EWM26793.1, cds3836 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|585108884|gb|EWM26793.1| (ribose-5-phosphate isomerase [Nannochloropsis gaditana]) HSP 1 Score: 431.024 bits (1107), Expect = 1.094e-152 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query: 1 MAPFVPASSFPSLLAVDPTASTFPQEPNESLLLMLLIDHLTYPPPIFPLVPSMSNSCSPVERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 213
MAPFVPASSFPSLLAVDPTASTFPQEPNESLLLMLLIDHLTYPPPIFPLVPSMSNSCSPVERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK
Sbjct: 1 MAPFVPASSFPSLLAVDPTASTFPQEPNESLLLMLLIDHLTYPPPIFPLVPSMSNSCSPVERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 213
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|585108883|gb|EWM26792.1| (ribose-5-phosphate isomerase [Nannochloropsis gaditana]) HSP 1 Score: 317.005 bits (811), Expect = 2.617e-107 Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0
Query: 54 SNSCSPVERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 213
S + VERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK
Sbjct: 77 STAAFAVERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 236
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|553183958|ref|XP_005854001.1| (ribose 5-phosphate isomerase A [Nannochloropsis gaditana CCMP526] >gi|422295057|gb|EKU22356.1| ribose 5-phosphate isomerase A [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 297.745 bits (761), Expect = 4.256e-99 Identity = 151/166 (90.96%), Postives = 153/166 (92.17%), Query Frame = 0
Query: 48 PLVPSMSNSCSPVERLGMKLKADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 213
PLV S+S V G + DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK
Sbjct: 117 PLVTLDSHSVLDVAIDGAD-EVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 281
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|299470524|emb|CBN78515.1| (Ribose-5-phosphate isomerase [Ectocarpus siliculosus]) HSP 1 Score: 203.756 bits (517), Expect = 1.211e-62 Identity = 100/145 (68.97%), Postives = 112/145 (77.24%), Query Frame = 0
Query: 68 KADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINK 212
+ DP LNLVKGRGGALLREKMVEVCAKKFIVIVDDSK VPGLG++GAMPVE+TPFC EHT T+ LP +KG KLR + KPYVTDNDNYIVDLY+TDPI D + + VGVVEHG FLDM+ AVI AG +GI V K
Sbjct: 91 EVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKG-CDAKLREEDGKPYVTDNDNYIVDLYFTDPIKDANQAGKEMLETVGVVEHGLFLDMSFAVISAGTDGITVKTK 234
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|1189379739|gb|OSX68429.1| (hypothetical protein BU14_2821s0001 [Porphyra umbilicalis]) HSP 1 Score: 191.43 bits (485), Expect = 4.644e-57 Identity = 94/144 (65.28%), Postives = 113/144 (78.47%), Query Frame = 0
Query: 68 KADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVIN 211
+ D LNLVKGRGGALLREKMVEV AKKF+VIVDD+K+VPGLG++GAMPVE+TPFC + T +LEL + G T K+R DG KPYVTDNDNYIVDLY+T+PIAD + +VGVVEHG FL MT+ VIVAG +G++VI
Sbjct: 146 EVDGDLNLVKGRGGALLREKMVEVSAKKFVVIVDDTKLVPGLGISGAMPVEVTPFCVDFTVARLLELGSIAG-CTAKVRDDGGKPYVTDNDNYIVDLYFTEPIADAVKAGEEINALVGVVEHGLFLGMTSEVIVAGADGVKVIK 288
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|544215034|ref|XP_005537663.1| (ribose 5-phosphate isomerase [Cyanidioschyzon merolae strain 10D] >gi|449018225|dbj|BAM81627.1| ribose 5-phosphate isomerase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 191.43 bits (485), Expect = 5.757e-57 Identity = 92/138 (66.67%), Postives = 104/138 (75.36%), Query Frame = 0
