EWM26862.1, cds3811 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|585108957|gb|EWM26862.1| (Uncharacterized protein family UPF0047 [Nannochloropsis gaditana]) HSP 1 Score: 587.415 bits (1513), Expect = 0.000e+0 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query: 1 MALRSTTLPFITLLLFAYVGVSTFAFITSTKSFKQPLSPLPRLPTTITTTLLAHGHLQAALQLIHDTHSSISSVPSDQYHPPSPALEVHRASLPDPDVVDTTGTGEKVSFGAQHTKKHTGPSVTSYLEISLPTKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVGYE 287
MALRSTTLPFITLLLFAYVGVSTFAFITSTKSFKQPLSPLPRLPTTITTTLLAHGHLQAALQLIHDTHSSISSVPSDQYHPPSPALEVHRASLPDPDVVDTTGTGEKVSFGAQHTKKHTGPSVTSYLEISLPTKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVGYE
Sbjct: 1 MALRSTTLPFITLLLFAYVGVSTFAFITSTKSFKQPLSPLPRLPTTITTTLLAHGHLQAALQLIHDTHSSISSVPSDQYHPPSPALEVHRASLPDPDVVDTTGTGEKVSFGAQHTKKHTGPSVTSYLEISLPTKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVGYE 287
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|255073395|ref|XP_002500372.1| (predicted protein [Micromonas commoda] >gi|226515635|gb|ACO61630.1| predicted protein [Micromonas commoda]) HSP 1 Score: 213.386 bits (542), Expect = 2.393e-65 Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 0
Query: 112 AQHTKKHTGPSVTSYLEISLPTKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVG 285
A + + + SV Y ++SL T GISLHDITPQ+R+A+RESGV G V+++SRHTTTAVTINE E RLMDDIRQ++LKLAPP PYLHNDIHLR + GG + WRAQEP+N H+HLLS+L+GNTL VPV G+L IG WQS+M+VELDG R+RTVG+QV G
Sbjct: 7 ASYRRDNVVESVFEYTQLSLDTSLGISLHDITPQVRRAIRESGVTNGTVNVLSRHTTTAVTINEAEGRLMDDIRQYMLKLAPPGDPYLHNDIHLRDGPPD-----WPGGN----DAWRAQEPRNAHSHLLSILIGNTLAVPVVDGELAIGTWQSLMLVELDGPRKRTVGVQVCG 171
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|302847403|ref|XP_002955236.1| (hypothetical protein VOLCADRAFT_106701 [Volvox carteri f. nagariensis] >gi|300259528|gb|EFJ43755.1| hypothetical protein VOLCADRAFT_106701 [Volvox carteri f. nagariensis]) HSP 1 Score: 196.438 bits (498), Expect = 2.038e-59 Identity = 96/160 (60.00%), Postives = 126/160 (78.75%), Query Frame = 0
Query: 125 SYLEISLP-TKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQV 283
+Y ++ +P T GI+L DITPQ+R+ V ++G++EG VH++SRHTTTA+TINE E+RL+DD+RQFL +LAPP PYLHND+HLRPA + + G W + W AQEP+N H+HLLSMLLGNTL VPV+GGKL +G WQSVM+VELDG R R+VG+Q+
Sbjct: 24 NYHQLEVPQTPPGIALIDITPQIRELVAQAGLMEGCVHVLSRHTTTALTINENEARLLDDVRQFLARLAPPTDPYLHNDLHLRPAPD------SWPGGWAA---WAAQEPRNAHSHLLSMLLGNTLTVPVTGGKLALGTWQSVMLVELDGPRPRSVGVQL 174
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|551639420|ref|XP_005822519.1| (hypothetical protein GUITHDRAFT_79753, partial [Guillardia theta CCMP2712] >gi|428166566|gb|EKX35539.1| hypothetical protein GUITHDRAFT_79753, partial [Guillardia theta CCMP2712]) HSP 1 Score: 190.274 bits (482), Expect = 1.868e-57 Identity = 88/154 (57.14%), Postives = 120/154 (77.92%), Query Frame = 0
Query: 137 ISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWE-----SVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVG 285
IS+ DITP++++ ++ SG+ G+V+++SRHTTTAV INE ESRL+ D++ + LK+APP YLHN+IHLRP ++EDKRRV W+ +E WR+QEP N H+HLLSM+LGN+ +PVS G+L IG+WQSVM+V+LDG R+RTVGIQV G
Sbjct: 1 ISVWDITPEIKELIKTSGMKNGFVNVISRHTTTAVMINEYESRLIKDLKDYFLKIAPPDAKYLHNEIHLRPETQEDKRRVLLNN-WDINDPAVLEAWRSQEPFNAHSHLLSMMLGNSESIPVSNGELAIGQWQSVMLVDLDGPRKRTVGIQVFG 153
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|159472955|ref|XP_001694610.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158276834|gb|EDP02605.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 186.808 bits (473), Expect = 3.972e-56 Identity = 91/153 (59.48%), Postives = 113/153 (73.86%), Query Frame = 0
Query: 133 TKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVG 285
T GI+L D+TPQ+R+ V +SG+VEG V+++SRHTTTAVTINE E+RLMDD+RQFL KLAP PYLHND+HLRPA E+ EPQN H+HLLSM+LGNTL +PVSG +L +G WQSV++VELDG R RTVG+Q+ G
Sbjct: 11 TPPGIALVDVTPQIRELVSQSGLVEGTVNVLSRHTTTAVTINENETRLMDDVRQFLSKLAPASAPYLHNDLHLRPAPED-------------------CEPQNAHSHLLSMVLGNTLAIPVSGSRLALGTWQSVLLVELDGPRPRTVGVQLTG 144
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|552846952|ref|XP_005851746.1| (hypothetical protein CHLNCDRAFT_18455 [Chlorella variabilis] >gi|307111410|gb|EFN59644.1| hypothetical protein CHLNCDRAFT_18455 [Chlorella variabilis]) HSP 1 Score: 186.422 bits (472), Expect = 7.183e-56 Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = 0
Query: 127 LEISLPTKSGISLHDITPQLR--QAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVGYE 287
+++ L TK GI + DITPQ R QA R GV EG+V+I+SRHTTTA+ INECE+RL+DDIRQFL KLAPP PYLHND+ R A + G WE+ AQEP+N H+HLLSM+LGN+ VP++GG+L +G WQSVM+VELDG R RTVG+QVVG +
Sbjct: 1 MQLELETKPGIHIVDITPQARGLQAAR-LGVAEGFVNILSRHTTTAIAINECEARLLDDIRQFLRKLAPPNEPYLHNDLQYREAPPDWP------GGWEAA----AQEPENAHSHLLSMVLGNSETVPITGGRLALGTWQSVMLVELDGARTRTVGVQVVGTQ 152
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|612395702|ref|XP_007513371.1| (protein of unknown function UPF0047 [Bathycoccus prasinos] >gi|412993396|emb|CCO16929.1| protein of unknown function UPF0047 [Bathycoccus prasinos]) HSP 1 Score: 182.956 bits (463), Expect = 1.641e-53 Identity = 89/164 (54.27%), Postives = 118/164 (71.95%), Query Frame = 0
Query: 124 TSYLEISL-PTKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWE-SVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVG 285
TSY ++L T+ GI+ D+ + + ++G+ G V + SRHTTTAVTINE E RL+DD RQFLLKL PP YPYLHND+H+R ++D+ W+ +VEEWRAQEP N H+HL++MLLG ++ VP+ GK+ +G WQS++ VELDGERERTVGIQV G
Sbjct: 69 TSYETVNLGKTQHGIAFTDLNNICNEMIAKNGIKNGQVVVHSRHTTTAVTINEYEERLVDDARQFLLKLVPPLYPYLHNDLHVRFPPDDDR--------WKGTVEEWRAQEPLNAHSHLIAMLLGQSVTVPICDGKMTLGTWQSILFVELDGERERTVGIQVSG 224
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|553189829|ref|XP_005855082.1| (hypothetical protein NGA_2056300, partial [Nannochloropsis gaditana CCMP526] >gi|422293979|gb|EKU21279.1| hypothetical protein NGA_2056300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 175.637 bits (444), Expect = 1.535e-52 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 135 SGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVA 217
SGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVA
Sbjct: 5 SGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVA 87
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|693499388|emb|CEF98202.1| (Uncharacterised protein family UPF0047 [Ostreococcus tauri]) HSP 1 Score: 176.792 bits (447), Expect = 1.769e-51 Identity = 94/165 (56.97%), Postives = 114/165 (69.09%), Query Frame = 0
Query: 123 VTSYLEISLPTK-SGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEE-WRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVG 285
V Y I L T GI D++ + +A+ +GV EG VH++SRHTTTAVTINE E RL+DD R +L +LAP YLHND+ D+RR A +W +E WRAQEP+NCH+HLLSML+GN+ VVPVS GK +G WQSVM VELDG RERTVGIQVVG
Sbjct: 48 VYRYETIDLGTTLGGIDFKDLSEHIDRAIERAGVREGAVHVISRHTTTAVTINENEERLIDDARMYLSRLAPADDFYLHNDL--------DRRRGPA--DWPGGDEAWRAQEPRNCHSHLLSMLIGNSAVVPVSEGKTTLGTWQSVMFVELDGPRERTVGIQVVG 202
BLAST of EWM26862.1 vs. NCBI_GenBank
Match: gi|145347359|ref|XP_001418136.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144578365|gb|ABO96429.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 170.629 bits (431), Expect = 2.353e-49 Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 0
Query: 122 SVTSYLEISLP-TKSGISLHDITPQLRQAVRESGVVEGWVHIVSRHTTTAVTINECESRLMDDIRQFLLKLAPPQYPYLHNDIHLRPASEEDKRRVAAGGEWESVEEWRAQEPQNCHAHLLSMLLGNTLVVPVSGGKLKIGRWQSVMMVELDGERERTVGIQVVG 285
+V +Y I+L T +G D+T + AV +SGV G VH++SRHTTTAVTINE E+RLMDD R + KLAP YLHND+ R + GG+ E WRAQEP+NCHAHLLSM++GN+ +PVS GK +G WQS M VELDG RERTVGIQVVG
Sbjct: 27 TVYAYETIALGRTLTGTHFIDLTEHIDAAVAKSGVKNGVVHVLSRHTTTAVTINENEARLMDDARMYFAKLAPATDFYLHNDLDRRSGPAD-----WPGGD----EAWRAQEPENCHAHLLSMVIGNSETIPVSEGKTTLGTWQSCMFVELDGPRERTVGIQVVG 182 The following BLAST results are available for this feature:
BLAST of EWM26862.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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