EWM26796.1, cds3840 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|585108887|gb|EWM26796.1| (hypothetical protein Naga_100018g60 [Nannochloropsis gaditana]) HSP 1 Score: 758.829 bits (1958), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MHILHPHRAEKRRLCLSGYIFMTSTVGHDPNAFHQLPGDYASENKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVLERASVKSSAAAFSVGY 369 MHILHPHRAEKRRLCLSGYIFMTSTVGHDPNAFHQLPGDYASENKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVLERASVKSSAAAFSVGY Sbjct: 1 MHILHPHRAEKRRLCLSGYIFMTSTVGHDPNAFHQLPGDYASENKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVLERASVKSSAAAFSVGY 369
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|553189691|ref|XP_005855052.1| (hypothetical protein NGA_2012310, partial [Nannochloropsis gaditana CCMP526] >gi|422294005|gb|EKU21305.1| hypothetical protein NGA_2012310, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0 Identity = 335/339 (98.82%), Postives = 338/339 (99.71%), Query Frame = 0 Query: 20 IFMTSTVGHDPNAFHQLPGDYASENKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVLERASV 358 IFMTSTVGHDPNAFHQLPGDYASENKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGP QANDQHQHVHGTGCCSLTVDYPALSDLRE+QGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWL+ELEDGDDGGFQE+RRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVLERASV Sbjct: 1 IFMTSTVGHDPNAFHQLPGDYASENKHDENGTEVSVVERVKEEYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPEQANDQHQHVHGTGCCSLTVDYPALSDLREKQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLRELEDGDDGGFQEIRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVLERASV 339
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|224005797|ref|XP_002291859.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972378|gb|EED90710.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 91.6633 bits (226), Expect = 9.736e-17 Identity = 96/328 (29.27%), Postives = 136/328 (41.46%), Query Frame = 0 Query: 64 LHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGP----GQANDQHQH-----VHG----TGC-CSLTVD-----YPALSDLRERQGGGSRAMEVGMPV------GSGDGDEQALLRQAEREQNGDEEEEESDDEWLQE-LEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCP---------LVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLV---DSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVL 353 L CCQ+E+E+ R R+ L T L D A ++RR P G N + + +HG +GC C + Y L+D + +G G+GD Q + +G + + D L E + + Q RRAE+ A ++ G G+H + P R S V+H YD YSP+S +LDL LE +A+RYPGT+FLR + +G GG K + L +V+A+KEGR+V DF GD RV AVEQWL+H VL Sbjct: 27 LDSCCQREIESNRKRSALETTLRKHDRVAKAEDQRRQQQQPSLLVGSNNGGYNYKAFNLIHGLSFGSGCRCCYDPNGDGGEYELLADAKRERGDDQLNNNNNNSSSNSGGEGTGDATNQQRNGTTNEQTDGSDSGDSEFDYLLDEDIPSSSEYDMQAQRRAELESMAHHYEVIRFHGYGVHRQMHPKRVFASAGYGSSTDRDRVTVKGSVVHLYDAYSPLSVSLDLCLEDMASRYPGTKFLRGLGVTSLLFAEGDGGD-QKWKKGDL-------------PMVVALKEGRVVAFSSGLRDFYNAGGDQHNERVEPRAVEQWLEHAGVL 340
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|224005799|ref|XP_002291860.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972379|gb|EED90711.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 72.7886 bits (177), Expect = 1.509e-10 Identity = 73/235 (31.06%), Postives = 107/235 (45.53%), Query Frame = 0 Query: 153 DGDEQALLRQAEREQNGDEEEE----------------ESDDEWL----QELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALK-----------IVQRASCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKS---VVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVL 353 DG E LL +A+RE E E +SDDE+ +++ + + Q RRAE+ +A + L+ G G+H + P+R L +V R + V+H YD YSP+S +LDL LE +A+RYPGT+F+R G G L L V + ++ ++LA+KEG +V R F + G+V AVEQWL VL Sbjct: 91 DGREYELLAEAKREMQMTVEGESEAIIHLGYEMKDAGSDSDDEFDYLLDEDISNSSEIDMQAQRRAELEAKAEQYQILRQYGYGVHRQIHPSRVLASAGFGGSCEDGVVPRGA---VVHLYDAYSPLSVSLDLCLEGMASRYPGTKFVR--------------GLGKASL---LSVNDDDTSHRWKNGHLPMLLALKEGAVVSFSSGL-RDFNNA--GQVESGAVEQWLGIAGVL 302
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|397634056|gb|EJK71258.1| (hypothetical protein THAOC_07321, partial [Thalassiosira oceanica]) HSP 1 Score: 70.8626 bits (172), Expect = 8.242e-10 Identity = 88/323 (27.24%), Postives = 127/323 (39.32%), Query Frame = 0 Query: 64 LHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESD------------------------DEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIV------QRASC---PLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVL 353 L CCQ+E+E+ R + + L D A + RR H S +Y + +R G G R + DG E LL +A RE+ +E S+ D L E G + RRAE+ A G G+H + P RAL V +R + +H +D YSP+SA+LDL LE LA+++PGT+F+R+ G + E PA G+ V+LA++EGR+V + G R + V AVE WL+ VL Sbjct: 86 LDSCCQREIESNRKQNAVEAALRVHDRVAKAEDSRR---------------HQQTLSSNWREYNPANLVRGEFGDGCRCCYDP----NEDGGEYELLAEARRERTNARPDEPSELDGDGESKDPVGSASDSDSSDDEFDYLLDEDLPGAHSEYDNSRRAELESLAKRVEVANYHGYGVHRQLHPKRALSAVGYGFDQKRETFRPRGAALHLFDAYSPLSASLDLCLEDLASKHPGTKFVRSI------------GVSTLTYAEGSDSPADWRRGDL--PVLLALREGRVV--AWSSGLRDFECGRSEVDTRAVELWLESAGVL 373
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|219118444|ref|XP_002179994.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408251|gb|EEC48185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 66.2402 bits (160), Expect = 1.869e-8 Identity = 86/309 (27.83%), Postives = 131/309 (42.39%), Query Frame = 0 Query: 64 LHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCC----SLTVDYPALSDLR-ERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRA-LEQAELQ-----ALGVGLHTYVAPARALKIVQRA------SCPLVMHCYDPYSPISAALDLELEVLAAR-YPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPA-PAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVL 353 L CCQ+E E+ R L L D+ RRR + + G CC S +Y AL +LR R+ A E E + + +++ D + SDDE+ L++ G +E++ E +RRA LE + + G G H + P R LK A S +V+H DP S SA+LDL LE LA + GT+FLR+ GG+ + ++ L P E ++A+++G + C + D ++G+V AV +WL C VL Sbjct: 29 LDECCQREEESNRKGNALRRTLQRYDVVAEKERRRRQLVN-------TTNFSGCRCCYDPNSDGGEYLALIELRTSRKQKEEDAEET----------EHQAMEEKKKDDTVDVASDPSDDEFDYLLDEELPGQGEELKALEDLRRAELEMSIFSREVALSHGYGTHRQMHPTRVLKAAGLAPGTRDPSPAVVLHLVDPDSIASASLDLYLEELAQKEAKGTKFLRS------------GGRSTLLMDAELATKVLPRLKPEKDMPAMVAIRDGVATNVCPRL-QGLTD-RDGQVVTRAVFEWLDRCGVL 306
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|1210529495|dbj|GAX11837.1| (hypothetical protein FisN_20Lh106 [Fistulifera solaris]) HSP 1 Score: 65.4698 bits (158), Expect = 3.398e-8 Identity = 84/291 (28.87%), Postives = 116/291 (39.86%), Query Frame = 0 Query: 64 LHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLRERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRASCPLVMHCYDPYSPISAALDLELE-VLAARYPGTRFLRTAFGANGGTRDGRGGQGSKVLRESLRVPAPAPTGEYRKSVVLAVKEGRLVDSCYDFGRRFGDVKEGRVYGEAVEQWLQHCRVL 353 L CCQ+E+E R LM L+ D+ +RRN+ P CC Q GG + + DE E ++ EEEE+ D L++ E +D E RRAE+ L+ + G G + P+R L + RA V+H +D SP SA+LDL E LA + GT FLR+ DGR S +L P + ++A+K G ++ F D G V G AVE WL C VL Sbjct: 28 LESCCQREIETNRKGNALMATLSKHDVVAARERQRRNLITPEDCR----------CC-----------FDPNQDGGEYWALIQLKQQLRKVDEIENDEIEEIKKEDGEEEEDEFDYLLEDSELPED----EFRRAELEWNMLQTEIRRFHGYGSVRQMHPSRVLGVALRAPV-CVLHLFDTDSPASASLDLYFERTLAPKTMGTLFLRS---------DGR----STLLLNPKHFSDIDP--HHNLPALIALKNGAIIQQNLQFQGLIDDT--GAVIGTAVETWLDRCSVL 275
BLAST of EWM26796.1 vs. NCBI_GenBank
Match: gi|299115794|emb|CBN74357.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 61.6178 bits (148), Expect = 6.416e-7 Identity = 77/256 (30.08%), Postives = 110/256 (42.97%), Query Frame = 0 Query: 34 HQLPGDYASENKHDENGTEVSVVERVKE--EYLHPCCQKELEATRARTKLMTKLTAADITRHAMERRRNVFGPGQANDQHQHVHGTGCCSLTVDYPALSDLR----------ERQGGGSRAMEVGMPVGSGDGDEQALLRQAEREQNGDEEEEESDDEWLQELEDGDDGGFQEVRRAEMVRRALEQAELQALGVGLHTYVAPARALKIVQRA---SCPLVMHCYDPYSPISAALDLELEVLAARYPGTRFLRTAFG 274 H GD + H +G +V E E E HPCCQK+ EA KL + L D+++ A R+ F G A G DYPAL + R R G +R G GDG + + + + D+++++ DD+ L+D + ++R M A L+ALG GLH V P ++ R +V+H YD S + A+LDL LE A Y GTRF+R G Sbjct: 6 HSHCGDSTCNHDHGTSG-QVDGEEDFHEFLEETHPCCQKDSEAKARALKLRSALDKVDLSQIAERARKAAFSSGLAGPPASRSGGG-------DYPALREARAAAAAAAAKDSRNDGAARG------AGYGDGIVEGHNNHSRVDSDDDDDDDDDDDDLDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHIEV-PESGVEEASRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLG 246 The following BLAST results are available for this feature:
BLAST of EWM26796.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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