Query: 70 DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGI 207
D ALNLVKGRGGALLREKMVEVCAK+FIVIVD+SK+VPGLGV+GAMPVE+TPFC +HT R I LP + G R YVTDN NYIVDLY+ PIAD A+AL VGVVEHG FLDM + VIVAG +G+
Sbjct: 161 DSALNLVKGRGGALLREKMVEVCAKQFIVIVDESKLVPGLGVSGAMPVEVTPFCWQHTMRKIAALPALAGCRAEARRDAAGALYVTDNGNYIVDLYFEKPIADAYQAAQALRDTVGVVEHGLFLDMASVVIVAGAQGV 298
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|1026764362|gb|OAE25204.1| (hypothetical protein AXG93_855s1030 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 181.03 bits (458), Expect = 6.612e-53 Identity = 86/144 (59.72%), Postives = 108/144 (75.00%), Query Frame = 0
Query: 70 DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTG-AMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINK 212
DP LNLVKGRGGALLREKMVE + KF+VIVD++K+V GLG +G AMPVE+ FC ++ + LP V G +LRMDGDKPYVTDN NYI+DLY+ DPI D A A+A+ + GVV+HG FL+M TAVI+AG +G+ V +K
Sbjct: 162 DPDLNLVKGRGGALLREKMVEAASAKFVVIVDETKLVDGLGGSGLAMPVEVVQFCWKYNAERLKNLPEVAGCEV-QLRMDGDKPYVTDNSNYIIDLYFKDPIKDANAAAKAISSLEGVVDHGLFLNMATAVIIAGSDGVSVKSK 304
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|546314819|ref|XP_005715683.1| (Ribose-5-phosphate isomerase, partial [Chondrus crispus] >gi|507112172|emb|CDF35864.1| Ribose-5-phosphate isomerase, partial [Chondrus crispus]) HSP 1 Score: 178.333 bits (451), Expect = 1.121e-52 Identity = 91/144 (63.19%), Postives = 110/144 (76.39%), Query Frame = 0
Query: 68 KADPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMD--GDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEV 209
+ DP LNLVKGRGGALLREKMVEV AKKFIVIVD+SK+V GLG++GAMPVE+TPF + + ++EL VKG T KLRMD G PYVTDN NYIVDLY+ PI D + + +VGVVEHG FL M++AVI+AGK+G+ V
Sbjct: 86 EVDPHLNLVKGRGGALLREKMVEVQAKKFIVIVDESKLVDGLGISGAMPVEVTPFSSQFNLKRLVELDSVKG-CTAKLRMDDAGTSPYVTDNHNYIVDLYFDKPIRDPVQAGKDFDSLVGVVEHGLFLGMSSAVIIAGKDGVYV 228
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|407369313|emb|CBX25073.1| (ribose-5-phosphate isomerase [Polytomella sp. Pringsheim 198.80]) HSP 1 Score: 177.948 bits (450), Expect = 1.639e-52 Identity = 89/145 (61.38%), Postives = 109/145 (75.17%), Query Frame = 0
Query: 70 DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTG-AMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 213
DP L++VKGRGGALLREKMVE +K F+ IVDDSK+V GLG + AMP+EI FCH++T R I LP V G T KLRM+GDKPYVTDN NYI+DLY+ P+AD KA + A+ + GVV+HG FLDM I+AGKEG+EV +K
Sbjct: 96 DPNLDVVKGRGGALLREKMVEKASKLFVCIVDDSKLVDGLGGSKLAMPIEIVQFCHQYTIRRIAALPQVAGC-THKLRMEGDKPYVTDNGNYIIDLYFETPMADSKAASEAILALEGVVDHGLFLDMVGVCIIAGKEGVEVRTRK 239
BLAST of EWM26793.1 vs. NCBI_GenBank
Match: gi|971507917|dbj|GAQ90284.1| (ribose 5-phosphate isomerase A [Klebsormidium nitens]) HSP 1 Score: 179.874 bits (455), Expect = 2.843e-52 Identity = 90/144 (62.50%), Postives = 108/144 (75.00%), Query Frame = 0
Query: 70 DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTG-AMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINK 212
DP LNLVKGRGGALLREKMVE +KKF+VIVD++K+V GLG + AMPVEI FC ++ + + LP VKG T KLRM+GDKPYVTDN NYIVDLY+ +PI D A + A+ + GVV+HG FLDM T VI+AG GIEV K
Sbjct: 175 DPDLNLVKGRGGALLREKMVEKASKKFVVIVDETKLVDGLGGSKLAMPVEIVQFCWKYNLQRLENLPEVKGC-TAKLRMEGDKPYVTDNSNYIVDLYFEEPIKDAHAASEAILALEGVVDHGLFLDMATVVIIAGSNGIEVREK 317 The following BLAST results are available for this feature:
BLAST of EWM26793.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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