EWM26799.1, cds3861 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|585108890|gb|EWM26799.1| (dynein light chain cytoplasmic [Nannochloropsis gaditana]) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 Query: 1 MGGEVLVLNGRTHKAASFLLNFGLSFFHARFQELALKKLLLIQTNPHAPLLRYIRRSLLAVKTCVLTTAERGHRPTSLLHPFSPAEAMAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSGYRLNYVRWNRFNVQKEGTAGHFAATGLRGDRSGKIVGLYLKCAHPGKKMEPRTVGVRTLLACYRKPRGVRGVHHVASEAVGIAPRFGFKKLTYDPRNK 274 MGGEVLVLNGRTHKAASFLLNFGLSFFHARFQELALKKLLLIQTNPHAPLLRYIRRSLLAVKTCVLTTAERGHRPTSLLHPFSPAEAMAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSGYRLNYVRWNRFNVQKEGTAGHFAATGLRGDRSGKIVGLYLKCAHPGKKMEPRTVGVRTLLACYRKPRGVRGVHHVASEAVGIAPRFGFKKLTYDPRNK Sbjct: 1 MGGEVLVLNGRTHKAASFLLNFGLSFFHARFQELALKKLLLIQTNPHAPLLRYIRRSLLAVKTCVLTTAERGHRPTSLLHPFSPAEAMAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSGYRLNYVRWNRFNVQKEGTAGHFAATGLRGDRSGKIVGLYLKCAHPGKKMEPRTVGVRTLLACYRKPRGVRGVHHVASEAVGIAPRFGFKKLTYDPRNK 274
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|530618359|ref|XP_005298897.1| (PREDICTED: dynein light chain 2, cytoplasmic isoform X1 [Chrysemys picta bellii]) HSP 1 Score: 191.43 bits (485), Expect = 4.751e-58 Identity = 89/133 (66.92%), Postives = 105/133 (78.95%), Query Frame = 0 Query: 44 TNPHAPLLRYIRRSLLAVKTCVLTTAERGHRPTSLLHPFSPAEAMAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 + P A + Y + + + T + + R R S+ P M++RKAVIKNADMSEDMQQDAVDCA+QA++++NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG Sbjct: 19 STPKAQVTPYQKSANASEATLTVRSVLREKRGASVQEAVWPRFTMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 151
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|1130259689|ref|XP_019769204.1| (PREDICTED: dynein light chain 1, cytoplasmic isoform X1 [Dendroctonus ponderosae] >gi|478251404|gb|ENN71870.1| hypothetical protein YQE_11485, partial [Dendroctonus ponderosae]) HSP 1 Score: 187.578 bits (475), Expect = 5.920e-57 Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0 Query: 66 LTTAERGHRPTSLLHPFSPAEAMAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 ++ ++ P L+ S E M +RKAVIKNADMSEDMQQDAVDCA+QA++++NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 17 ISAYKKTTHPQQTLNSPSKVEKMTDRKAVIKNADMSEDMQQDAVDCATQAIEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 127
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|546685535|gb|ERL95022.1| (hypothetical protein D910_12292 [Dendroctonus ponderosae]) HSP 1 Score: 187.578 bits (475), Expect = 6.056e-57 Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0 Query: 66 LTTAERGHRPTSLLHPFSPAEAMAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 ++ ++ P L+ S E M +RKAVIKNADMSEDMQQDAVDCA+QA++++NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 15 ISAYKKTTHPQQTLNSPSKVEKMTDRKAVIKNADMSEDMQQDAVDCATQAIEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 125
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|410923012|ref|XP_003974976.1| (PREDICTED: dynein light chain LC6, flagellar outer arm [Takifugu rubripes] >gi|410923018|ref|XP_003974979.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Takifugu rubripes]) HSP 1 Score: 186.037 bits (471), Expect = 8.355e-57 Identity = 83/89 (93.26%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 88 MAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 M+ERKAVIKNADMSEDMQQDAV+CA+QAL++FNIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG Sbjct: 1 MSERKAVIKNADMSEDMQQDAVECATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|675879313|ref|XP_009025211.1| (hypothetical protein HELRODRAFT_68300 [Helobdella robusta] >gi|555693376|gb|ESN96608.1| hypothetical protein HELRODRAFT_68300 [Helobdella robusta]) HSP 1 Score: 186.037 bits (471), Expect = 9.838e-57 Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 88 MAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 M++RKAVIKNADMSEDMQQDAVDCA+QAL+++NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|646714599|gb|KDR18512.1| (Dynein light chain 1, cytoplasmic [Zootermopsis nevadensis]) HSP 1 Score: 185.652 bits (470), Expect = 1.264e-56 Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 88 MAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 M+ERKAVIKNADMSEDMQQDAVDCA+QAL+++NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|1040305915|gb|OBS83654.1| (hypothetical protein A6R68_22369, partial [Neotoma lepida]) HSP 1 Score: 185.652 bits (470), Expect = 1.301e-56 Identity = 81/89 (91.01%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 88 MAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 M++RKAVIKNADMSEDMQQDAVDCA+QA++++NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG Sbjct: 3 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|1191040571|ref|XP_020897666.1| (dynein light chain 2, cytoplasmic [Exaiptasia pallida] >gi|999976821|gb|KXJ15995.1| Dynein light chain 2, cytoplasmic [Exaiptasia pallida]) HSP 1 Score: 185.652 bits (470), Expect = 1.306e-56 Identity = 83/89 (93.26%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 88 MAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 M+ERKAVIKNADMSEDMQQDAV+CA+QA+++FNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG Sbjct: 1 MSERKAVIKNADMSEDMQQDAVECATQAMEKFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
BLAST of EWM26799.1 vs. NCBI_GenBank
Match: gi|374093227|ref|NP_001243365.1| (dynein light chain [Aplysia californica] >gi|871226224|ref|XP_012936771.1| PREDICTED: dynein light chain isoform X1 [Aplysia californica] >gi|908483543|ref|XP_013092808.1| PREDICTED: dynein light chain 2, cytoplasmic [Biomphalaria glabrata] >gi|322812855|gb|ADX20590.1| dynein light chain [Aplysia californica]) HSP 1 Score: 185.267 bits (469), Expect = 1.571e-56 Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 88 MAERKAVIKNADMSEDMQQDAVDCASQALDQFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 176 M+ERKAVIKNADMSEDMQQDAVDCA+QAL+++NIEKDIAA++KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG Sbjct: 1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89 The following BLAST results are available for this feature:
BLAST of EWM26799.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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