EWM26846.1, cds3829 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|585108940|gb|EWM26846.1| (grip and coiled-coil domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1971.05 bits (5105), Expect = 0.000e+0 Identity = 975/975 (100.00%), Postives = 975/975 (100.00%), Query Frame = 0 Query: 1 MEAQGTGPSSPTRVTTRPIKDPADDPLSASTPGLTHDNSTSTSEDSGGREHKPKSTSTAGMAAATAASLFRGLHGGNGLKNNSHGTNLTTSPLRNKGIEALSSFSKGILKISQHHQYASSLGKTSTSTAPDSPCQDEQRVIGPDISMEDLMLACTKLKRRVKVMETQTRELKEANGRTEVERDEMIDFLYRDVLQREDVPPHGTQASLPALRREWAQQEEERHLTLQAMQQQHREYVLANKAAPASTLAIALPSIPKPQEEHDESSLATVREQNVDDNELCRVQNELEDAKRALAQTEEELQALRRQVAEQNKTAAEERDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPRDRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMVLEMKRLRESVEEGEMARARLSREVESRQQACVKLEKALMETKEILRKEKEAWESGAQAQRDESRQQAASQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSPLRVGRVEVVGGGKSGSDGKEECGKRDGGTMTKPQSAAGAVARVGFEQGFGSLSGSGGGKSVEGSVGSLSLSQSDFQSLSEHADTGREGGRGRSSASFLGEPRYSTSSAGGLTTRSSGTESEDEEGGRPKRGPVLSF 975 MEAQGTGPSSPTRVTTRPIKDPADDPLSASTPGLTHDNSTSTSEDSGGREHKPKSTSTAGMAAATAASLFRGLHGGNGLKNNSHGTNLTTSPLRNKGIEALSSFSKGILKISQHHQYASSLGKTSTSTAPDSPCQDEQRVIGPDISMEDLMLACTKLKRRVKVMETQTRELKEANGRTEVERDEMIDFLYRDVLQREDVPPHGTQASLPALRREWAQQEEERHLTLQAMQQQHREYVLANKAAPASTLAIALPSIPKPQEEHDESSLATVREQNVDDNELCRVQNELEDAKRALAQTEEELQALRRQVAEQNKTAAEERDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPRDRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMVLEMKRLRESVEEGEMARARLSREVESRQQACVKLEKALMETKEILRKEKEAWESGAQAQRDESRQQAASQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSPLRVGRVEVVGGGKSGSDGKEECGKRDGGTMTKPQSAAGAVARVGFEQGFGSLSGSGGGKSVEGSVGSLSLSQSDFQSLSEHADTGREGGRGRSSASFLGEPRYSTSSAGGLTTRSSGTESEDEEGGRPKRGPVLSF Sbjct: 1 MEAQGTGPSSPTRVTTRPIKDPADDPLSASTPGLTHDNSTSTSEDSGGREHKPKSTSTAGMAAATAASLFRGLHGGNGLKNNSHGTNLTTSPLRNKGIEALSSFSKGILKISQHHQYASSLGKTSTSTAPDSPCQDEQRVIGPDISMEDLMLACTKLKRRVKVMETQTRELKEANGRTEVERDEMIDFLYRDVLQREDVPPHGTQASLPALRREWAQQEEERHLTLQAMQQQHREYVLANKAAPASTLAIALPSIPKPQEEHDESSLATVREQNVDDNELCRVQNELEDAKRALAQTEEELQALRRQVAEQNKTAAEERDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPRDRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMVLEMKRLRESVEEGEMARARLSREVESRQQACVKLEKALMETKEILRKEKEAWESGAQAQRDESRQQAASQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSPLRVGRVEVVGGGKSGSDGKEECGKRDGGTMTKPQSAAGAVARVGFEQGFGSLSGSGGGKSVEGSVGSLSLSQSDFQSLSEHADTGREGGRGRSSASFLGEPRYSTSSAGGLTTRSSGTESEDEEGGRPKRGPVLSF 975
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|553186373|ref|XP_005854406.1| (hypothetical protein NGA_2024300, partial [Nannochloropsis gaditana CCMP526] >gi|422294653|gb|EKU21953.1| hypothetical protein NGA_2024300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0 Query: 255 IPKPQEEHDESSLATVREQNVDDNELCRVQNELEDAKRALAQTEEELQALRRQVAEQNKTAAEERDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPRDRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMVLEMKRLRESVEEGEMARARLSREVESRQQACVKLEKALMETKEILRKEKEAWESGAQAQRDESRQQAASQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGS 646 IPKPQEEHDESSLATVREQNVDDNELCRVQNELEDAKRALAQTEEELQALRRQVAEQNKTAAEERDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPRDRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMVLEMKRLRESVEEGEMARARLSREVESRQQACVKLEKALMETKEILRKEKEAWESGAQAQRDESRQQAASQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGS Sbjct: 1 IPKPQEEHDESSLATVREQNVDDNELCRVQNELEDAKRALAQTEEELQALRRQVAEQNKTAAEERDTARKLKLEVGKMQESHAKEVTRLRRQIRPQGEDGAPQAGPETPASEAGREGKTGAERERAEKTASFPRDRAMDEADELEKELAASSLILQEKDSAIDALHRAMSQDQSERLTLESSLRAAQSKVDSLTQEIASISGLLRGAEQEKENLRQRDAEQRAELDRGCQQLAEKTGVLLRVRSDLEKTEQSCALKTAQMAQLETGVQEMVLEMKRLRESVEEGEMARARLSREVESRQQACVKLEKALMETKEILRKEKEAWESGAQAQRDESRQQAASQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGS 392
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|553186377|ref|XP_005854407.1| (grip and coiled-coil domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526] >gi|422294654|gb|EKU21954.1| grip and coiled-coil domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 263.462 bits (672), Expect = 2.337e-79 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 Query: 643 ASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGG 771 ASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGG Sbjct: 1 ASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGG 129
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|813111646|ref|XP_012195222.1| (hypothetical protein SPRG_19023 [Saprolegnia parasitica CBS 223.65] >gi|641540391|gb|KDO34173.1| hypothetical protein SPRG_19023 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 110.153 bits (274), Expect = 5.782e-21 Identity = 66/181 (36.46%), Postives = 102/181 (56.35%), Query Frame = 0 Query: 609 ESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAP 789 +++ KS LAR+++ +K+ Q+ ++ LE ++ SG R+I ELA VQ+QRD+ R S + +L A+A K E+ L A + E L R ++REG N+EYLKNVVV ++SF PG+ S++A L VL+TLL FSP D + E R + ++P+K + P Sbjct: 543 DARAKSKLARQLVLEKEEQVASLSAQLTQLEHDVKSGDADHRRIFELANVQAQRDAVQR----SRDFEVAELTNAVAAKQAEIESLKAQIKVMEDEIAVLVRTERREGVNMEYLKNVVVQFMSFRPGS-SQQAKLIPVLSTLLQFSPHD---VDEVRAATKRSTAWTSWGVEKKPIKTLVP 715
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|669152992|ref|XP_008612058.1| (hypothetical protein SDRG_07972 [Saprolegnia diclina VS20] >gi|530736410|gb|EQC34652.1| hypothetical protein SDRG_07972 [Saprolegnia diclina VS20]) HSP 1 Score: 107.457 bits (267), Expect = 4.256e-20 Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 0 Query: 609 ESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKI 761 +++ KS LAR+++ +K+ Q+ ++ LE ++ SG R+I ELA VQ+QRD+ R S + +L A+ATK EV L + E L R ++REG N+EYLKNVVV ++SF PG+ S++A L VL+TLL FSP D ++ Sbjct: 558 DARAKSKLARQLVLEKEEQVASLSAQLAQLEHDVKSGDADHRRIFELANVQAQRDAMQR----SRDSEVAELSNAVATKQAEVESLKGQIKIMEDEIAVLVRTERREGVNMEYLKNVVVQFMSFRPGS-SQQAKLIPVLSTLLQFSPHDMDEV 705
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|570944866|gb|ETP10123.1| (hypothetical protein F441_14164 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 107.842 bits (268), Expect = 4.894e-20 Identity = 79/246 (32.11%), Postives = 126/246 (51.22%), Query Frame = 0 Query: 594 SQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSP 839 +++QTF+ EL ES+ KS LA + + +K++++ ++ LEE++ SG +RKI+E A +Q++R+ R + + ++L+EA E+ L + +E A+ + Q+R+G N+EYLKNVVV Y+SF PG+ S++ L VL+TLL F+ D K+I G W + K I GA NH H V ++ + GGR PLG G+ SP Sbjct: 964 NEKQTFKRELDRLETESKHKSKLALQAVLEKEKEIARLSARLHELEEDVRSGGADNRKILEFAQLQAKREVEQREQAAQMQTLSQQLEEA----QREIQELREDKRRHAEELTAMLQNQRRDGVNMEYLKNVVVQYMSFRPGS-SQQTRLVPVLSTLLQFTAADIKEIKHAARRG-NSWTSWGSSDSGLDYKPIVVGA-----------NHRHPVPSSSSSTSQDNGGRRSPLGRTGSAPVARVSP 1192
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|568022901|gb|ETL96965.1| (hypothetical protein L917_05694 [Phytophthora parasitica]) HSP 1 Score: 107.842 bits (268), Expect = 4.894e-20 Identity = 79/246 (32.11%), Postives = 126/246 (51.22%), Query Frame = 0 Query: 594 SQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSP 839 +++QTF+ EL ES+ KS LA + + +K++++ ++ LEE++ SG +RKI+E A +Q++R+ R + + ++L+EA E+ L + +E A+ + Q+R+G N+EYLKNVVV Y+SF PG+ S++ L VL+TLL F+ D K+I G W + K I GA NH H V ++ + GGR PLG G+ SP Sbjct: 964 NEKQTFKRELDRLETESKHKSKLALQAVLEKEKEIARLSARLHELEEDVRSGGADNRKILEFAQLQAKREVEQREQAAQMQTLSQQLEEA----QREIQELREDKRRHAEELTAMLQNQRRDGVNMEYLKNVVVQYMSFRPGS-SQQTRLVPVLSTLLQFTAADIKEIKHAARRG-NSWTSWGSSDSGLDYKPIVVGA-----------NHRHPVPSSSSSTSQDNGGRRSPLGRTGSAPVARVSP 1192
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|568042991|gb|ETM40299.1| (hypothetical protein L914_13720, partial [Phytophthora parasitica]) HSP 1 Score: 107.842 bits (268), Expect = 4.962e-20 Identity = 79/246 (32.11%), Postives = 126/246 (51.22%), Query Frame = 0 Query: 594 SQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSP 839 +++QTF+ EL ES+ KS LA + + +K++++ ++ LEE++ SG +RKI+E A +Q++R+ R + + ++L+EA E+ L + +E A+ + Q+R+G N+EYLKNVVV Y+SF PG+ S++ L VL+TLL F+ D K+I G W + K I GA NH H V ++ + GGR PLG G+ SP Sbjct: 975 NEKQTFKRELDRLETESKHKSKLALQAVLEKEKEIARLSARLHELEEDVRSGGADNRKILEFAQLQAKREVEQREQAAQMQTLSQQLEEA----QREIQELREDKRRHAEELTAMLQNQRRDGVNMEYLKNVVVQYMSFRPGS-SQQTRLVPVLSTLLQFTAADIKEIKHAARRG-NSWTSWGSSDSGLDYKPIVVGA-----------NHRHPVPSSSSSTSQDNGGRRSPLGRTGSAPVARVSP 1203
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|570976387|gb|ETP38209.1| (hypothetical protein F442_14110 [Phytophthora parasitica P10297]) HSP 1 Score: 107.842 bits (268), Expect = 5.064e-20 Identity = 79/246 (32.11%), Postives = 126/246 (51.22%), Query Frame = 0 Query: 594 SQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSP 839 +++QTF+ EL ES+ KS LA + + +K++++ ++ LEE++ SG +RKI+E A +Q++R+ R + + ++L+EA E+ L + +E A+ + Q+R+G N+EYLKNVVV Y+SF PG+ S++ L VL+TLL F+ D K+I G W + K I GA NH H V ++ + GGR PLG G+ SP Sbjct: 964 NEKQTFKRELDRLETESKHKSKLALQAVLEKEKEIARLSARLHELEEDVRSGGADNRKILEFAQLQAKREVEQREQAAQMQTLSQQLEEA----QREIQELREDKRRHAEELTAMLQNQRRDGVNMEYLKNVVVQYMSFRPGS-SQQTRLVPVLSTLLQFTAADIKEIKHAARRG-NSWTSWGSSDSGLDYKPIVVGA-----------NHRHPVPSSSSSTSQDNGGRRSPLGRTGSAPVARVSP 1192
BLAST of EWM26846.1 vs. NCBI_GenBank
Match: gi|570321055|gb|ETO69003.1| (hypothetical protein F444_14284 [Phytophthora parasitica P1976]) HSP 1 Score: 107.842 bits (268), Expect = 5.064e-20 Identity = 79/246 (32.11%), Postives = 126/246 (51.22%), Query Frame = 0 Query: 594 SQQQTFEEELMLYHKESQKKSALAREIIADKDRQLGECVQKIMALEEEIASGSYTDRKIMELATVQSQRDSHHRAELESCKVSLKKLQEALATKDLEVGRLTALQATLNQERVALRRAQQREGCNLEYLKNVVVDYLSFPPGALSEKASLERVLATLLAFSPQDRKKIAEGREGGQGGGIGWLLTAPRRPVKHIAPGAHAVSVSLVDSRNHDHGVEAAKNKAGVHVGGRGGPLGDKGNGQSKLPSP 839 +++QTF+ EL ES+ KS LA + + +K++++ ++ LEE++ SG +RKI+E A +Q++R+ R + + ++L+EA E+ L + +E A+ + Q+R+G N+EYLKNVVV Y+SF PG+ S++ L VL+TLL F+ D K+I G W + K I GA NH H V ++ + GGR PLG G+ SP Sbjct: 964 NEKQTFKRELDRLETESKHKSKLALQAVLEKEKEIARLSARLHELEEDVRSGGADNRKILEFAQLQAKREVEQREQAAQMQTLSQQLEEA----QREIQELREDKRRHAEELTAMLQNQRRDGVNMEYLKNVVVQYMSFRPGS-SQQTRLVPVLSTLLQFTAADIKEIKHAARRG-NSWTSWGSSDSGLDYKPIVVGA-----------NHRHPVPSSSSSTSQDNGGRRSPLGRTGSAPVARVSP 1192 The following BLAST results are available for this feature:
BLAST of EWM26846.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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