EWM26870.1, cds3803 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|585108968|gb|EWM26870.1| (glutamate synthase, partial [Nannochloropsis gaditana]) HSP 1 Score: 290.812 bits (743), Expect = 1.700e-99 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 Query: 1 MLRLLSAGRTGSLVSSVSSGARLQASAAILARPRPGYGISNKSLGNTRLITAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 MLRLLSAGRTGSLVSSVSSGARLQASAAILARPRPGYGISNKSLGNTRLITAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG Sbjct: 1 MLRLLSAGRTGSLVSSVSSGARLQASAAILARPRPGYGISNKSLGNTRLITAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|1200365489|gb|OUU84716.1| (hypothetical protein CBC36_11780, partial [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 130.183 bits (326), Expect = 2.574e-36 Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 0 Query: 50 ITAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 AFP+ GLY+ A E+DSCGVG VA++K QIV+DA EMLVRM HRGGCGCEPNTGDGAG+L+GLP+ FLRKV K++LG LP G++ G Sbjct: 3 FKAFPKKHGLYDPAYEKDSCGVGFVANMKGVPDHQIVLDALEMLVRMEHRGGCGCEPNTGDGAGILIGLPEGFLRKVAKSDLGLELPAKGQFGAG 97
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|1200370973|gb|OUU89956.1| (glutamate synthase large subunit [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 132.109 bits (331), Expect = 6.424e-33 Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 0 Query: 50 ITAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 AFP+ GLY+ A E+DSCGVG VA++K QIV+DA EMLVRM HRGGCGCEPNTGDGAG+L+GLP+ FLRKV K++LG LP G++ G Sbjct: 3 FKAFPKKHGLYDPAYEKDSCGVGFVANMKGVPDHQIVLDALEMLVRMEHRGGCGCEPNTGDGAGILIGLPEGFLRKVAKSDLGLELPAKGQFGAG 97
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|299470149|emb|CBN78177.1| (Glutamate synthase (NADH/NADPH-dependent), N-terminal part [Ectocarpus siliculosus]) HSP 1 Score: 125.176 bits (313), Expect = 2.944e-32 Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 0 Query: 58 GLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 GLY+ A E+DSCGVGL +K ASRQIVVDANEMLVRM+HRG CGCE NTGDGAG+LV +PD FLRK + LPP G+YAVG Sbjct: 73 GLYDPALEKDSCGVGLAVQMKSVASRQIVVDANEMLVRMTHRGACGCEENTGDGAGILVAVPDGFLRKAAQEAGIGELPPEGEYAVG 159
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|1200399475|gb|OUV17214.1| (glutamate synthase large subunit [Euryarchaeota archaeon TMED99]) HSP 1 Score: 129.798 bits (325), Expect = 4.049e-32 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 0 Query: 53 FPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 P+ QGLY+ ANE+DSCGVG VA+LK S Q V+DA +MLV M HRGGCGCEPNTGDGAG+LVGLP++FLRKV + +LG LP G++ G Sbjct: 9 LPQKQGLYDPANEKDSCGVGFVANLKGLPSHQNVLDALQMLVNMEHRGGCGCEPNTGDGAGILVGLPENFLRKVAQEDLGVELPAKGRFGAG 100
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|502875972|ref|WP_013110948.1| (glutamate synthase subunit alpha [Planctopirus limnophila] >gi|296015278|gb|ADG68517.1| Glutamate synthase (NADH) [Planctopirus limnophila DSM 3776]) HSP 1 Score: 127.872 bits (320), Expect = 1.893e-31 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 54 PETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 P+ GLY+ ANE DSCGVG VAH+K + S QIVVDA+ +L MSHRG CGCE NTGDGAGML G+P FL++VV+ +L LPP G++ +G Sbjct: 60 PKAHGLYDPANEHDSCGVGFVAHIKGQKSHQIVVDADRILRHMSHRGACGCEENTGDGAGMLTGIPYQFLKRVVRKDLSAELPPEGRFGIG 150
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|1057559058|ref|WP_068852761.1| (glutamate synthase subunit alpha [Planctopirus sp. JC280] >gi|1055860486|gb|ODA28325.1| glutamate synthase subunit alpha [Planctopirus sp. JC280]) HSP 1 Score: 127.872 bits (320), Expect = 2.002e-31 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 54 PETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 P+ GLY+ ANE DSCGVG VAH+K + S QIVVDA+ +L MSHRG CGCE NTGDGAGML G+P FL++VV+ +L LPP G++ +G Sbjct: 8 PKAHGLYDPANEHDSCGVGFVAHIKGQKSHQIVVDADRILRHMSHRGACGCEENTGDGAGMLTGIPYQFLKRVVRKDLSAELPPEGRFGIG 98
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|552847533|ref|XP_005851884.1| (hypothetical protein CHLNCDRAFT_33619 [Chlorella variabilis] >gi|307111548|gb|EFN59782.1| hypothetical protein CHLNCDRAFT_33619 [Chlorella variabilis]) HSP 1 Score: 127.487 bits (319), Expect = 2.803e-31 Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 0 Query: 51 TAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 +A PE QGL+N N++DSCGVG VA L K+ R+ V +A EML RMSHRG CGCE NTGDGAG+LV +P FL VV+ E G LPPLG YAVG Sbjct: 8 SAIPEAQGLFNPENDKDSCGVGFVAELSKEPQRKTVTEALEMLKRMSHRGACGCEVNTGDGAGILVAIPHLFLSMVVEKECGIELPPLGDYAVG 101
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|1099564770|emb|SFH85495.1| (glutamate synthase (NADPH/NADH) large chain [Planctomicrobium piriforme]) HSP 1 Score: 127.102 bits (318), Expect = 3.548e-31 Identity = 58/95 (61.05%), Postives = 68/95 (71.58%), Query Frame = 0 Query: 50 ITAFPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 +T FPE QGLY+ E DSCGVG VAH+K + S QI++DA+ + M+HRG CGCE NTGDGAG+L LPD FLRKV K ELG LP GKY G Sbjct: 4 LTGFPEDQGLYSSEFEHDSCGVGFVAHIKGQPSHQIILDADRINRHMTHRGACGCEENTGDGAGILTALPDKFLRKVAKAELGIDLPAKGKYGAG 98
BLAST of EWM26870.1 vs. NCBI_GenBank
Match: gi|1015451240|gb|AMV33023.1| (Ferredoxin-dependent glutamate synthase 1 [Pirellula sp. SH-Sr6A]) HSP 1 Score: 126.716 bits (317), Expect = 5.646e-31 Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 0 Query: 53 FPETQGLYNKANERDSCGVGLVAHLKKKASRQIVVDANEMLVRMSHRGGCGCEPNTGDGAGMLVGLPDHFLRKVVKNELGKSLPPLGKYAVG 144 FPE GLY+ E+DSCGVG VAH+K + S QIVVDA+ +L M HRG CGCE NTGDGAG+LVG+PD F+R++ K E LP +G Y+VG Sbjct: 7 FPEKNGLYDPELEKDSCGVGFVAHIKGQPSHQIVVDADTILKNMDHRGACGCEANTGDGAGILVGMPDKFVRRIAKEEFDVELPQVGFYSVG 98 The following BLAST results are available for this feature:
BLAST of EWM26870.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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