675.1| (hypothetical protein THAOC_02595, partial [Thalassiosira oceanica])

HSP 1 Score: 127.102 bits (318), Expect = 2.757e-27
Identity = 107/402 (26.62%), Postives = 175/402 (43.53%), Query Frame = 0
Query:  124 VLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNMHLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAML--LESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVK----RSNLDRLLAVRMSDPMERELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEH---VIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDST---RASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEV 513
            VL  +     I++CP L D+  +L+  +PE   +A + +M      +  +  + + +   ++  ++ R FP     M   GA  +  L  IF R    L+    +L+ ++++L +G    FR  L++ + +       L  L +   +W ++   T   DF   + L  +   +    K    R  L R++       ++   I      P  L  T+ G       L         +A +LP   R   L +++S+E HGRSL +LY  C   +  I LIE L  E+   V+G F  +P     A  G G  FLFR +  A  + W  D T    ++  R+ F +AT  + A+G + D  H GL++  DL TG S ++  F N PL G G   F I   EV
Sbjct:  327 VLSAVQQVLGIEYCPPLPDIATVLLTHMPEEYAFATIKDMINDTSHFLPVSQKDYYSWCHSYVFFVKRNFPDHYKLMTLCGALEDAALDPIFKRFFTTLLRPEDVLRFMDIFLVEGRKAVFRLALSILRLVSRDDMKRLQQLRTSDSFWDEIRKKTLHPDFSFNEQLKKMYPKFAKMAKRYPRRRALRRVIKFHEKTALDNVPIFVDQTPPKPLGFTSDGCS-----LAKPAIVRSNLAKWLPPSLRATKLDLIYSTELHGRSLASLYDKCGRYKNTITLIEVLTGENESTVVGMFATEPWTTNIAPFGDGECFLFRASPDAKCFKWTPDLTFDLESNTVREQFMVATNDYLAMGANTDGTH-GLMLGQDLITGESHRALGFENEPLQGIGQPVFCIGIFEV 722          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|698800080|ref|XP_009833069.1| (hypothetical protein H257_08731 [Aphanomyces astaci] >gi|574111788|gb|ETV77282.1| hypothetical protein H257_08731 [Aphanomyces astaci])

HSP 1 Score: 104.375 bits (259), Expect = 3.816e-20
Identity = 102/422 (24.17%), Postives = 170/422 (40.28%), Query Frame = 0
Query:  113 LTREQEAASRRVLCVLGYTCEIDFCPLLLDLVPLLMVFLPEAVVYAVVHNM----------HLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVL-THYGTHVKRSNLDRL---LAVRMSDPMER-ELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPC---IILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDV---FQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEV 513
            LT  Q      V  +  +   + +CP L+ L+PLL+    EA  +  V N+          H +R     +     LA    F++ +   +   A  +     D + +   +F+R  +       + ++L+ YL DG     R +LA+FK  +  +      +G  WW Q+        FD     T    + YG   K++NL  +   L  R S  ++  +         L L  + K + G +   H        + S+LP   + +  ++L+++E HGR LD LY  C         ++L+EEL    V+G F    +   ++  G    F F L      +  +  S      + V   + L  P   A G+S+ S    L +D DL  G S +S  F + PL G G  +F +  VEV
Sbjct:   90 LTPIQVQGFHHVCILFQHLGGVSYCPYLVHLIPLLLSQTSEAATFVAVSNLLKPHQQPGPHHAYRKLPTSVIADTTLARF--FKEILQWRYTEVATALTTCQGDDDSYFIHLFHRFFVGFFPMPVVYRVLDSYLADGPKVLCRVLLAVFKLTRHEM-VKCTATGEAWWAQLQAVVNGPSFDFDAMFTAAFRSWYGYLFKKANLQTMHKALEKRKSVRLQSAKHQHAHVHHHLPLLISPKSSGGRLLDPHRDAA----VTSWLPLGLQMKHFRLLYNAEVHGRGLDRLYSHCERGAASPEMLLLVEELTTGSVVGVFVSHQLGVHQSFFGDHRCFPFALVPTPHAFKQLVTSPAHHHAKPVLLKYMLCLPTMMAFGVSSTSSAAALELDEDLMRGKSDESDLFQSPPLVGGGVVEFDVGGVEV 504          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|1013940677|gb|KYQ94360.1| (RabGAP/TBC domain-containing protein [Dictyostelium lacteum])

HSP 1 Score: 104.76 bits (260), Expect = 4.609e-20
Identity = 106/448 (23.66%), Postives = 205/448 (45.76%), Query Frame = 0
Query:   92 PEWQDDLPLFGAA-APSFHDHPLTREQEAASRRVLCVLGYTC-EIDFCPLLLDLVPLLMVFLPEAVVYAVVHNM------HLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMA---AVGAD---TEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVLTHYGTHVKRSNLDRLLA---VRMSDPMERELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPCIILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAW------VGDSTRASEERDVFQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEVLVL 516
            P+   ++P FG   +PS  DH LT       + +L ++     EI++CPL+ D+V +LM+F+ E  VY +++ +        +R  Y    + Y  A +  F   +  + P    +M     +G+    +E+W    F R  +  +    +L++ ++YL +G    +R  LAL    K  L  M   S   + G + +    ++ D  Q    +   +G H+KR+ L+ + A   +++ D  E  + +    +P  L  +         I+ ++  Y ++I ++LPH       +++FS+  HG SL  +Y  C+   P ++ I+     +V G F  + + P+    G+   F+F L +P + Y +      + +ST  ++   ++         +G S   ++  + +D +L  G S  ++TFAN PL  + SE+F    +EV+  
Sbjct:  321 PKKIRNIPTFGGVLSPS--DHYLTESGIEQVKHILSLVALNFPEIEYCPLIPDIVHILMIFMSEPSVYKILNILIESSKNSFYR--YLNTNNTYCTAFILTFDTLIENHIPKLYKYMVNNLGIGSSKPFSEEW----FSRLFVSFIPFPTVLRIFDIYLNEGFKVIYRVGLALLMIHKRTL--MKCSSAEKFLGTLKNLNIQMN-DSDQ---LIKKAFGIHLKRNQLNSIDAKQNIKLHDHPEPSIPIYY--KPKVLTPS--------KIIEDESIY-EVIWNWLPHRLCICDPRIIFSTNTHGFSLSQVYEICKGHYPVMVFIKS--RTNVFGFFSGEELKPKDKYWGSSETFIFSL-KPNI-YVYKPILLDINNSTTDTKINSLYLQVGNDSLKVGSSEFGEN-AIYLDHELH-GKSNSTETFANPPL--NDSEQFESIVLEVIAF 735          
BLAST of EWM30302.1 vs. NCBI_GenBank
Match: gi|698800082|ref|XP_009833070.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574111789|gb|ETV77283.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 98.5969 bits (244), Expect = 2.731e-18
Identity = 97/397 (24.43%), Postives = 161/397 (40.55%), Query Frame = 0
Query:  138 PLLLDLVPLLMVFLPEAVVYAVVHNM----------HLHRPFYFGIGHRYFLAVMAAFRDYMHRYFPATAAHMAAVGADTEDWLGLIFYRCLIPLVGHRHLLQLLELYLEDGVCFFFRFMLALFKEIKWRLKAMLLESGAMWWGQVADFTFSIDFDVKQGLTTVL-THYGTHVKRSNLDRL---LAVRMSDPMER-ELIVKQDIEPLRLHGTTKGADGHVSILHNKRTYLKLIASFLPHHQRHRPLKMLFSSERHGRSLDTLYRACRNQQPC---IILIEELRHEHVIGAFCPDPIHPEKAVSGTGAAFLFRLTRPAVRYAWVGDSTRASEERDV---FQLATPHFFALGMSNDSDHPGLLIDADLDTGSSQQSKTFANLPLCGSGSEKFSIRRVEV 513
            P L+ L+PLL+    EA  +  V N+          H +R     +     LA    F++ +   +   A  +     D + +   +F+R  +       + ++L+ YL DG     R +LA+FK  +  +      +G  WW Q+        FD     T    + YG   K++NL  +   L  R S  ++  +         L L  + K + G +   H        + S+LP   + +  ++L+++E HGR LD LY  C         ++L+EEL    V+G F    +   ++  G    F F L      +  +  S      + V   + L  P   A G+S+ S    L +D DL  G S +S  F + PL G G  +F +  VEV
Sbjct:  110 PYLVHLIPLLLSQTSEAATFVAVSNLLKPHQQPGPHHAYRKLPTSVIADTTLARF--FKEILQWRYTEVATALTTCQGDDDSYFIHLFHRFFVGFFPMPVVYRVLDSYLADGPKVLCRVLLAVFKLTRHEM-VKCTATGEAWWAQLQAVVNGPSFDFDAMFTAAFRSWYGYLFKKANLQTMHKALEKRKSVRLQSAKHQHAHVHHHLPLLISPKSSGGRLLDPHRDAA----VTSWLPLGLQMKHFRLLYNAEVHGRGLDRLYSHCERGAASPEMLLLVEELTTGSVVGVFVSHQLGVHQSFFGDHRCFPFALVPTPHAFKQLVTSPAHHHAKPVLLKYMLCLPTMMAFGVSSTSSAAALELDEDLMRGKSDESDLFQSPPLVGGGVVEFDVGGVEV 499          
The following BLAST results are available for this feature:
BLAST of EWM30302.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112961|gb|EWM30302.1|0.000e+0100.00tld family protein [Nannochloropsis gaditana][more]
gi|299471332|emb|CBN79288.1|5.365e-3126.23conserved unknown protein [Ectocarpus siliculosus][more]
gi|813184492|ref|XP_012206418.1|1.182e-2827.89hypothetical protein SPRG_11998 [Saprolegnia paras... [more]
gi|224003115|ref|XP_002291229.1|4.632e-2829.74predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397563417|gb|EJK43791.1|7.465e-2826.65hypothetical protein THAOC_37732 [Thalassiosira oc... [more]
gi|669161880|ref|XP_008616502.1|2.551e-2726.26hypothetical protein SDRG_12217 [Saprolegnia dicli... [more]
gi|397643137|gb|EJK75675.1|2.757e-2726.62hypothetical protein THAOC_02595, partial [Thalass... [more]
gi|698800080|ref|XP_009833069.1|3.816e-2024.17hypothetical protein H257_08731 [Aphanomyces astac... [more]
gi|1013940677|gb|KYQ94360.1|4.609e-2023.66RabGAP/TBC domain-containing protein [Dictyosteliu... [more]
gi|698800082|ref|XP_009833070.1|2.731e-1824.43hypothetical protein, variant [Aphanomyces astaci]... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna387rna387Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications