EWM26849.1, cds3817 (CDS) Nannochloropsis gaditana

Overview
NameEWM26849.1
Unique Namecds3817
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:153671..153683 +
Alignment locationCM002462.1:153793..153915 +
Alignment locationCM002462.1:154195..154388 +
Alignment locationCM002462.1:154729..154776 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26849.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100097g11.3740.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:153671..153683 +
CM002462.1supercontigCM002462.1:153793..153915 +
CM002462.1supercontigCM002462.1:154195..154388 +
CM002462.1supercontigCM002462.1:154729..154776 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26849.1 vs. NCBI_GenBank
Match: gi|585108944|gb|EWM26849.1| (hypothetical protein Naga_100097g11 [Nannochloropsis gaditana])

HSP 1 Score: 261.151 bits (666), Expect = 2.131e-88
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MINAFLRDSVVYQWHRSLSLSVGGTFISKPFTRHIGLLPVEDHNYDAVPCQLSLFFYGPDPCADPSHALSSRVPRLAFHEQARNTGISDQNLRFERPQGDDCQHGRTAQKDHGLPADTPIQTPGL 125
            MINAFLRDSVVYQWHRSLSLSVGGTFISKPFTRHIGLLPVEDHNYDAVPCQLSLFFYGPDPCADPSHALSSRVPRLAFHEQARNTGISDQNLRFERPQGDDCQHGRTAQKDHGLPADTPIQTPGL
Sbjct:    1 MINAFLRDSVVYQWHRSLSLSVGGTFISKPFTRHIGLLPVEDHNYDAVPCQLSLFFYGPDPCADPSHALSSRVPRLAFHEQARNTGISDQNLRFERPQGDDCQHGRTAQKDHGLPADTPIQTPGL 125
The following BLAST results are available for this feature:
BLAST of EWM26849.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108944|gb|EWM26849.1|2.131e-88100.00hypothetical protein Naga_100097g11 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3826rna3826Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications