EWM26868.1, cds3821 (CDS) Nannochloropsis gaditana

Overview
NameEWM26868.1
Unique Namecds3821
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:162933..163009 -
Alignment locationCM002462.1:160739..162731 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26868.1
ProductPentatricopeptide repeat containing protein
Orig transcript idgnl|cribi|Naga_100097g15.3759.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:162933..163009 -
CM002462.1supercontigCM002462.1:160739..162731 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
Homology
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|585108963|gb|EWM26868.1| (Pentatricopeptide repeat containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1417.52 bits (3668), Expect = 0.000e+0
Identity = 689/689 (100.00%), Postives = 689/689 (100.00%), Query Frame = 0
Query:    1 MQRFIALRKLAAGGFLTPVLSPHHGRYLSSIFSGNISPDDSAAPTLGQNTSRGTPMQEELRASPSPSPTVAASPPLPSAQTISINPSSSSEEQEKLFQQAALELGQAWKQAAGVKPGMARFERLLQGEDLDAMERCWRQTVGKERLNFWHVHTFLGLLLDDRFLNARPQSGAVPAEFEGGQKTGGKRGETLRRRLRLASSLFKDMVMQKIARERKAGGSPLEGGALNAAGATVSSDPDPTPQHWQRVYNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLISCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVLRQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHDRAQELLSGMHAQGCYVPSYFEERLKQIRLNGDRL 689
            MQRFIALRKLAAGGFLTPVLSPHHGRYLSSIFSGNISPDDSAAPTLGQNTSRGTPMQEELRASPSPSPTVAASPPLPSAQTISINPSSSSEEQEKLFQQAALELGQAWKQAAGVKPGMARFERLLQGEDLDAMERCWRQTVGKERLNFWHVHTFLGLLLDDRFLNARPQSGAVPAEFEGGQKTGGKRGETLRRRLRLASSLFKDMVMQKIARERKAGGSPLEGGALNAAGATVSSDPDPTPQHWQRVYNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLISCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVLRQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHDRAQELLSGMHAQGCYVPSYFEERLKQIRLNGDRL
Sbjct:    1 MQRFIALRKLAAGGFLTPVLSPHHGRYLSSIFSGNISPDDSAAPTLGQNTSRGTPMQEELRASPSPSPTVAASPPLPSAQTISINPSSSSEEQEKLFQQAALELGQAWKQAAGVKPGMARFERLLQGEDLDAMERCWRQTVGKERLNFWHVHTFLGLLLDDRFLNARPQSGAVPAEFEGGQKTGGKRGETLRRRLRLASSLFKDMVMQKIARERKAGGSPLEGGALNAAGATVSSDPDPTPQHWQRVYNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLISCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVLRQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHDRAQELLSGMHAQGCYVPSYFEERLKQIRLNGDRL 689          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|384496624|gb|EIE87115.1| (hypothetical protein RO3G_11826 [Rhizopus delemar RA 99-880])

HSP 1 Score: 87.4261 bits (215), Expect = 2.002e-14
Identity = 89/393 (22.65%), Postives = 168/393 (42.75%), Query Frame = 0
Query:  247 VYNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLISCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVL----RQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVV 635
             YN +++A  N  D    L + D MQ  G      T   ++ A  +  ++L  +  F+E  +KG+  +  + S LI    RA   + A ++L+   ++G     P      M   VL +G     + ++     + +   ++  D G  LQ+L +AAKRGD +LA DV   L   G+      F  +++A  +  + V+    L+ M   G  P+  ++  +  +LS     LD+AY+ L               E R+++++VD  D                      +++L       ++R F  + +    FG+  D +  NA+L  C++ R  ++  A  V+ EM +  ++PN +T   M+ +       + ++  + L  M E+G +
Sbjct:  120 TYNYIMKAFGNNKDTNAQLRLKDEMQNKGIELNGVTYIHLLEA-QQGNLQLALEI-FKEMKQKGIAPTVLSYSFLIGA-CRASSSDVAFKLLKEAEDNGL----PVDSQPRMYFNVLRLGTREDEIDIVTYCWNKAVGKYSLRPDEGTCLQVLRVAAKRGDSKLAKDVIRQLSTSGYPYKQHYFTPLMEAYLVKDDLVSAFNVLDIMRVSGVPPTIKSIQSLREKLSSDSKALDDAYDIL--------------KELRKKKKSVDIVDFN--------------------VLLLASVDNGDVERTFGIYRE-AAKFGVIPDVDTYNAVLEVCVKGRVNKMDRA--VIEEMKKANVSPNADTFAKMIEL--SCNRTNYEKAFNYLEEMKERGFL 466          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|384493379|gb|EIE83870.1| (hypothetical protein RO3G_08575 [Rhizopus delemar RA 99-880])

HSP 1 Score: 85.5001 bits (210), Expect = 8.118e-14
Identity = 117/514 (22.76%), Postives = 205/514 (39.88%), Query Frame = 0
Query:  210 IARERKAGGSPLEGGALNAAGATVSSDPDPTPQHWQRVYNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALA-------KARMRLEAQAR--------------------------FEEAVEKGLVLSPAAKSCLI-SCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVLRQGLN-ALT---MPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHD-RAQELLSGMHAQGCYVPSYFEERLKQIRL 684
            + R RK+    +    LN  G   S       ++    YN +L A A   D     E    M+E G S   ++ + ++ A         + R++ E Q +                           E+  ++G+  +    S LI SC A+A     A  +L+   E G + +N       M   VL +G      +++    N A+T   +  D G  LQ+L +AAK+GD +LA DV   L   G+      F  +++A  +  +  +    L+ M   G  P+   ++ +  +LSK +  +D+AY  L               E R+E++AVD                     +A  +++  CA A  L+R   T  + + + G+  D +  NA+L  C+++R  ++     V+ EM +  I+PN +T   M+ +       + +   S L  M E G++  P  +   +L   L  + D R   +L  M   G     Y+   + Q+RL
Sbjct:    7 LVRSRKSSPESVLKKVLNVVGEMNSQ----KLRYDLNTYNALLAAYARAKDQTNVTETLRKMEEEGVSPTTDSYNLIMEAFGNDKNIALQNRLKEEMQQKGIELNSVTYYHLLRGQQNNIELALETLEDMKKRGIEPTLLTYSLLIRSCRAKA--SNTAFALLKEAEEKGLAVQN----EPRMYFDVLRLGTRRDEYEMVNYCWNKAITEHSLRPDEGTCLQVLRVAAKKGDTKLATDVIRQLSTNGYPYKEHYFTPLMEAFLVKDDLKSAFNVLDIMRVSGVPPTMNAIYALREKLSKDIKTIDKAYYIL--------------EELRREKKAVD--------------------VTAFNVVIAACADAGDLERTIFTHREAENL-GVKPDVDTYNAILGVCIKARVDKMDKV--VIEEMKKANISPNIDTYIKMIEL--SCNRANYEEAFSYLETMKEYGIL--PPERCYALLARKLSHKKDPRFHLVLEEMETFGYKHKGYY---MNQVRL 466          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|1178053187|gb|ORE08709.1| (hypothetical protein BCV72DRAFT_303517 [Rhizopus microsporus var. microsporus])

HSP 1 Score: 84.3445 bits (207), Expect = 2.422e-13
Identity = 96/427 (22.48%), Postives = 175/427 (40.98%), Query Frame = 0
Query:  248 YNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLI-SCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVL----RQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHD-RAQELLSGMHAQG 668
            YNL+L A AN  D    L+    M++ G      +   ++      R+ LE    F E  ++GL  + ++ + LI +C       + A  +L+   E G     P     ++   ++ +   T  + V     ++ +N L++  D G  + +LN+AA++GD  LA DV   L   G+      F  +++A  +  +  +    L+ M   G  P+  +++ + ++LS S A +D+AY  L               E ++E++                    P+   A  ++V  CA A  + R   T+ +     G+  D +  NA+L  C+  R   +     V+ EM    + PN +T   M+ I ++ K  D ++    L  M +   +  P  +    L Y L   +D R   +L  M   G
Sbjct:  121 YNLILEAYANHRDVEVQLDWKKEMEQKGIEFNNISYYHLLRGQRNYRLALET---FNEMKQRGLTPTLSSYTLLIQNCPTE--QSKKAFELLKEVEESGM----PIASEPSLYFHMMRLAASTYELDVTSYCWKKAVNELSLRPDEGTCIGVLNVAARKGDTSLATDVIRQLSKNGYPYKEHYFTPLMEAFVVKDDLKSAFNVLDIMRISGVPPTMKSVYNLRKRLSTSTAMIDKAYFTL--------------EEMKKEKK--------------------PIDIVAFNVVVAACADAGDVVRTIGTYRE-AAKLGITPDIDTYNAILDVCINGRVEDMDNV--VITEMKNANVTPNVDTYVKMIEICSRRK--DFEQAFQYLEQMKDYNTL--PPERCYFTLAYNLSNRNDPRYHLVLEEMETLG 497          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|729702825|emb|CEJ00386.1| (hypothetical protein RMCBS344292_14442 [Rhizopus microsporus])

HSP 1 Score: 82.8037 bits (203), Expect = 6.100e-13
Identity = 96/427 (22.48%), Postives = 175/427 (40.98%), Query Frame = 0
Query:  248 YNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLI-SCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVL----RQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHD-RAQELLSGMHAQG 668
            YNL+L A AN  D    L     M++ G      +   ++      R+ LE    F E  ++GL  + ++ + LI +C       + A  +L+   E G     P     ++   ++ +   T  + V     ++ +N L++  D G  + +LN+AA++GD  LA DV   L   G+      F  +++A  +  +  +    L+ M   G  P+  +++ + ++LS S A +D+AY  L               E ++E++                    P+   A  ++V  CA A  + R   T+ +     G+  D +  NA+L  C+  R   +     V+ EM    + PN +T   M+ I ++ K  D ++    L  M +   +  P  +    L Y L  ++D R   +L  M   G
Sbjct:  121 YNLILEAYANHRDVEVQLAWKKEMEQKGIEFNNISYFHLLRGQRNYRLALET---FNEMKQRGLTPTLSSYTLLIQNCPTE--QSKKAFELLKEVEESGM----PIASEPSLYFHMMRLATSTYELDVTNYCWKKAVNELSLRPDEGTCIGVLNVAARKGDTSLATDVIRQLSKNGYPYKEHYFTPLMEAFVVKDDLKSAFNVLDIMRISGVPPTMKSVYNLRKRLSTSTAMIDKAYFTL--------------EEMKKEKK--------------------PIDIVAFNVVVAACADAGDVVRTIGTYRE-AAKLGITPDVDTYNAILDVCINGRVEDMDNV--VITEMKNANVTPNVDTYVKMIEICSRRK--DFEQAFQYLEQMKDYNTL--PPERCYFTLAYNLSNKNDPRYHLVLEEMETLG 497          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|727154655|emb|CEG63512.1| (hypothetical protein RMATCC62417_00643 [Rhizopus microsporus])

HSP 1 Score: 82.4185 bits (202), Expect = 8.243e-13
Identity = 96/427 (22.48%), Postives = 174/427 (40.75%), Query Frame = 0
Query:  248 YNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLI-SCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVL----RQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHD-RAQELLSGMHAQG 668
            YNL+L A AN  D    L     M++ G      +   ++      R+ LE    F E  ++GL  + ++ + LI +C       + A  +L+   E G     P     ++   ++ +   T  + V     ++ +N L++  D G  + +LN+AA++GD  LA DV   L   G+      F  +++A  +  +  +    L+ M   G  P+  +++ + ++LS S A +D+AY  L               E ++E++                    P+   A  ++V  CA A  + R   T+ +     G+  D +  NA+L  C+  R   +     V+ EM    + PN +T   M+ I ++ K  D ++    L  M +   +  P  +    L Y L   +D R   +L  M   G
Sbjct:  122 YNLILEAYANHRDVEVQLAWKKEMEQKGIEFNNISYFHLLRGQRNYRLALET---FNEMKQRGLTPTLSSYTLLIQNCPTE--QSKKAFELLKEVEESGM----PIASEPSLYFHMMRLATSTYELDVTNYCWKKAVNELSLRPDEGTCIGVLNVAARKGDTSLATDVIRQLSKNGYPYKEHYFTPLMEAFVVKDDLKSAFNVLDIMRISGVPPTMKSVYNLRKRLSTSTAMIDKAYFTL--------------EEMKKEKK--------------------PIDIVAFNVVVAACADAGDVVRTIGTYRE-AAKLGITPDVDTYNAILDVCINGRVEDMDNV--VITEMKNANVTPNVDTYVKMIEICSRRK--DFEQAFQYLEQMKDYNTL--PPERCYFTLAYNLSNRNDPRYHLVLEEMETLG 498          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|1178063765|gb|ORE18229.1| (hypothetical protein BCV71DRAFT_215453 [Rhizopus microsporus])

HSP 1 Score: 80.8777 bits (198), Expect = 2.787e-12
Identity = 98/428 (22.90%), Postives = 177/428 (41.36%), Query Frame = 0
Query:  248 YNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLI-SCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVL----RQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDV-AMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHD-RAQELLSGMHAQG 668
            YNL+L A AN  +    L     M++ G      +   ++      R+ LE    F E  ++GL  + ++ + LI +C       + A  +L+   E G     P     ++   ++ +   T  + V     ++ +N L++  D G  + +LN+AA++GD  LA DV   L   G+      F  +++A  + KND+ +    L+ M   G  P+  +++ + ++LS S A +D+AY  L               E ++E++                    P+   A  ++V  CA A  + R   T+ +     G+  D +  NA+L  C+  R   +     V+ EM    + PN +T   M+ I ++ K  D ++    L  M +   +  P  +    L Y L   +D R   +L  M   G
Sbjct:  122 YNLILEAYANHRNVEVQLAWKKEMEQKGIEFNNISYFHLLRGQRDYRLALET---FNEMKQRGLTPTLSSYTLLIQNCPTE--QSKKAFELLKEVEESGM----PIASEPSLYFHMMRLATSTYELDVTSYCWKKAVNELSLRPDEGTCIGVLNVAARKGDTSLATDVIRQLSKNGYPYKEHYFTPLMEAF-VVKNDLKSAFNVLDIMRISGVPPTMKSVYNLRKRLSTSTAMIDKAYFTL--------------EEMKKEKK--------------------PIDIVAFNVVVAACADAGDVVRTIGTYRE-AAKLGITPDVDTYNAILDVCINGRVEDMDNV--VITEMKNANVTPNVDTYVKMIEICSRRK--DFEQAFQYLEQMKDYNTL--PPERCYFTLAYNLSNRNDPRYHLVLEEMETLG 498          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|729697548|emb|CEJ05020.1| (hypothetical protein RMCBS344292_18968 [Rhizopus microsporus])

HSP 1 Score: 80.8777 bits (198), Expect = 2.861e-12
Identity = 98/428 (22.90%), Postives = 177/428 (41.36%), Query Frame = 0
Query:  248 YNLMLRACANIADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLI-SCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVL----RQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDV-AMLKALNEMCALGFTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDEKGVVLRPATQRLLILWYALLGEHD-RAQELLSGMHAQG 668
            YNL+L A AN  +    L     M++ G      +   ++      R+ LE    F E  ++GL  + ++ + LI +C       + A  +L+   E G     P     ++   ++ +   T  + V     ++ +N L++  D G  + +LN+AA++GD  LA DV   L   G+      F  +++A  + KND+ +    L+ M   G  P+  +++ + ++LS S A +D+AY  L               E ++E++                    P+   A  ++V  CA A  + R   T+ +     G+  D +  NA+L  C+  R   +     V+ EM    + PN +T   M+ I ++ K  D ++    L  M +   +  P  +    L Y L   +D R   +L  M   G
Sbjct:  122 YNLILEAYANHRNVEVQLAWKKEMEQKGIEFNNISYFHLLRGQRDYRLALET---FNEMKQRGLTPTLSSYTLLIQNCPTE--QSKKAFELLKEVEESGM----PIASEPSLYFHMMRLATSTYELDVTNYCWKKAVNELSLRPDEGTCIGVLNVAARKGDTSLATDVIRQLSKNGYPYKEHYFTPLMEAF-VVKNDLKSAFNVLDIMRISGVPPTMKSVYNLRKRLSTSTAMIDKAYFTL--------------EEMKKEKK--------------------PIDIVAFNVVVAACADAGDVVRTIGTYRE-AAKLGITPDVDTYNAILDVCINGRVEDMDNV--VITEMKNANVTPNVDTYVKMIEICSRRK--DFEQAFQYLEQMKDYNTL--PPERCYFTLAYNLSNRNDPRYHLVLEEMETLG 498          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|661189789|emb|CDH48648.1| (hypothetical protein RO3G_08575 [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 77.7962 bits (190), Expect = 2.787e-11
Identity = 91/339 (26.84%), Postives = 142/339 (41.89%), Query Frame = 0
Query:  303 FEEAVEKGLVLSPAAKSCLISCHARALDGEAAARVLEVTVEDGRSPE-NPGVVSGNMVTKVLEVGIETGNVKVLRQGLNALTMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGISKNDVAMLKALNEMCALGFTPSEGTLHLVARQL-SKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMVRILAQAKEVDVKRMESVLSHMDE-KGVVLRP 638
             E   + G+  + A    LI    R  D E A ++L+   E G + E NP +    M         E        + + AL M  D G  L +L +AA+ GD +LA  V   L   G+      F  +++A    K+  +    L+ M   G TP+  T  L+  +L S  V  +D AY  L  L+K          EGR+                        V  +A   I+  CA A  L+R  AT+ + + + G+A D +  N +L AC+R+R+  +G    V+ EM + G+ P+ +T   M+     A E   K  E   S+++E KG  + P
Sbjct:  204 LETMKQSGVTPNEACYVILIGACLRWQDPEMAFKLLQEAEESGVAVESNPRIYLDVMRATSWNNKYEMV-AYCWDKSVTALNMRPDEGTCLHVLGVAARAGDAKLATKVIRQLSTSGYPYKEHYFTPLMEAFVQKKDLKSAFNVLDIMRVSGVTPTSRTTLLIQERLRSGGVRAIDNAYYVLEELRK----------EGRK------------------------VDVTAFNAILGLCAEAADLERTVATYREAKHL-GVAPDIDTYNNVLEACVRTRTKGMGNV--VIEEMKKAGVTPDIQTYVKMI-----ALECTQKDYEGAFSYLEEMKGYGVVP 499          
BLAST of EWM26868.1 vs. NCBI_GenBank
Match: gi|971515755|dbj|GAQ82429.1| (pentatricopeptide repeat-containing protein [Klebsormidium nitens])

HSP 1 Score: 76.2554 bits (186), Expect = 1.215e-10
Identity = 89/387 (23.00%), Postives = 150/387 (38.76%), Query Frame = 0
Query:  248 YNLMLRACAN--IADGVCALEVWDHMQETGFSAGEETMSFVVMALAKARMRLEAQARFEEAVEKGLVLSPAAKSCLISCHARALDGEAAARVLEVTVEDGRSPENPGVVSGNMVTKVLEVGIETGNVKVLRQGLNAL---TMPVDRGMGLQILNMAAKRGDGQLAMDVFYALEGWGFSPTASVFNAVIQALGI---SKNDVAMLKALNEMCALG------------------FTPSEGTLHLVARQLSKSVARLDEAYNNLVALQKAYQDHVRQEAEGRQEQQAVDGKDGEGADPAFVPNAPLPVSGSAVYLIVLGCAYANQLDRAFATFEDYQPVFGLAYDTNASNALLLACLRSRSLQVGAAISVMNEMDRLGIAPNDETCHLMV 608
            YN +L+       A+   A E+ D MQE G +   +T +   +  +  +  + A     E + KGL+  P     ++  H R++ GE + R  E              +   MV +VL   I+  + K     +N L   +  +D G     L+ AA+RGD  L    +  L      P+ +   A + AL +   S+  + + +   E+  L                     P++    L+AR LS+ +  LD+AY  L  +  A Q                                 +P+ G  +  I+ GC     + RAF TF++ Q  F L  D ++ NA+L  C ++R  QV A +     M+  G+  N  +  L+V
Sbjct:  405 YNTLLKVALQDEFANAKAATELVDEMQELGVAPDHDTYNTAALVCSWGKYSMTAHRYVTEMLAKGLMPPPRTLQEVLISHIRSI-GEGSKRTEEAGALLKVMLAQDIAIKTFMVQEVLTACIDQDDAKTAALCINLLHKRSHVLDEGTLTAALHTAARRGDVDLMQLAWAGLLKAVGEPSPAAHLARLHALTVPRPSQGGIPLERLFQELAQLEESLGPRLAEMDPEEADLVLDPAKSYKWLIAR-LSRRLKALDKAYYVLTVMHDAGQR--------------------------------VPLLG--LNCIIQGCVNVRDMSRAFQTFDEIQRTFKLEPDVHSYNAILDGCGQAR--QVAATVRTFELMEASGVTSNKRSWELLV 753          
The following BLAST results are available for this feature:
BLAST of EWM26868.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108963|gb|EWM26868.1|0.000e+0100.00Pentatricopeptide repeat containing protein [Nanno... [more]
gi|384496624|gb|EIE87115.1|2.002e-1422.65hypothetical protein RO3G_11826 [Rhizopus delemar ... [more]
gi|384493379|gb|EIE83870.1|8.118e-1422.76hypothetical protein RO3G_08575 [Rhizopus delemar ... [more]
gi|1178053187|gb|ORE08709.1|2.422e-1322.48hypothetical protein BCV72DRAFT_303517 [Rhizopus m... [more]
gi|729702825|emb|CEJ00386.1|6.100e-1322.48hypothetical protein RMCBS344292_14442 [Rhizopus m... [more]
gi|727154655|emb|CEG63512.1|8.243e-1322.48hypothetical protein RMATCC62417_00643 [Rhizopus m... [more]
gi|1178063765|gb|ORE18229.1|2.787e-1222.90hypothetical protein BCV71DRAFT_215453 [Rhizopus m... [more]
gi|729697548|emb|CEJ05020.1|2.861e-1222.90hypothetical protein RMCBS344292_18968 [Rhizopus m... [more]
gi|661189789|emb|CDH48648.1|2.787e-1126.84hypothetical protein RO3G_08575 [Lichtheimia corym... [more]
gi|971515755|dbj|GAQ82429.1|1.215e-1023.00pentatricopeptide repeat-containing protein [Klebs... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3830rna3830Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications